Rv0668 - c.1179G>C
Drug resistance types
53 Sensitive
46 RR-TB
35 HR-TB
34 MDR-TB
19 Pre-XDR-TB
1 XDR-TB
79 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 19 |
| lineage4.3.3 | 3 |
| lineage4.1.2.1 | 15 |
| lineage4.9 | 62 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1 | 32 |
| lineage4.6.1.2 | 5 |
| lineage4.8 | 11 |
| lineage4.4.1.1 | 6 |
| lineage1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.8.2 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4 | 12 |
| lineage3.1.1 | 3 |
| lineage4.1 | 3 |
| lineage4.3.4.2.1 | 6 |
| 20 | |
| lineage4.9;lineage4.6.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage3.1.2.2 | 1 |
| lineage1.1.3 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1.3 | 1 |
| lineage4.2.1 | 6 |
| lineage4.3.1 | 1 |
| lineage4.7 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.1.4 | 1 |
| lineage5.1.1 | 1 |
| La1.8.1 | 7 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.6.1.1 | 2 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 3 |
| La1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.6.5 | 2 |
| lineage2.2.1.2 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2 | 6 |
| lineage2 | 1 |
| lineage4.4 | 1 |
| La1.4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 267 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816464 | Other | lineage3 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816510 | Other | lineage4.1.2.1 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818691 | Other | lineage4.8 | None | ERR2512986 | Other | lineage3 | None | ERR4817874 | Other | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR3275190 | Other | lineage3 | nl | ERR4818507 | RR-TB | lineage4.1.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819357 | Other | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR1023509 | Other | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | ERR4819933 | Other | lineage4.9 | None | ERR2515032 | Other | lineage3 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR2446509 | Other | lineage3 | nl | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | SRR5535933 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4822104 | RR-TB | lineage3 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4821712 | HR-TB | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045053 | Other | None | SRR6046878 | HR-TB | lineage4 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046362 | HR-TB | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | SRR6046460 | HR-TB | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR4828962 | Sensitive | lineage4.1.4 | it | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6982246 | Sensitive | lineage4 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311084 | Other | La1.8.1 | None | ERR5311087 | Other | La1.8.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645973 | Other | lineage4.3.4.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR8600288 | Other | La1.8.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR998662 | MDR-TB | lineage6.3 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR11465514 | MDR-TB | lineage4.1.1.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283028 | Other | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3468609 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3468644 | HR-TB | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769450 | HR-TB | None | ERR4769516 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4798262 | HR-TB | La1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR8975534 | Sensitive | lineage4.3.4.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1173310 | MDR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR19303776 | Other | lineage4.1.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR19303779 | Sensitive | lineage4.8 | None | SRR19303775 | Other | lineage3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303806 | Sensitive | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | ERR4815901 | Other | lineage2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814748 | Other | lineage4.8 | None | ERR4814841 | Other | lineage4.1 | None | SRR3675270 | HR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR2027290 | RR-TB | lineage3.1 | None |
|---|
