EBG00000313339 - n.1019T>C


Drug resistance types
26 Sensitive 40 RR-TB 17 HR-TB 36 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 103 Other
lineage Counts
lineage Count
lineage4.9 46
lineage2.2.1 44
lineage4.7 1
La1.8.1 4
lineage4.6.1.1 1
lineage4.3.4.2.1 7
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage3 13
lineage2.2.2 3
lineage3.1.1 4
lineage4.2.2.2 2
lineage1.1.1.1 1
lineage4.1.2.1;lineage4.9 1
lineage4.1.2;lineage4.9 1
lineage2;lineage4 1
lineage4.2.1.1 2
lineage4.3.2.1 1
lineage4.8 43
lineage4.6.1.2 5
lineage4.4.2 4
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.1.2.1 10
lineage4 2
lineage1.1.1 1
lineage4.3.4.2 3
lineage4.2.1 4
lineage5.1.1 1
lineage4.1.2 1
lineage1.1.3.3 1
lineage4.3.4.2;lineage4.9 1
lineage3;lineage4 1
lineage4.1.1.3 3
lineage4.3.4.1 2
lineage4.1;lineage4.9 1
lineage4.1.3 2
lineage2.2.1.1 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.4.1.1 2
lineage4.6.2.2 1
lineage4.3;lineage4.9 1
lineage4.3.3 2
lineage4.3.2 1
lineage1.2.2.2 1
lineage3.1.3 1
lineage4.1.2.1;lineage4.4.1 1
1
La1.6 1
lineage3.1.2.2 1
lineage4.4 1
La2 1
spoligotype Counts
spoligotype Count
None 238
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4820030 Other lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR6046359 Other lineage4.7 None
ERR3439489 RR-TB La1.8.1 None
ERR4596910 Sensitive lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4819546 HR-TB lineage3 None
ERR1023509 Other lineage4.9 None
DRR185024 Other lineage2.2.2 None
ERR9285979 RR-TB lineage3.1.1 None
SRR16058249 Sensitive lineage4.2.2.2 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR1173185 Other lineage4.9 None
SRR6982246 Sensitive lineage4.1.2;lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR6785281 Other lineage4.2.1.1 None
SRR5709926 MDR-TB lineage2.2.1 None
SRR9971168 Other lineage4.3.2.1 None
ERR4815815 Sensitive lineage4.9 None
SRR1062918 Other lineage3 None
SAMEA3501046 RR-TB lineage4.8 None
SAMEA3501067 RR-TB lineage4.8 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1173770 Other lineage4.9 None
ERR978757 RR-TB lineage4.8 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR11342646 HR-TB lineage3 None
SRR13423546 Other lineage4.4.2 None
ERR978734 RR-TB lineage4.8 None
ERR4811101 Other lineage4.4.2 None
ERR978694 Other lineage4.8 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR10796592 Other lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
ERR4798823 HR-TB lineage4 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR978751 Other lineage4.8 None
ERR4818904 Other lineage4.8 None
ERR4819314 Other lineage1.1.1 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1173170 Other lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR5007204 Other lineage4.1.2.1 None
SRR6045359 Sensitive lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR11465829 Sensitive lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR14296220 Other La1.8.1 None
SRR1181403 Other lineage4.9 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
SRR10315558 Sensitive lineage2.2.1 None
ERR10219876 Other lineage4.3.4.2 None
SRR18002941 RR-TB lineage2.2.1 None
ERR4812495 Other lineage4.1.2.1 pe
ERR502474 RR-TB lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR3675265 Other lineage4 None
ERR751345 Other lineage5.1.1 None
ERR978756 Other lineage4.8 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
SAMEA3501015 Other lineage4.8 None
ERR978752 Other lineage4.8 None
ERR10796581 Other lineage4.1.2 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
ERR067712 Sensitive lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR7070521 Other lineage4.2.1.1 None
ERR4596904 MDR-TB lineage3.1.1 None
SRR7131230 HR-TB lineage4.3.4.2 None
ERR978748 Other lineage4.8 None
SRR1173515 Sensitive lineage4.9 None
ERR4821811 Sensitive lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR502473 RR-TB lineage4.9 None
SRR18002945 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR3675509 Other lineage4.9 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
ERR3283021 HR-TB lineage4.9 None
SRR6046376 Other lineage3 None
SRR1196545 Sensitive lineage4.9 None
ERR11465192 Sensitive lineage4.3.4.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
ERR10796631 Other lineage4.3.4.2;lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR1173740 Other lineage3;lineage4 None
