EBG00000313339 - n.1053_1056delTGGT


Drug resistance types
38 Sensitive 36 RR-TB 26 HR-TB 46 MDR-TB 21 Pre-XDR-TB 1 XDR-TB 78 Other
lineage Counts
lineage Count
lineage2.2.1 39
lineage4.8 14
lineage4.1.1.3 4
lineage4.6.2.2 3
lineage4.1.2.1 15
lineage2.2.2 4
lineage4.3.3 4
lineage4.1.4;lineage2.2.1 1
lineage6 1
lineage1.2.1.2 2
lineage4.6.1.2 5
lineage4.3.4.2.1 5
lineage3 12
lineage4.4.1.1;lineage4.1.2.1 1
lineage4 15
La1.6 1
lineage4.3.2.1 2
La1.8.1 10
9
lineage4.9 47
lineage4.2.1 3
lineage4.2.2.2 1
lineage4.2.2.1 1
La1.7.1 3
lineage4.4.2 3
lineage3.1.3 1
lineage1.2.1.2.1 2
lineage4.5 1
lineage4.1.2;lineage3.1 2
lineage6.1.1 1
lineage4.4.1.1 3
lineage4.4.1 1
lineage2.2.1.1 2
lineage2.2 2
lineage4;lineage2 1
lineage1.1.1 2
lineage4.3.4.2 2
lineage4.8.2 2
lineage4.1.2 2
lineage4.6 2
lineage4;lineage3 1
lineage1.2.2.2 1
lineage4.1 1
lineage4.3.4.1 1
lineage4.7 1
lineage4.4.1.2 1
lineage6.2.3;lineage1.1.2 1
lineage3.1.1 2
La1.3 3
lineage1.1.3.3 1
lineage4.3.2 1
lineage5.1.1 1
spoligotype Counts
spoligotype Count
None 246
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR970413 MDR-TB lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9119120 Other lineage4.8 None
SRR10315551 Sensitive lineage2.2.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9786613 Sensitive lineage4.1.2.1 None
ERR983241 MDR-TB lineage2.2.1 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786828 MDR-TB lineage4.1.4;lineage2.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787033 Sensitive lineage6 None
SRR10214505 Sensitive lineage1.2.1.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049672 Other lineage3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062928 RR-TB lineage4 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR10993951 RR-TB La1.6 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR11462861 Other La1.8.1 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173170 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173515 HR-TB lineage4.9 None
SRR1173740 Other None
SRR1175052 HR-TB lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR11972327 Pre-XDR-TB lineage2.2.1 None
SRR14296220 Other La1.8.1 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR16156188 HR-TB lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
SRR16058249 Sensitive lineage4.2.2.2 None
SRR16149133 MDR-TB lineage4.2.2.1 None
SRR16156804 RR-TB lineage4.9 None
SRR16156751 RR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR1792011 Other La1.8.1 None
SRR1792022 Other La1.8.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18002995 Other lineage4.4.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003045 Other lineage2.2.1 None
SRR18913779 Other lineage3 None
SRR18913742 Sensitive lineage3.1.3 None
SRR18911462 Sensitive lineage1.2.1.2.1 None
SRR19303917 Other lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR21713567 Sensitive lineage4.5 None
SRR2101625 Other lineage4.1.2;lineage3.1 None
SRR21240161 Sensitive lineage4.1.2.1 None
SRR21469201 Other La1.7.1 None
SRR21658552 Other lineage6.1.1 None
SRR19304104 Other lineage4.8 None
SRR20632814 Sensitive lineage4 None
SRR21469200 Other La1.7.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR21727728 Sensitive lineage4.4.1.1 None
SRR22424765 MDR-TB lineage4 None
SRR21727888 Other lineage1.2.1.2 None
SRR21727760 Other lineage2.2.1 None
ERR1750938 Other lineage4.4.1 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR3619764 Pre-XDR-TB lineage2.2 None
ERR4814639 HR-TB lineage4 None
ERR4814690 Sensitive lineage2.2.1 None
ERR1665405 Pre-XDR-TB lineage2.2.1 None
ERR1750896 Sensitive lineage2.2.1 zw
SRR22424787 Sensitive lineage4.9 None
ERR4815310 Other None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR3675282 Other None
ERR4813263 MDR-TB lineage4.8 None
ERR4815550 Other lineage4 None
ERR4816470 Other lineage3 None
ERR4816968 Other lineage4.2.1 gb
ERR2124085 Other lineage4.8 None
ERR4817204 RR-TB lineage4.9 None
ERR2229198 MDR-TB lineage4.8 None
ERR3275709 HR-TB lineage3 nl
ERR4816702 RR-TB lineage4.6.2.2 None
ERR2229791 RR-TB lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4816762 Other lineage4;lineage2 None
ERR4816782 Other lineage4.1.2.1 None
