EBG00000313325 - n.1035G>A
Drug resistance types
38 Sensitive
45 RR-TB
30 HR-TB
31 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
119 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 71 |
| lineage2;lineage4 | 1 |
| lineage4.8 | 42 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.3 | 11 |
| lineage4.1;lineage4.9 | 1 |
| lineage3 | 16 |
| lineage4.7 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage2.2.1 | 30 |
| lineage1.1.3.3 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.1.2.1 | 11 |
| lineage4.4.1.1.1 | 4 |
| lineage6.1.3 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.4.1.1 | 4 |
| La1.8.1 | 4 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.2.1 | 4 |
| lineage4.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.4.2.1 | 2 |
| La1.3 | 6 |
| lineage2.2.1.1 | 3 |
| lineage4 | 3 |
| La1.2;La1.8.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage2.2.2 | 4 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4.2 | 3 |
| lineage4.1.1.3 | 7 |
| 2 | |
| La1.6 | 1 |
| lineage4.3.4.2 | 3 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.5 | 2 |
| La1.4 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.8.1 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.6.2.2 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 282 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR473323 | HR-TB | lineage4.9 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | SRR7496523 | Other | lineage4.7 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR7069922 | Other | lineage2.2.1 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4819357 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR9786076 | Other | lineage3 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR978747 | Other | lineage4.8 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045832 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4816322 | Other | lineage4.9 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR1063855 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4769514 | Other | La1.3 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR10796592 | Other | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR1173740 | Other | lineage3;lineage4 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978751 | Other | lineage4.8 | None | SRR6046376 | Other | lineage3 | None | SRR5153833 | Other | lineage2.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR736831 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR978752 | Other | lineage4.8 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4820484 | Sensitive | lineage4.8 | None | SRR13423546 | Other | lineage4.4.2 | None | ERR911929 | Other | lineage4.8 | None | ERR4814905 | Sensitive | lineage4.8 | gb | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR1238558 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR978761 | Other | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | ERR867569 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4796577 | HR-TB | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4816852 | Other | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR10796635 | Other | lineage4.8 | None | ERR978694 | Other | lineage4.8 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4769493 | Other | lineage4.9 | None | ERR978756 | Other | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4769408 | Other | La1.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR7443725 | Sensitive | lineage4.9 | None | SRR7069391 | Other | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR2446509 | Other | lineage3 | nl | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR1175487 | Sensitive | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR18913779 | Other | lineage3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR10796565 | Other | lineage4.9 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR7443751 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | DRR184982 | Other | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR7443747 | Sensitive | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR16278274 | Other | La1.4 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR6046839 | Other | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR7617847 | Other | La1.8.1 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR3077969 | Other | La1.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR638895 | Sensitive | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR978735 | Other | lineage4.8 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR21690287 | Sensitive | lineage2.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR867572 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR867555 | Other | lineage3 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818464 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4814976 | Other | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4769436 | Other | La1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR323037 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | ERR10796560 | Other | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR7236399 | Other | La1.8.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR10796589 | Other | lineage4.9 | None | SRR21713567 | Other | lineage4.5 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR10796553 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR7851312 | Other | La1.2 | None |
|---|
