Rv0668 - c.1524T>C
Drug resistance types
43 Sensitive
38 RR-TB
115 HR-TB
61 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
105 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage2.2.1 | 22 |
| La1.7;M.canetti;lineage4.9 | 5 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage4.9 | 100 |
| lineage4.2;lineage4.9 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 6 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.1.2.1 | 14 |
| M.canetti;lineage2.1;lineage4.9 | 24 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2 | 2 |
| lineage4.8 | 5 |
| lineage1.2.2.2 | 1 |
| lineage3 | 8 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.7;lineage4.9 | 8 |
| lineage4.9;lineage7 | 4 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage4.1.1.3 | 2 |
| La1.2;La1.8.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4 | 3 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.2 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.3 | 4 |
| lineage1.1.1 | 2 |
| lineage5.2 | 2 |
| 5 | |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.4.1.1 | 3 |
| La1.8.1 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| lineage4.2.1 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| La3;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2.1;lineage4.9 | 6 |
| lineage2.1;lineage4.3.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 7 |
| lineage2.2;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.2.1 | 3 |
| La1.7;lineage4.3.4.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage6.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.1 | 1 |
| La1.2.BCG | 2 |
| La3;M.canetti;lineage3.1 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4.7 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage4.6.1.1 | 2 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| La2;lineage2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 1 |
| lineage4.4 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage1.1.2;lineage4 | 1 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 369 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | ERR323038 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR3675243 | Other | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR3283048 | Other | lineage4.9 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358837 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4819241 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR176651 | Other | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675507 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR7535074 | Sensitive | lineage3 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR9896144 | Other | lineage3 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1166821 | Other | lineage4.1.2.1 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR4830353 | Other | La1.7 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR181887 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR11465801 | Other | lineage4.3.4.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR3675561 | Other | M.canetti;lineage2.1;lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR13423544 | Other | lineage4.5 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR4188350 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR3675450 | HR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR13861305 | Other | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR1873393 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR9119096 | RR-TB | lineage4.3.3 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR4817069 | RR-TB | None | SRR6325442 | HR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR126600 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR6044815 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR323047 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR6045555 | Other | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR3675545 | Other | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR323060 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7535053 | Sensitive | lineage3 | None | SRR29051043 | Other | lineage4.3.3 | None | ERR038268 | HR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR3675322 | HR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3468607 | Other | lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR29772570 | Other | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675506 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR3797083 | RR-TB | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | ERR2693228 | RR-TB | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR3675269 | RR-TB | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR26399491 | Sensitive | lineage1.1.1.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | ERR3283016 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR3675280 | RR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | SRR3675515 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR3275215 | RR-TB | lineage4.1.2.1 | nl | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675494 | RR-TB | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR5908228 | RR-TB | lineage4.3.3 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | SRR3675312 | Sensitive | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2514692 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR124652 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675487 | Other | M.canetti;lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR7240492 | HR-TB | La1.7.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR13861168 | RR-TB | lineage4.9 | None | ERR2446118 | Other | lineage4.1.2.1 | nl | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR1640750 | Other | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR3675444 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | ERR176658 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR323063 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR323058 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821053 | RR-TB | lineage3 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR3675284 | Sensitive | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR126608 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR323040 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4817692 | HR-TB | lineage1.1.2;lineage4 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR25827605 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | ERR4816478 | HR-TB | lineage4 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR13861296 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR6831950 | Sensitive | lineage4.3.3 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None |
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