SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1172796
|
Sensitive
|
lineage2.2.1.2
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
ERR11465352
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR3797086
|
Sensitive
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR9992879
|
XDR-TB
|
lineage4.3.3
|
None
|
SRR26399265
|
Other
|
lineage2.2.1
|
None
|
SRR6045887
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
SRR1062918
|
Other
|
lineage3
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
ERR405209
|
Sensitive
|
La1.7;lineage4.9
|
None
|
SRR9971333
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR3675510
|
Sensitive
|
La3;lineage4.9
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
SRR11349147
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR1140716
|
Other
|
lineage3
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR10315556
|
Sensitive
|
lineage2.2.1
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
ERR036207
|
Other
|
lineage4.3;lineage4.9
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175249
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4817204
|
Other
|
lineage4.9
|
None
|
SRR6045053
|
Other
|
lineage4
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR6046046
|
Other
|
lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR4830353
|
Other
|
La1.7
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2514552
|
Sensitive
|
lineage3
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
ERR4820030
|
Other
|
lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
ERR990545
|
Other
|
lineage3
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR6046196
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
SRR1049559
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
ERR2517475
|
Other
|
lineage4
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR5917985
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR17567917
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
SRR3675477
|
Sensitive
|
lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR1140736
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675505
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
SRR14782539
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR400529
|
Other
|
lineage3
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR3675385
|
Other
|
La1.7;lineage4.9
|
None
|
SRR1175127
|
Other
|
lineage2.2.1.2
|
None
|
ERR978765
|
RR-TB
|
lineage4.8
|
None
|
SRR1049673
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
ERR3797080
|
Sensitive
|
lineage4.9
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
SAMEA3501073
|
RR-TB
|
lineage4.8
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR176518
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SRR1169306
|
Other
|
La3;lineage4.9
|
None
|
ERR970449
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4816967
|
Other
|
lineage5
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR3675318
|
Other
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR978767_ERR978765_ERR978766
|
RR-TB
|
lineage4.8
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR13266892
|
MDR-TB
|
lineage3.1.2
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1173185
|
Other
|
lineage4.9
|
None
|
SRR1062871
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
SRR6785281
|
Other
|
lineage4.2.1.1
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR3283006
|
RR-TB
|
lineage4.9
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR12006550
|
Sensitive
|
lineage1.2.1.2
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
SRR6046878
|
Other
|
lineage4.9
|
None
|
ERR5311097
|
Sensitive
|
lineage4.2;lineage4.6.3;lineage4.9
|
None
|
ERR4817915
|
Other
|
lineage4.9
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR1180137
|
Other
|
lineage2.2.1
|
None
|
ERR9786986
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR3675222
|
Other
|
La1.7
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR3675270
|
Other
|
lineage4.9
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1183049
|
RR-TB
|
lineage2.2
|
None
|
SRR1173719
|
Other
|
lineage4.9
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
SRR3675501
|
Other
|
La1.7;lineage4.9
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
ERR4821172
|
RR-TB
|
lineage4.9
|
None
|
SRR3675492
|
Other
|
La1.7;lineage4.9
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR2513259
|
Other
|
lineage3
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR3275709
|
HR-TB
|
lineage3
|
nl
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
SRR12708371
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR3675267
|
Other
|
La1.7;lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR6045347
|
Other
|
lineage4.9
|
None
|
SRR6046593
|
Other
|
lineage4.9
|
None
|
SRR6046783
|
Other
|
La1.7;M.canetti;lineage4.9
|
None
|
ERR3797019
|
Other
|
La1.8.1
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR6046644
|
HR-TB
|
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR3439489
|
RR-TB
|
La1.8.1
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
ERR3290633
|
Other
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
ERR126597
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR3675449
|
Other
|
M.canetti;lineage4.9
|
None
|