Rv3596c - c.636G>C
Drug resistance types
5 Sensitive
30 RR-TB
4 HR-TB
21 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 18 |
| lineage3 | 4 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage2.2.1 | 15 |
| La1.7.1 | 1 |
| lineage2.2;lineage4 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.3.3 | 2 |
| lineage4.2.1 | 4 |
| lineage4.4.1.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.8 | 5 |
| lineage4.4.1.2 | 1 |
| lineage3.1.1 | 2 |
| 1 | |
| La1.7;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.8.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 77 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181403 | Other | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4817204 | Other | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR161037 | Other | lineage4.9 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR4829238 | Sensitive | lineage3 | None | ERR4817069 | RR-TB | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821276 | Sensitive | lineage3 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR7645928 | Other | lineage4.7 | None |
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