EBG00000313325 - n.480G>C


Drug resistance types
63 Sensitive 30 RR-TB 42 HR-TB 34 MDR-TB 17 Pre-XDR-TB 1 XDR-TB 107 Other
lineage Counts
lineage Count
lineage4.1.1.3 7
lineage4.9 121
lineage2.2.1 33
lineage4.8.1 4
lineage4.3.3 6
lineage2.2.2 5
lineage4.1.2;lineage4.9 1
lineage4.1.2.1 8
lineage4.3.4.2 3
lineage4.8 14
lineage6.1.2 1
lineage2.2;lineage4 1
lineage4.3.2.1 4
lineage6.1.3 1
lineage3 6
lineage2.2.1.1 2
lineage4.4.2 3
La1.8.1 8
lineage3.1.2.2 1
La1;lineage4.9 2
lineage1.2.1.2 1
lineage4.2.1 4
La1.3 3
lineage2;lineage4.9 1
lineage6 1
lineage3.1.1 2
lineage4.3.2 1
La1.2 1
lineage4.2.2.2 2
lineage4.4.1.2 1
lineage1.1.1 2
La1;lineage4.1.2 1
lineage2.2.1;lineage4.9 3
lineage4.4.1.1.1 4
lineage4.7 1
lineage4.1.2.1;lineage4.4.1 1
lineage4.1.1.3;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.1.2 2
lineage2.2;lineage4.9 1
lineage4.4 1
lineage4 4
lineage4.3.4.2.1 1
lineage4.3.3;lineage4.8 1
lineage3;lineage4 1
lineage4.4.1.1 2
M.canetti;lineage4.9 1
lineage1.1.3.1 2
lineage1.1.2;lineage6.2.3 1
La1.4 1
La1.6 1
lineage4.1.1.1 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
La2 1
lineage4.5 1
lineage1.2.2.2 1
lineage4.1.2.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.7;lineage4.9 1
lineage1.1.1.1 1
lineage4.2;lineage4.9 1
lineage1.1.3.3 1
spoligotype Counts
spoligotype Count
None 294
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4819175 Other lineage4.1.1.3 gb
SRR5818414 Other lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR5818470 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1180300 Sensitive lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR5818400 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180440 Other lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR5818394 Other lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
ERR4822138 Other lineage4.1.2.1 None
ERR9786592 Other lineage4.3.4.2 None
ERR10796564 Other lineage4.3.3 None
SRR6982239 Sensitive lineage4.1.1.3 None
SAMEA3501073 RR-TB lineage4.8 None
SRR6046141 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR9787033 Sensitive lineage6.1.2 None
ERR2027257 Other lineage4.1.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR1175487 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR3283030 HR-TB lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR1063855 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR20969542 Other lineage4.4.2 None
SRR12708414 HR-TB lineage2.2.1 None
SRR7236177 Other La1.8.1 None
SRR5818386 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR26159063 RR-TB lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR6511621 HR-TB lineage4.9 None
SRR11342653 MDR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
ERR867572 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR20969475 Other lineage1.2.1.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR5818464 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
SRR1180946 Sensitive lineage2;lineage4.9 None
DRR184982 Other lineage2.2.1 None
ERR978767 RR-TB lineage4.8 None
ERR4769552 Sensitive La1.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR9787362 Sensitive lineage6 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4818272 Other lineage4.3.2 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR10809074 HR-TB lineage4.9 None
SRR1173281 Other lineage3 None
SRR12416842 HR-TB lineage4.9 None
ERR9119120 Other lineage4.8 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
ERR4811101 Other lineage4.4.2 None
ERR4769418 Other La1.2 None
SRR7236330 Other La1.8.1 None
SRR1180444 Sensitive lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR21677886 Sensitive lineage4.9 None
SRR21658550 Other lineage1.1.1 None
SRR1180391 Sensitive lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR1196478 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR1180410 Sensitive lineage4.9 None
SRR5818452 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR6045359 HR-TB lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR22424765 HR-TB lineage4.8 None
SRR5818428 Sensitive lineage4.9 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR867566 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1181256 Other lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR13180204 Other lineage3 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR7617847 Other La1.8.1 None
SRR1181402 Sensitive lineage4.9 None
ERR10796633 Other lineage4.3.4.2 None
ERR867575 Other lineage4.9 None
SRR21727760 Other lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR11342682 Other lineage4.1.2 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR3275709 HR-TB lineage3 nl
SRR5818399 Sensitive lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR4769514 Other La1.3 None
ERR2229198 Sensitive lineage4.8 None
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR1181283 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR5818410 Sensitive lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR6855695 Sensitive lineage4.8 None
SRR10315567 HR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR400326 Other lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR1172807 Sensitive lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR3273109 HR-TB lineage4 None
SRR1173740 Other lineage3;lineage4 None
SRR5818389 Other lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR1184308 RR-TB lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR867567 RR-TB lineage3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR4812155 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
ERR2851356 Sensitive lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
DRR185024 Other lineage2.2.2 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR4769516 Sensitive lineage4.9 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR9971122 MDR-TB lineage4.8 None
SRR6045191 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
SRR12708419 Other lineage4.3.3 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR5818397 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR10993951 RR-TB La1.6 None
SRR1181403 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4769530 RR-TB lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR4819357 Sensitive lineage4.9 None
SRR26159065 Other lineage4.9 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR6045010 Sensitive lineage4.9 None
SRR13423649 Other lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1180375 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR5818462 Other lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR1180420 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR11462861 Other La1.8.1 None
SRR16156804 Sensitive lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR1791747 Other La1.8.1 None
SRR6045832 Other lineage4.9 None
DRR184629 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
ERR10219876 Other lineage4.3.4.2 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR4819314 HR-TB lineage1.1.1 None
SRR5818435 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR5908124 Other lineage4.8 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR867574 Other lineage4.9 None
ERR4818536 Other lineage4.9 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR12708415 HR-TB lineage2.2.1 None
SRR5818423 RR-TB lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR400345 Other lineage4.9 None
ERR5087596 Other La1.8.1 None
ERR978765 RR-TB lineage4.8 None
ERR4798823 HR-TB lineage4 None
ERR3797019 Other La1.8.1 None
SRR6046250 Other lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR3675245 Other lineage4.1.2.1 None
SRR13888750 Other La2 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR18003031 HR-TB lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR3283032 Other lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR5818391 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR6046376 Other lineage3 None
SRR1180250 Other lineage4.9 None
SRR5818466 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR21240161 Sensitive lineage4.1.2.1 None
SRR5818398 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR5818424 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR867540 MDR-TB lineage2.2.1 None
SRR7236399 Other La1.8.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
SRR5818458 Other lineage4.9 None
SRR5818441 Other lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR5818425 Other lineage4.9 None
DRR185000 Other lineage1.1.1.1 None
SRR5818408 Other lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR5818459 Other lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR867571 Other lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR3283018 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
SRR9971168 Other lineage4.3.2.1 None
ERR4819863 RR-TB lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
SRR5818445 Other lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR2515230 Sensitive lineage4.8 None