EBG00000313339 - n.2972C>A


Drug resistance types
109 Sensitive 34 RR-TB 43 HR-TB 56 MDR-TB 23 Pre-XDR-TB 0 XDR-TB 114 Other
lineage Counts
lineage Count
lineage4.3.3;lineage4.9 1
lineage4.9 115
lineage4.4.1.1 9
lineage4.3.3 15
lineage1.1.1.1 2
lineage4.4.1.2 1
lineage2.2.1 44
lineage2;lineage4 1
lineage4.3.4.1 6
lineage4.3.4.2.1 14
lineage2.2.2 4
lineage3 17
lineage4.1.2.1;lineage4.4.1 1
lineage4.1.3 2
La1.8.1 5
lineage4.1.2 2
lineage4.4.1.1.1 4
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.1.2.1 11
lineage4.1.1.3 8
lineage1.2.2.2 3
lineage4.1.1.1 5
lineage2.2.1;lineage4.9 3
lineage4.3.2.1 7
lineage4.6.1.2 5
lineage2.1;lineage4.9 2
lineage4.6.2.2 1
lineage4.1.2.1;lineage4.9 1
La1.4 1
lineage5.1.1 3
La1.3 5
lineage4.3.4.2 3
lineage4.6.4 1
3
lineage1.1.3.2 3
La1.2 1
lineage4.9;lineage7 2
La1;lineage4.9 1
lineage3.1.3 1
lineage4.7 1
lineage4.1.1.3;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage7 1
lineage3.1.1 2
lineage4.3.3;lineage4.8 4
lineage3.1.2.1 3
lineage4.9;lineage5.1.1 1
lineage4.1.1.3.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2.1.1;lineage4.3.3 1
lineage1.2.1.1 1
lineage4.8.1 5
lineage4.3.2 2
lineage2.2.1;lineage4 2
lineage4.8 10
lineage2;lineage4.9 1
lineage4.2.2.2 2
lineage4.3.3;lineage4.3.4.2 1
La1.6 3
lineage3.1.2.1;lineage4.9 1
lineage4.6.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4 3
lineage4.4.2 1
lineage4.2.1 3
lineage1.2.2 2
lineage3;lineage4 1
lineage4.5 1
M.canetti;lineage2.1 1
lineage4.6.5 1
lineage2.2.1.1 1
La2 1
lineage1.2.1.2 1
lineage3.1.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 379
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4821679 Other lineage4.3.3 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR6153231 Sensitive lineage4.4.1.2 None
SRR9971112 Other lineage2.2.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181351 Sensitive lineage4.9 None
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR12708419 Other lineage4.3.3 None
SRR21657198 HR-TB lineage4.3.3 None
SRR1181368 Other lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
ERR228175 Sensitive lineage3 None
ERR4819462 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4815471 Sensitive lineage4.9 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4817915 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR4821263 Other lineage4.1.3 gb
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR216953 Sensitive lineage4.3.4.2.1 None
SRR6982178 Sensitive lineage2.2.1 None
SRR7240147 Other La1.8.1 None
SRR7645853 MDR-TB lineage2.2.1 None
SRR1180406 Sensitive lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4819357 Sensitive lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
SRR12708409 HR-TB lineage4.3.3 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1180345 Other lineage4.9 None
ERR387051 Other lineage4.9 None
ERR4816610 Other lineage4.3.3 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1172807 Sensitive lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR736818 Sensitive lineage4.3.3 None
SRR1172717 Sensitive lineage4.9 None
ERR10796628 Other lineage4.3.3 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786498 Sensitive lineage4.1.2.1 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR5152926 MDR-TB lineage2.2.1 None
ERR4815225 Other lineage1.2.2.2 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR2513259 Other lineage3 None
ERR3275709 HR-TB lineage3 nl
SRR12708415 HR-TB lineage2.2.1 None
ERR176741 Other lineage4.9 None
ERR867569 Other lineage4.9 None
SRR6797751 MDR-TB lineage2.2.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR4819579 HR-TB lineage4.3.3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR1465744 Sensitive lineage4.1.2.1 None
ERR6359066 HR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR6981962 Sensitive lineage4.3.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR4821704 Other lineage4.3.3 None
ERR4816852 Other lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR4033549 Other lineage2.2.2 None
SRR1180399 Sensitive lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR4814709 Other lineage4.1.1.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR11342676 HR-TB lineage4.6.2.2 None
DRR099689 Sensitive lineage1.1.1.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR12199468 Sensitive lineage4.9 None
SRR1173185 Other lineage4.9 None
SRR16278274 Other La1.4 None
ERR867571 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR502480 Other lineage5.1.1 None
ERR2851356 Sensitive lineage4.9 None
SRR2100532 Sensitive lineage3 None
ERR4769514 Other La1.3 None
ERR473334 HR-TB lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR1035299 MDR-TB lineage4.1.2.1 br
ERR1679639 Other lineage4.6.4 None
SRR1181402 Sensitive lineage4.9 None
SRR1238557 Other lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR144568 Sensitive None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR20632814 Sensitive lineage4.9 None
ERR216950 Sensitive lineage1.1.3.2 None
SRR1173770 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR1213889 MDR-TB lineage4.3.4.2.1 rw
ERR4769418 Other La1.2 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR1173281 Other lineage3 None
SRR1175491 MDR-TB lineage4.3.4.1 None
ERR9786076 Sensitive lineage3 None
SRR11342671 RR-TB lineage4.1.3 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR6982168 Sensitive lineage4.4.1.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR7496523 Other lineage4.7 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR1173310 Other lineage3.1.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR867570 RR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
SRR1175513 Sensitive lineage4.9 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
SRR6045832 Other lineage4.9 None
ERR4796577 HR-TB None
ERR190388 Sensitive lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1180250 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR6981912 Sensitive lineage4.3.2.1 None
ERR4816762 Sensitive lineage4.9 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR6982471 Sensitive lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR4769444 HR-TB lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR4820798 Other lineage3.1.2.1 gb
ERR2660536 Sensitive lineage2.2.1 None