SRR1184329 Other lineage4.9 None
SRR18002980 Other lineage2.2.1 None
ERR978726_ERR978727 RR-TB lineage4.8 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR11465579 Sensitive lineage4.3.4.1 None
SAMEA3501070 RR-TB lineage4.8 None
SRR18002987 Other lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR7070134 Other lineage3.1.1 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR7755649 MDR-TB lineage4.2.1 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR10796599 Other lineage4.8 None
SRR11462861 Other La1.8.1 None
SRR18002981 Other lineage2.2.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR978727 Other lineage4.8 None
ERR4817915 Other lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4596944 MDR-TB lineage3.1.1 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1140716 Other lineage3 None
ERR10796560 Other lineage4.9 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR2517074 Pre-XDR-TB lineage3 gb
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7645906 Other lineage2.2.1 None
SRR7131075 Other lineage4.8 None
ERR978755 RR-TB lineage4.8 None
ERR4830856 MDR-TB lineage4.4.1.1 None
ERR11465777 Sensitive lineage4.1.1.3 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR978694_ERR978693 Other lineage4.8 None
SRR6046839 Other lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR22424765 HR-TB lineage4.8 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR11342669 Other lineage4.8 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR7131229 Other lineage4.1.2.1 None
ERR6866241 Other lineage4.3.2 None
SRR7131123 Other lineage4.8 None
ERR4821172 RR-TB lineage4.9 None
DRR184982 Other lineage2.2.1 None
ERR867555 Other lineage3 None
SRR18002963 Other lineage2.2.1 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SAMEA3501065 RR-TB lineage4.8 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR18002937 Other lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
DRR184932 Other lineage2.2.1 None
SRR3675389 Other lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR4830887 Pre-XDR-TB lineage2.2.1 None
SRR3675582 Other lineage4.9 None
ERR4816198 Sensitive lineage4.1.3 None
SRR6046484 Other lineage1.2.2.2 None
SRR11342688 Other lineage4.2.2.2 None
SRR1049581 MDR-TB lineage4.6.1.2 None
DRR184629 Other lineage2.2.1 None
ERR4596902 MDR-TB lineage3 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR18003049 Other lineage2.2.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR978747 Other lineage4.8 None
SRR2024953 MDR-TB lineage2.2.1 cn
ERR9119120 Other lineage4.8 None
SRR7236330 Other La1.8.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR4820484 Sensitive lineage4.8 None
ERR10762248 MDR-TB lineage4.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978735 Other lineage4.8 None
SRR7069074 Other lineage3 None
SRR1173450 Other lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
ERR11465490 Sensitive lineage4.1.2.1 None
ERR4819863 RR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR19303899 Other lineage3 None
ERR10762297 MDR-TB lineage4.2.1 None
SRR1173281 Other lineage3 None
SRR1181256 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR19303907 Other lineage4.8 None
ERR867570 RR-TB lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR11465830 Sensitive lineage4.9 None
ERR4796577 HR-TB None
SAMEA3501063 RR-TB lineage4.8 None
ERR4816762 Sensitive lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR10993951 RR-TB La1.6 None
ERR978761 Other lineage4.8 None
SRR15315797 RR-TB lineage2.2.1 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR1180440 Other lineage4.9 None
SRR18003042 Other lineage2.2.1 None
SRR6046440 Other lineage3.1.2.2 None
ERR502481 RR-TB lineage4.9 None
SRR21727760 Other lineage2.2.1 None
SRR18002974 Other lineage2.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR7645899 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR5908124 Other lineage4.8 None
SRR1049672 Other lineage3 None
ERR108125 RR-TB lineage4.9 None
ERR978762 Other lineage4.8 None
ERR4818561 Sensitive lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR6046020 Other lineage3 None
ERR502479 RR-TB lineage4.9 None
SRR19304104 Other lineage4.8 None
SRR13888750 Other La2 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR911930 Other lineage4.8 None
ERR502478 RR-TB lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR18003047 MDR-TB lineage2.2.1 None