EBG00000313339 - n.2450delA
Drug resistance types
62 Sensitive
26 RR-TB
29 HR-TB
17 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
81 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 8 |
| lineage4.9 | 94 |
| lineage2.2.1 | 20 |
| lineage4.8 | 23 |
| lineage4.2.2.2 | 2 |
| lineage3.1.3 | 1 |
| lineage4.3.3 | 4 |
| lineage4.2.1 | 3 |
| lineage4.1.2.1 | 4 |
| lineage4 | 4 |
| lineage2.2.1;lineage4 | 2 |
| La2 | 1 |
| lineage3 | 12 |
| lineage1.2.2.2 | 1 |
| La1;lineage4.9 | 1 |
| La1.3 | 6 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| La1.8.1 | 5 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage1.1.1 | 3 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.7 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.2 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| 1 | |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| La1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 229 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR13888750 | Other | La2 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR736831 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173281 | Other | lineage3 | None | ERR3468488 | Other | La1.8.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21713567 | Other | lineage4.5 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR2100532 | Sensitive | lineage3 | None | SRR7496523 | Other | lineage4.7 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR867566 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR1180345 | Other | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4769408 | Other | La1.3 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR6046839 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR7617847 | Other | La1.8.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR228175 | Sensitive | lineage3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR3275190 | Other | lineage3 | nl | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4814976 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4769555 | Sensitive | La1.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1173770 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR978756 | Other | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | ERR978747 | Other | lineage4.8 | None | SRR11462861 | Other | La1.8.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR6045832 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR176741 | Other | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR1181214 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR6046376 | Other | lineage3 | None | SRR1180250 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR1163055 | MDR-TB | lineage4.8 | None | ERR323037 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR7236399 | Other | La1.8.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None |
|---|
