EBG00000313339 - n.1053_1056delTGGT
Drug resistance types
30 Sensitive
23 RR-TB
23 HR-TB
30 MDR-TB
12 Pre-XDR-TB
2 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 54 |
| lineage2.2.2 | 4 |
| lineage4.4.2 | 3 |
| lineage4.1.2.1 | 7 |
| lineage4.6.2.2 | 1 |
| La1.8.1 | 6 |
| lineage4.1.1.3 | 4 |
| La1.7.1 | 2 |
| lineage4.8 | 7 |
| lineage3 | 10 |
| lineage6.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.3.3 | 3 |
| lineage4.6.1.2 | 4 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 26 |
| lineage4.4.1.1 | 2 |
| lineage3.1.1 | 2 |
| lineage4.2.1 | 2 |
| lineage4.5 | 1 |
| La1.2.BCG | 2 |
| lineage4.7 | 1 |
| La1.6 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.1 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| La1.3 | 1 |
| lineage3.1.3 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage1.1.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 178 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR11462861 | Other | La1.8.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816762 | Sensitive | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR6982141 | Other | lineage4.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR21469200 | Other | La1.7.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR5007204 | Other | lineage4.1.2.1 | None | DRR184982 | Other | lineage2.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR3468488 | Other | La1.8.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR21713567 | Other | lineage4.5 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR926155 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR7496523 | Other | lineage4.7 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1181403 | Other | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR1181256 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR867555 | Other | lineage3 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR1173170 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR4769423 | Other | La1.3 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR736848 | Other | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR5311077 | Other | La1.8.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR2432997 | Other | lineage4.8 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1915485 | Other | La1.2.BCG | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023509 | MDR-TB | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1792011 | Other | La1.8.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None |
|---|
