Rv3596c - c.696C>G


Drug resistance types
50 Sensitive 18 RR-TB 38 HR-TB 22 MDR-TB 7 Pre-XDR-TB 3 XDR-TB 82 Other
lineage Counts
lineage Count
lineage4.9 78
La1.7;lineage4.9 10
lineage3 10
La3;lineage4.9 6
lineage4.4.1.2 2
lineage4.1.2.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.2.1 18
lineage4.2;lineage4.9 2
lineage4.3.3 2
3
lineage4.1.1.3 4
lineage4.1;lineage4.8 2
lineage4.1.1.3;lineage4.9 2
lineage1.2.1.2 1
M.canetti;lineage2.2 2
lineage4.1.2.1;lineage4.4.1 1
La1.7;M.canetti;lineage4.9 4
lineage4.3.2.1 1
La1.7 2
lineage4.8 5
lineage4.3.4.2.1 6
M.canetti;lineage2.2.2;lineage6.2 2
lineage4 2
lineage2.2 4
lineage4.1.2.1 5
lineage4.2.2.2 1
lineage4.1;lineage4.9 1
lineage4.4.1.1 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.8.1 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage3;lineage4 1
lineage2.2.1.2 2
lineage4.3.4.1 1
lineage1.1.2 1
lineage5.1.4 1
lineage4.6.3;lineage4.9 1
lineage3.1.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9;lineage6.1.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.5 1
La3;lineage2.1;lineage4.9 1
lineage4.3;lineage4.9 1
lineage4.4.2 1
La3;M.canetti;lineage4.9 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7;lineage3.1;lineage4 1
M.canetti;lineage4.9 1
lineage3.1.2 1
lineage4.2.1.1 1
lineage3;lineage4.9 1
lineage1.1.1;lineage4 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage1;lineage4.9 1
lineage4.2.1 2
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage4 1
lineage2.2;lineage4 1
lineage4.6.2.2 2
lineage5 1
spoligotype Counts
spoligotype Count
None 220
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR400336 Sensitive lineage4.9 None
ERR4820030 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR990545 Other lineage3 None
ERR4596902 MDR-TB lineage3 None
SRR6046564 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR176751 Other lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
SRR1062918 Other lineage3 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR11662690 HR-TB lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR212001 HR-TB None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR10808730 Other lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR6046878 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1173170 Other lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR3675222 Other La1.7 None
ERR3283040 HR-TB lineage4.9 None
ERR978765 RR-TB lineage4.8 None
SRR1049673 Pre-XDR-TB lineage3 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR6046046 Other lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4821172 RR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3275709 HR-TB lineage3 nl
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
SRR1169306 Other La3;lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR3675318 Other lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
SRR3675541 Sensitive lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR4812155 Other lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR3675229 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR3797062 RR-TB lineage4.9 None
ERR4819546 HR-TB lineage3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR473332 Other lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR1172796 Sensitive lineage2.2.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR16156697 RR-TB lineage2.2.1 None
SRR1173185 Other lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR26399265 Other lineage2.2.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR4815815 Sensitive lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR5341456 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9786843 Other None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR2517475 Other lineage4 None
ERR4797313 Sensitive lineage2.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR3675477 Sensitive lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
ERR4817915 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1140716 Other lineage3 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4811030 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR3675270 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR10315556 Sensitive lineage2.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR1173719 Other lineage4.9 None
SRR15316595 RR-TB lineage4.4.2 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR4817204 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR2513259 Other lineage3 None
SRR20969731 Other lineage2.2.1 None
SRR12708415 HR-TB lineage2.2.1 None
SRR3675455 Sensitive lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR4799025 Other lineage4.8 None
SRR14782054 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
SRR1175508 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR2514552 Sensitive lineage3 None
SRR5341323 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR3283021 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR13266892 MDR-TB lineage3.1.2 None
ERR4819383 RR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR12708416 Sensitive None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
SRR5341396 Other lineage3;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR11252612 Other La3;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR212033 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR1167384 Other La3;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR400529 Other lineage3 None
SRR6045359 Sensitive lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1175127 Other lineage2.2.1.2 None
ERR3797080 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR5535933 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR1165628 Other La3;lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR3675473 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
SRR5341345 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR3797015 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR11662694 Other lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4816967 Other lineage5 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None