SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR5341465
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9971113
|
Other
|
lineage2.2.1
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR10315551
|
Sensitive
|
lineage2.2.1
|
None
|
ERR212114
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR1034647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR1183965
|
Sensitive
|
lineage4.9
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR9971270
|
RR-TB
|
lineage2.2.1
|
None
|
SRR16156804
|
Sensitive
|
lineage4.9
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR11462861
|
Other
|
La1.8.1
|
None
|
SRR28351554
|
Sensitive
|
La1.6;lineage4
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
SRR1140736
|
Other
|
lineage4.1.2.1
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR4818710
|
Sensitive
|
lineage4.9
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4818646
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR22424765
|
HR-TB
|
lineage4.8
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
SRR10315466
|
RR-TB
|
lineage2.2.1
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
ERR176741
|
Other
|
lineage4.9
|
None
|
ERR3275941
|
RR-TB
|
lineage4.3
|
nl
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR4798099
|
Other
|
lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
SRR16156775
|
Other
|
lineage4.9
|
None
|
ERR4816964
|
Sensitive
|
lineage4.9
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
SRR1180148
|
Sensitive
|
lineage4.9
|
None
|
ERR4816548
|
HR-TB
|
lineage4.5
|
None
|
SRR16156188
|
Sensitive
|
lineage4.9
|
None
|
SRR21469201
|
Other
|
La1.7.1
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
ERR485006
|
HR-TB
|
lineage4.9
|
None
|
ERR4820030
|
Other
|
lineage4.9
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR4813263
|
MDR-TB
|
lineage4.8
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
ERR4817554
|
Other
|
lineage1.1.1
|
None
|
SRR3675246
|
Other
|
lineage4.9
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR9970979
|
Sensitive
|
lineage4.8
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR323085
|
Sensitive
|
lineage4.9
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR1062871
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
SRR6785281
|
Other
|
lineage4.2.1.1
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
SRR1062918
|
Other
|
lineage3
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
SRR5341412
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR5341387
|
Other
|
lineage4.9
|
None
|
SRR1049559
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
ERR4817915
|
Other
|
lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
ERR4819314
|
Other
|
lineage1.1.1
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
ERR137286
|
Other
|
lineage4.9
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
ERR4808964
|
RR-TB
|
lineage2.2.1
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
ERR4809333
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR036207
|
Other
|
lineage4.3;lineage4.9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR9119733
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1172717
|
Sensitive
|
lineage4.9
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2513259
|
Other
|
lineage3
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
SRR5341425
|
Other
|
lineage4.9
|
None
|
SRR3675235
|
Sensitive
|
lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR5341366
|
Sensitive
|
lineage4.9
|
None
|
ERR970449
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR502479
|
RR-TB
|
lineage4.9
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
SRR1049581
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
ERR3439489
|
RR-TB
|
La1.8.1
|
None
|
ERR5987263
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5341303
|
Sensitive
|
lineage4.9
|
None
|
ERR4799378
|
Sensitive
|
lineage4.9
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
SRR8758877
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR1173185
|
Other
|
lineage4.9
|
None
|
SRR3675585
|
Sensitive
|
lineage4.9
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
SRR7070157
|
Other
|
lineage4.1.1.3.1
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
ERR4817069
|
RR-TB
|
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
ERR2513405
|
Other
|
lineage2.2.1
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
ERR4815471
|
Sensitive
|
lineage4.9
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
ERR4796577
|
HR-TB
|
|
None
|
SRR1140716
|
Other
|
lineage3
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
SRR28351584
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR10315558
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR1049676
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
ERR3283033
|
Sensitive
|
lineage4.9
|
None
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6982239
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1049672
|
Other
|
lineage3
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4596904
|
MDR-TB
|
lineage3.1.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR2229198
|
Sensitive
|
lineage4.8
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR4821811
|
Sensitive
|
lineage4.9
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR4819933
|
Sensitive
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
ERR6866639
|
Other
|
lineage4.9
|
None
|
ERR126597
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|