Rv3596c - c.702G>C
Drug resistance types
75 Sensitive
28 RR-TB
39 HR-TB
37 MDR-TB
21 Pre-XDR-TB
0 XDR-TB
65 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 93 |
| lineage4.9;lineage2.2 | 1 |
| lineage4 | 48 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| lineage2.2.1 | 25 |
| lineage3.1.3 | 1 |
| lineage4.4.2 | 1 |
| La1.8.1 | 4 |
| La1.7.1 | 1 |
| lineage3 | 13 |
| lineage4.8 | 6 |
| 16 | |
| lineage4.5 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.1.2.1 | 3 |
| lineage4.1 | 2 |
| lineage4.3 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4.3.3 | 3 |
| lineage1.1.1 | 2 |
| lineage3.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage2.1 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 2 |
| La1.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 265 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21469201 | Other | La1.7.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815550 | Other | lineage4 | None | ERR4815556 | RR-TB | lineage3 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | ERR4817069 | RR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5341366 | Sensitive | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341387 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819575 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046397 | Other | None | ERR485006 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR7496471 | Sensitive | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR036207 | Other | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR1063855 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4596902 | HR-TB | lineage3 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769436 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769517 | Other | La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6358979 | Other | None | ERR6359070 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866022 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866639 | Other | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736872 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | None | SRR1173777 | Other | lineage4 | None |
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