EBG00000313339 - n.1053_1056delTGGT
Drug resistance types
38 Sensitive
36 RR-TB
26 HR-TB
46 MDR-TB
21 Pre-XDR-TB
1 XDR-TB
78 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 39 |
| lineage4.8 | 14 |
| lineage4.1.1.3 | 4 |
| lineage4.6.2.2 | 3 |
| lineage4.1.2.1 | 15 |
| lineage2.2.2 | 4 |
| lineage4.3.3 | 4 |
| lineage4.1.4;lineage2.2.1 | 1 |
| lineage6 | 1 |
| lineage1.2.1.2 | 2 |
| lineage4.6.1.2 | 5 |
| lineage4.3.4.2.1 | 5 |
| lineage3 | 12 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4 | 15 |
| La1.6 | 1 |
| lineage4.3.2.1 | 2 |
| La1.8.1 | 10 |
| 9 | |
| lineage4.9 | 47 |
| lineage4.2.1 | 3 |
| lineage4.2.2.2 | 1 |
| lineage4.2.2.1 | 1 |
| La1.7.1 | 3 |
| lineage4.4.2 | 3 |
| lineage3.1.3 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage6.1.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.4.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage2.2 | 2 |
| lineage4;lineage2 | 1 |
| lineage1.1.1 | 2 |
| lineage4.3.4.2 | 2 |
| lineage4.8.2 | 2 |
| lineage4.1.2 | 2 |
| lineage4.6 | 2 |
| lineage4;lineage3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage3.1.1 | 2 |
| La1.3 | 3 |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 1 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 246 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9119120 | Other | lineage4.8 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR983241 | MDR-TB | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9786828 | MDR-TB | lineage4.1.4;lineage2.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR14296220 | Other | La1.8.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18911462 | Sensitive | lineage1.2.1.2.1 | None | SRR19303917 | Other | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21658552 | Other | lineage6.1.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21469200 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21727728 | Sensitive | lineage4.4.1.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR21727888 | Other | lineage1.2.1.2 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR1750938 | Other | lineage4.4.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750896 | Sensitive | lineage2.2.1 | zw | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675282 | Other | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815550 | Other | lineage4 | None | ERR4816470 | Other | lineage3 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR2124085 | Other | lineage4.8 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2229791 | RR-TB | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR2432997 | Other | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007172 | Sensitive | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2513762 | Sensitive | lineage3 | gb | ERR4819383 | RR-TB | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR1035138 | MDR-TB | None | ERR4820484 | Other | lineage4.8 | None | ERR1023509 | Other | None | ERR4819910 | Other | lineage4.9 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR4821573 | HR-TB | lineage1.2.1.2.1 | gb | ERR4820030 | Other | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6046210 | Other | lineage4 | None | SRR6045999 | Sensitive | lineage4.8.2 | gb | SRR6044838 | Other | lineage4.9 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4829536 | Sensitive | lineage2.2.1 | it | ERR4829224 | Sensitive | lineage4.1.2 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR4828805 | Other | lineage4.6 | None | ERR4829623 | Sensitive | lineage4.8 | None | ERR4830701 | Other | lineage4;lineage3 | dz | ERR4830868 | MDR-TB | lineage4.4.1.1 | sz | SRR6046839 | Other | lineage4.9 | None | ERR4829772 | MDR-TB | lineage4.1.2.1 | None | ERR4829788 | MDR-TB | lineage4.3.3 | it | ERR4829725 | HR-TB | lineage4.6.2.2 | it | SRR6046484 | Other | lineage1.2.2.2 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR5087846 | Other | La1.8.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131248 | Sensitive | lineage4.1.2 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7585400 | MDR-TB | lineage3 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR8649119 | Other | lineage4.6 | None | SRR9971122 | MDR-TB | lineage4.8 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3439265 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4188247 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769453 | Other | La1.3 | None | ERR4769423 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR5908124 | Other | lineage4.8 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR736848 | HR-TB | None | ERR6866241 | Other | lineage4.3.2 | None | ERR751345 | Other | lineage5.1.1 | None |
|---|
