Rv2043c - p.Asp12Gly
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
1 RR-TB
1 HR-TB
54 MDR-TB
42 Pre-XDR-TB
5 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 80 |
| lineage4.8 | 9 |
| lineage4.2.2 | 3 |
| lineage4.2.1 | 2 |
| lineage4.3.2 | 2 |
| lineage4.1.2.1 | 6 |
| lineage4.7 | 1 |
| lineage4.1.1.1 | 2 |
| lineage1.1.2 | 3 |
| lineage3 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 110 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12420263 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093571 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292280 | MDR-TB | lineage2.2.1 | None | SRR12420534 | MDR-TB | lineage2.2.1 | None | SRR12420529 | MDR-TB | lineage2.2.1 | None | ERR4024538 | Other | lineage4.8 | None | ERR13284077 | MDR-TB | lineage2.2.1 | None | SRR29093330 | Pre-XDR-TB | lineage2.2.1 | None | SRR7645860 | Pre-XDR-TB | lineage2.2.1 | None | ERR3794360 | MDR-TB | lineage2.2.1 | None | SRR671787 | Pre-XDR-TB | lineage2.2.1 | cn | ERR8665787 | Pre-XDR-TB | lineage2.2.1 | None | SRR27757528 | XDR-TB | lineage2.2.1 | None | SRR18911238 | MDR-TB | lineage2.2.1 | None | SRR28393574 | MDR-TB | lineage2.2.1 | None | SRR28393342 | MDR-TB | lineage4.8 | None | ERR4811333 | MDR-TB | lineage4.2.2 | cn | ERR4829728 | MDR-TB | lineage4.2.1 | it | ERR11798616 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516704 | Pre-XDR-TB | lineage4.3.2 | pe | ERR2516409 | Pre-XDR-TB | lineage4.3.2 | pe | ERR2516482 | MDR-TB | lineage2.2.1 | pe | SRR25207350 | MDR-TB | lineage4.2.2 | None | SRR27757527 | XDR-TB | lineage2.2.1 | None | ERR1034754 | MDR-TB | lineage2.2.1 | pe | ERR13285089 | MDR-TB | lineage4.1.2.1 | None | SRR13232534 | Pre-XDR-TB | lineage2.2.1 | None | SRR19276624 | MDR-TB | lineage4.7 | None | ERR9992869 | XDR-TB | lineage4.1.1.1 | None | SRR1723464 | HR-TB | lineage2.2.1 | None | ERR6865997 | Other | lineage4.8 | None | SRR26937031 | MDR-TB | lineage2.2.1 | None | SRR12420541 | MDR-TB | lineage2.2.1 | None | ERR9992700 | Pre-XDR-TB | lineage2.2.1 | None | ERR11068871 | MDR-TB | lineage2.2.1 | None | SRR26937098 | MDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285095 | MDR-TB | lineage4.1.2.1 | None | SRR29772778 | MDR-TB | lineage1.1.2 | None | SRR1049688 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972262 | MDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420637 | MDR-TB | lineage2.2.1 | None | SRR24255918 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316368 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822412 | MDR-TB | lineage2.2.1 | ua | ERR4796950 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800595 | Pre-XDR-TB | lineage2.2.1 | in | SRR28393573 | MDR-TB | lineage2.2.1 | None | SRR28394264 | RR-TB | lineage4.8 | None | SRR28351437 | Pre-XDR-TB | lineage3 | None | ERR7911163 | MDR-TB | lineage2.2.1 | vn | SRR26937091 | MDR-TB | lineage2.2.1;lineage4.9 | None | SRR6824376 | MDR-TB | lineage2.2.1 | cn | ERR11081055 | MDR-TB | lineage4.1.2.1 | None | ERR11773826 | Pre-XDR-TB | lineage2.2.1 | None | SRR5073521 | MDR-TB | lineage2.2.1 | vn | ERR9993255 | XDR-TB | lineage4.1.1.1 | None | SRR1049687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062917 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420469 | MDR-TB | lineage2.2.1 | None | DRR474000 | MDR-TB | lineage2.2.1 | None | SRR16370258 | MDR-TB | lineage2.2.1 | None | SRR15316366 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715283 | Pre-XDR-TB | lineage2.2.1 | None | ERR4178249 | Other | lineage4.8 | None | ERR1665404 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380020 | Pre-XDR-TB | lineage2.2.1 | None | ERR13273358 | MDR-TB | lineage2.2.1 | None | SRR15369001 | MDR-TB | lineage2.2.1 | None | ERR6866523 | Other | lineage4.8 | None | ERR13284615 | MDR-TB | lineage2.2.1 | None | SRR28860207 | MDR-TB | lineage2.2.1 | None | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043896 | MDR-TB | lineage2.2.1 | None | ERR6866034 | Other | lineage4.8 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6479539 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284137 | MDR-TB | lineage2.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539334 | Pre-XDR-TB | lineage2.2.1 | None | SRR16115021 | MDR-TB | lineage2.2.1 | None | SRR29681428 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887662 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266440 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316305 | MDR-TB | lineage2.2.1 | None | SAMN02381027 | Pre-XDR-TB | lineage2.2.1 | ug | ERR3794432 | MDR-TB | lineage2.2.1 | None | SRR26936973 | Pre-XDR-TB | lineage2.2.1 | None | ERR11069092 | MDR-TB | lineage4.1.2.1 | None | SRR28888084 | XDR-TB | lineage2.2.1 | None | SRR1140694 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798529 | MDR-TB | lineage2.2.1 | None | ERR229998 | MDR-TB | lineage2.2.1 | ru | SRR6824480 | MDR-TB | lineage4.2.2 | cn | ERR6865400 | Other | lineage4.8 | None | SRR28888085 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639791 | MDR-TB | lineage2.2.1 | None | SRR24255917 | Pre-XDR-TB | lineage2.2.1 | None | SRR23311029 | MDR-TB | lineage4.2.1 | None | SRR15014783 | MDR-TB | lineage1.1.2 | None | SRR29096631 | Pre-XDR-TB | lineage2.2.1 | None | ERR11050149 | MDR-TB | lineage4.1.2.1 | None | ERR13284937 | MDR-TB | lineage4.1.2.1 | None | ERR8665788 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772520 | MDR-TB | lineage1.1.2 | None | ERR4024799 | Other | lineage4.8 | None | ERR10679994 | MDR-TB | lineage2.2.1 | None | SRR29681426 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420422 | MDR-TB | lineage2.2.1 | None |
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