Rv3596c - c.789T>C
Drug resistance types
7 Sensitive
18 RR-TB
14 HR-TB
7 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| 17 | |
| lineage4.9 | 14 |
| lineage4 | 3 |
| lineage4.1.1 | 1 |
| lineage2.2.1 | 18 |
| lineage4.1.3 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage1.2.1.2.1 | 2 |
| La1.2 | 1 |
| La1.3 | 1 |
| lineage4.1.1.3 | 1 |
| La1.4 | 1 |
| lineage4.4 | 1 |
| lineage3.1 | 1 |
| lineage3 | 3 |
| lineage4.8 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693257 | Other | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693232 | Other | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6045480 | Other | lineage4.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | ERR4831117 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR10796571 | Other | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR3283024 | Other | None | ERR10796597 | Other | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3797014 | Other | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3797061 | Other | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR4187671 | Other | lineage4.9;La1.8.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR6336691 | Other | lineage1.2.1.2.1 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796577 | MDR-TB | None | ERR4769495 | Other | La1.3 | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR6336766 | Other | lineage1.2.1.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1173310 | MDR-TB | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR20632814 | Sensitive | lineage4 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675234 | Other | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2229576 | Sensitive | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513259 | Other | lineage3 | None | ERR1023509 | Other | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR3275615 | Sensitive | lineage4.4.1.1 | nl |
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