ERR1082121 Sensitive lineage4.9;lineage5.1.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
SRR12708414 HR-TB lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4816549 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4822261 RR-TB lineage2.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR6982115 Sensitive lineage4.3.2 None
ERR867568 Other lineage2.2.1;lineage4 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR4819948 Other lineage4.4.1.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR1180440 Other lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
ERR473323 HR-TB lineage4.9 None
ERR502474 RR-TB lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR11342669 Other lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
ERR10796564 Other lineage4.3.3 None
ERR5162090 RR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SAMEA3501073 RR-TB lineage4.8 None
ERR10796633 Other lineage4.3.4.2 None
SRR7069835 Other lineage2.2.1 None
ERR4821119 Other lineage4.4.1.1 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR6982342 Sensitive lineage4.3.2.1 None
ERR867526 MDR-TB lineage2.2.1 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR867538 Other lineage4.2.2.2 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR867575 Other lineage4.9 None
ERR4769408 Other La1.3 None
ERR1035295 MDR-TB lineage4.1.2.1 br
SRR6982070 Sensitive lineage2.2.1;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR12708418 HR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR11342682 Other lineage4.1.2 None
ERR867574 Other lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR1035297 MDR-TB lineage4.3.4.1 br
SRR7236233 Other La1.8.1 None
ERR4816964 Sensitive lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
ERR4769433 RR-TB lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR10315751 MDR-TB lineage4.8 None
ERR4821796 Other lineage4.1.1.1 None
SRR1175508 Sensitive lineage4.9 None
ERR1034911 MDR-TB lineage4.3.3;lineage4.3.4.2 pt
SRR10993944 Other La1.6 None
ERR323068 Sensitive lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR502478 RR-TB lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR6982410 Sensitive lineage4.8.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR133816 MDR-TB lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR1213875 Sensitive lineage4.3.3 de
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR323061 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR6982257 Sensitive lineage4.1.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4814976 Other lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR7240350 Other La1.8.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR137226 MDR-TB lineage2.2.1 None
ERR867566 Other lineage4.9 None
SRR7236330 Other La1.8.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR7496471 Sensitive lineage4 None
SRR1184308 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR867572 Other lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR20969542 Other lineage4.4.2 None
ERR4814639 HR-TB lineage4.9 None
SRR10993957 Other La1.6 None
ERR867541 MDR-TB lineage4.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4596902 MDR-TB lineage3 None
SRR1180977 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR978767 RR-TB lineage4.8 None
ERR4818988 Other lineage1.2.2 None
ERR6358951 Sensitive lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR4818831 Other lineage3 None
SRR1180446 Other lineage4.9 None
SRR5152904 Other lineage2.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR502470 RR-TB lineage4.9 None
ERR2179695 Sensitive lineage4.5 None
SRR11972188 MDR-TB lineage2.2.1 None
ERR502517 Other lineage5.1.1 None
SRR1180413 Sensitive lineage4.9 None
ERR867573 Other lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR4815815 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4816464 Other lineage3 None
ERR4769555 Sensitive La1.3 None
ERR161201 Sensitive lineage1.1.3.2 None
ERR4817060 Other None
SRR11342646 HR-TB lineage3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11462861 Other La1.8.1 None
SRR1175474 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR3275190 Other lineage3 nl
ERR4798823 HR-TB lineage4 None
ERR4816322 Other lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1140716 Other lineage3 None
SRR1173170 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR1175506 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4816928 HR-TB lineage1.2.2.2 None
SRR10993951 RR-TB La1.6 None
ERR1082134 Sensitive lineage5.1.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR502481 RR-TB lineage4.9 None
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
SRR1180391 Sensitive lineage4.9 None
SRR2101529 Sensitive lineage4.3.2.1 None
ERR4814745 Other lineage4.6.5 None
SRR7069800 Other lineage3.1.2.1 None
SRR3675552 Other lineage4.9 None
ERR1063890 Sensitive lineage3.1.1 None
ERR4817667 HR-TB lineage4.8 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR6046117 Other lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1184021 Sensitive lineage4.9 None
SRR6045267 RR-TB lineage4.8 None
ERR067712 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR2446509 Other lineage3 nl
SRR9971150 RR-TB lineage4.8.1 None
ERR4769508 RR-TB lineage4.9 None
ERR176780 Sensitive lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR6982465 Sensitive lineage4.3.4.2 None
SRR6982472 Sensitive lineage4.4.1.1 None
ERR4818126 Other lineage1.2.2 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR867554 Other lineage4.3.4.1 None
ERR216910 Sensitive lineage4.3.4.2.1 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
SRR10315567 HR-TB lineage2.2.1 None
ERR4819096 Other lineage4.4.1.1 None
ERR502473 RR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR12708392 Other lineage2.2.1 None
ERR176781 Sensitive lineage1.1.3.2 None
ERR1213930 Other lineage4.3.2 pe
SRR20969475 Other lineage1.2.1.2 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR4816417 Other lineage4.9 None
ERR2660499 Sensitive lineage4.1.1.3 None
ERR4769552 Sensitive La1.3 None
ERR4819622 Other lineage4.1.2.1 None
ERR4769493 Other lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR4819546 HR-TB lineage3 None
ERR1023509 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None