Rv3596c - c.789T>C
Drug resistance types
5 Sensitive
9 RR-TB
11 HR-TB
1 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9 | 14 |
| lineage4.9;lineage7 | 1 |
| La1.4 | 1 |
| lineage2.2.1 | 10 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.4.1.1 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage3 | 2 |
| lineage4.4 | 1 |
| La1;lineage4.9 | 1 |
| 1 | |
| lineage4.2.2.2 | 1 |
| La1.6;La3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR16278274 | Other | La1.4 | None | SRR6046485 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR11252736 | Other | lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2513259 | Other | lineage3 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4816470 | HR-TB | lineage3 | None | ERR3283032 | Other | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR4817915 | Other | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None |
|---|