ERR4817554 Other lineage1.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4817915 RR-TB lineage4.9 None
ERR2513405 Other lineage2.2.1 None
ERR2432997 Other lineage4.8 None
ERR2513259 Other lineage3 None
ERR4818561 HR-TB lineage4 None
SRR5007172 Sensitive lineage4.1.2.1 None
ERR4815815 Sensitive lineage4 None
ERR4817667 HR-TB lineage4.8 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4819863 RR-TB lineage4.9 None
SRR5007204 Other lineage4.1.2.1 None
ERR4817628 Sensitive lineage4.8 gb
ERR4819314 Other lineage1.1.1 None
ERR4819546 HR-TB lineage3 None
ERR2513762 Sensitive lineage3 gb
ERR4819383 RR-TB lineage4.9 None
ERR2514215 Other lineage2.2.1 gb
ERR1035138 MDR-TB None
ERR4820484 Other lineage4.8 None
ERR1023509 Other None
ERR4819910 Other lineage4.9 None
ERR2517074 Pre-XDR-TB lineage3 gb
ERR4821573 HR-TB lineage1.2.1.2.1 gb
ERR4820030 Other lineage4.9 None
ERR4821143 RR-TB lineage4.9 None
SRR6045553 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821811 RR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045621 Other lineage4.1.1.3 None
SRR6046210 Other lineage4 None
SRR6045999 Sensitive lineage4.8.2 gb
SRR6044838 Other lineage4.9 None
SRR6046159 Other lineage4.8.2 None
SRR6045359 Sensitive lineage4.9 None
ERR4829536 Sensitive lineage2.2.1 it
ERR4829224 Sensitive lineage4.1.2 None
ERR4830856 MDR-TB lineage4.4.1.1 None
ERR2851354 RR-TB lineage4.9 None
ERR4828805 Other lineage4.6 None
ERR4829623 Sensitive lineage4.8 None
ERR4830701 Other lineage4;lineage3 dz
ERR4830868 MDR-TB lineage4.4.1.1 sz
SRR6046839 Other lineage4.9 None
ERR4829772 MDR-TB lineage4.1.2.1 None
ERR4829788 MDR-TB lineage4.3.3 it
ERR4829725 HR-TB lineage4.6.2.2 it
SRR6046484 Other lineage1.2.2.2 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4831863 HR-TB lineage2.2.1.1 None
ERR502478 RR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
SRR6982141 RR-TB lineage4.3.3 None
SRR6789624 MDR-TB lineage4.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6982246 Sensitive lineage4 None
SRR6982389 Other lineage4.1.2;lineage3.1 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR5087846 Other La1.8.1 None
SRR7131145 Other lineage4.1.2.1 None
ERR5087596 Other La1.8.1 None
ERR5311077 RR-TB La1.8.1 None
SRR7131075 Other lineage4.8 None
SRR7131147 Other lineage4.1.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7131248 Sensitive lineage4.1.2 None
SRR7131182 Other lineage4.1.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR7496471 Sensitive None
SRR7585400 MDR-TB lineage3 None
SRR7496523 Other lineage4.7 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR9971168 Other lineage4.3.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR8649119 Other lineage4.6 None
SRR9971122 MDR-TB lineage4.8 None
DRR184903 Sensitive lineage2.2.2 None
ERR323108 HR-TB lineage4 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR067712 HR-TB lineage4 None
ERR10219876 Other lineage4.3.4.2 None
ERR10762297 MDR-TB lineage4.2.1 None
DRR184982 RR-TB lineage2.2.1 None
ERR3283033 Sensitive lineage4.9 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR3468561 HR-TB lineage4.9 None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3439265 Other lineage4.9 None
ERR3283046 MDR-TB lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
ERR3468488 RR-TB La1.8.1 None
ERR3468613 RR-TB La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797081 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4187652 Other lineage4.9 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4188247 HR-TB None
ERR4596902 HR-TB lineage3 None
ERR4596910 Sensitive lineage4 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4769453 Other La1.3 None
ERR4769423 Other La1.3 None
ERR4769516 Other La1.3 None
ERR4769539 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4769553 RR-TB lineage4.9 None
ERR4796351 MDR-TB lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR5908124 Other lineage4.8 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4811101 Other lineage4.4.2 None
ERR6197024 RR-TB lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR736848 HR-TB None
ERR6866241 Other lineage4.3.2 None
ERR751345 Other lineage5.1.1 None