EBG00000313325 - n.480G>C
Drug resistance types
76 Sensitive
26 RR-TB
35 HR-TB
30 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
108 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 121 |
| lineage4.8 | 14 |
| La1.2 | 1 |
| lineage4.2.1 | 4 |
| La1;lineage4.9 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.1 | 32 |
| lineage4.1.2.1 | 8 |
| lineage4.3.3;lineage4.8 | 1 |
| La1.6 | 1 |
| La1.8.1 | 8 |
| lineage4.3.4.2 | 3 |
| lineage2.2.2 | 5 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3 | 7 |
| lineage4.2.2.2 | 2 |
| lineage4.4.1.1 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.1.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 4 |
| lineage6.1.3 | 1 |
| lineage4 | 4 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.3 | 3 |
| lineage6 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.4.1.1.1 | 4 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.3 | 6 |
| lineage4.8.1 | 4 |
| lineage2.2.1.1 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.5 | 1 |
| lineage3 | 6 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.1.1.1 | 2 |
| lineage1.2.2.2 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.4.2 | 2 |
| lineage4.7 | 1 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.3.2 | 1 |
| lineage6.1.2 | 1 |
| lineage4.4 | 1 |
| La2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3;lineage4 | 1 |
| La1;lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 292 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181402 | Sensitive | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR4769418 | Other | La1.2 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR26159065 | Other | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR7236399 | Other | La1.8.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR6358979 | Other | lineage4.9 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR5818432 | MDR-TB | lineage4.9 | None | ERR5908124 | Other | lineage4.8 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR867574 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818445 | Other | lineage4.9 | None | ERR5087596 | Other | La1.8.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR5818386 | Other | lineage4.9 | None | SRR26159063 | RR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR9787362 | Sensitive | lineage6 | None | ERR4812155 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | DRR185024 | Other | lineage2.2.2 | None | SRR5818425 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR5818398 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR5818452 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR7236177 | Other | La1.8.1 | None | SRR6045832 | Other | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR13180204 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR7617847 | Other | La1.8.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR867575 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR5818460 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | SRR5818458 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818441 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR4769514 | Other | La1.3 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR1173281 | Other | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR5818389 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR5818414 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR5818394 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | DRR184982 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR5818400 | Other | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5818435 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR3797019 | Other | La1.8.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR3283032 | Other | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR6046376 | Other | lineage3 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR9119120 | Other | lineage4.8 | None | ERR867566 | Other | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4769516 | Sensitive | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR5818408 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None |
|---|
