Rv0668 - c.1242G>C


Drug resistance types
60 Sensitive 34 RR-TB 54 HR-TB 53 MDR-TB 17 Pre-XDR-TB 3 XDR-TB 105 Other
lineage Counts
lineage Count
La1.7.X-unk4;lineage4.9 1
lineage4.9 86
lineage4.3.4.2.1 7
lineage2.2.1 37
La1.7;lineage4.9 6
La1.7.1 1
lineage4 3
lineage4.6.3;lineage4.9 2
lineage4.8 16
lineage3 22
lineage4.3 1
La1.7 2
lineage4.1;lineage4.8 2
lineage4.4 1
lineage4.1.1.3 5
La3;lineage4.3.4 1
lineage4.6.2.2 6
lineage4.9.1 3
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.3.3 7
lineage4.4.2 1
lineage4.6.3 1
La1.7.1;lineage4.9 1
lineage4.1.2.1 12
lineage4.1.1.3.1 1
M.canetti;lineage4.9 1
lineage3.1 1
lineage1.1.3.1 1
La1.4 1
lineage4.2.1 2
lineage2.2.2 4
La1.2.BCG 1
lineage4.3.2.1 4
lineage5.1.1 1
5
lineage4.4.1.1 2
lineage4.8.1 2
La1.8.1 3
lineage2.2.1;lineage4.9 1
La3;lineage4.9 2
lineage4.1.2.1;lineage4.4.1 1
lineage4.3.3;lineage4.8 4
lineage4.3.4.1 2
lineage4.2.2.1 1
lineage4.6.1.1 2
lineage4.3.4 1
lineage2.2 1
lineage4.8.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 1
lineage1;lineage4.9 1
lineage4.6.1.2 5
La1.3 1
La1.7.1;La1.7.X-unk4 1
La1;lineage4.9 1
lineage3.1.2 1
lineage4.4.1.1.1 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;M.canetti;lineage4.9 2
lineage1.2.2.1;lineage4.4.1.1 1
lineage3.1.3 1
lineage4.4.1.2 2
lineage4.7 2
lineage4.1.1.3.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
M.canetti;lineage4.9;lineage9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage3.1.2.1 3
lineage4.2.2.2 1
lineage4.1.2 1
lineage4.1.1.1 2
M.canetti;lineage1 1
lineage4.9;lineage9 1
lineage4.9;lineage6.3 1
lineage1.2.2.2 1
lineage1.2.1.2 2
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.3.3;lineage4.9 1
lineage4.1.2.1;lineage4.9 1
lineage2.2.1.1 2
lineage1.1.1 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 326
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1735596 RR-TB lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR6045053 Other lineage4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
ERR5865379 Pre-XDR-TB lineage2.2.1 None
SRR7645899 Other lineage2.2.1 None
ERR4821172 RR-TB lineage4.9 None
ERR4821276 Sensitive lineage3 None
ERR751317 Sensitive lineage4.9 None
SRR1181020 Other lineage2.2.1 None
ERR176741 Other lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR3275941 RR-TB lineage4.3 nl
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR2517457 Sensitive lineage3 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR4830353 Other La1.7 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4872269 XDR-TB lineage2.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
ERR4769433 RR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR13423649 Sensitive lineage2.2.1 None
ERR4816755 Other lineage4.1.1.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1062869 Sensitive lineage4.9.1 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR20969542 Other lineage4.4.2 None
ERR2446413 Sensitive lineage4.6.3 None
ERR3283021 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4799171 Pre-XDR-TB lineage4.8 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR9786619 Sensitive lineage4.8 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4817731 HR-TB lineage4.9 None
ERR978766 RR-TB lineage4.8 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR1047993 HR-TB lineage2.2.1 None
ERR473332 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
ERR4769452 Other lineage4.9 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR19303773 Other lineage4.6.2.2 None
SRR19303806 Sensitive lineage4.1.2.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR037504 Other lineage4.9.1 None
SRR16278274 Other La1.4 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR176777 Sensitive lineage4.3.4.2.1 mw
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR3675312 Sensitive lineage4.9 None
ERR212114 Other lineage4.3.4.2.1 None
ERR4798262 HR-TB La1.2.BCG None
SRR9971168 Other lineage4.3.2.1 None
SRR1062918 Other lineage3 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2027233 Sensitive lineage4.1.2.1 None
ERR751330 MDR-TB lineage5.1.1 None
ERR363456 Sensitive lineage4.9 None
ERR234659 Other None
SRR9971122 MDR-TB lineage4.8 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR323035 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
SRR1173281 Other lineage3 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR176778 HR-TB lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR038289 Other lineage4.3.3 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR11462861 Other La1.8.1 None
SRR6045002 RR-TB lineage4.9 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4817915 Other lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4796577 HR-TB None
SRR21240055 Other lineage4.1.2.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1140716 Other lineage3 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR1180137 Other lineage2.2.1 None
ERR4816762 Sensitive lineage4.9 None
SRR16149129 MDR-TB lineage4.2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR1180440 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR5162090 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
ERR4817204 Other lineage4.9 None
SRR18511647 Sensitive lineage2.2.1 None
SRR1049672 Other lineage3 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR19303775 Sensitive lineage3 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR181887 Other lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR6045347 Other lineage4.9 None
SRR29050859 Other lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4769495 Other La1.3 None
ERR4769450 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR7645901 MDR-TB lineage2.2.1 None
ERR4830887 Pre-XDR-TB lineage2.2.1 None
SRR29096178 Sensitive lineage4.9 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR4814639 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR11342667 MDR-TB lineage4.3.3 None
SRR23961542 Other La1;lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR19303931 Other lineage2.2.1 None
ERR4819877 HR-TB lineage4.9 None
ERR212138 HR-TB lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR13266892 MDR-TB lineage3.1.2 None
ERR4816466 HR-TB lineage4.9 None
ERR5311077 Other La1.8.1 None
ERR4769493 Other lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR4819546 HR-TB lineage3 None
ERR4816656 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR26399255 Sensitive lineage2.2.1 None
SRR29050928 Other lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
ERR4820586 Other lineage3 gb
ERR4815556 RR-TB lineage3 None
ERR4829238 Sensitive lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR1173770 Other lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR18572454 RR-TB lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR349330 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1181256 Other lineage4.9 None
SRR2100067 Other lineage4.3.3 None
SRR1181289 Other lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR1175474 Other lineage4.9 None
SRR17567887 Sensitive lineage4.4.1.2 None
SRR11349133 MDR-TB lineage4.3.3 None
SRR1140736 Other lineage4.1.2.1 None
ERR4819241 Other lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR11252736 Other lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4815121 HR-TB lineage4.6.2.2 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
ERR473323 HR-TB lineage4.9 None
SRR17567930 Sensitive lineage4.4.1.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR15508558 Sensitive lineage4.1.2.1 None
SRR7755655 Other lineage4.1.2.1 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4817667 HR-TB lineage4.8 None
SRR3675492 Other La1.7;lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3275548 Sensitive lineage3 nl
ERR067712 Sensitive lineage4.9 None
SRR11342682 Other lineage4.1.2 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR987707 MDR-TB lineage4.7 None
SRR16156775 Other lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR212123 Other lineage4.9 None
SRR29096943 Sensitive lineage3.1.2.1 None
SRR7131160 Sensitive lineage3 None
ERR970449 RR-TB lineage4.1.1.3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR161037 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3797043 Sensitive lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4812763 Other lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4797201 Other lineage1.2.2.2 None
SRR20969475 Other lineage1.2.1.2 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
ERR4596902 MDR-TB lineage3 None
ERR349298 Sensitive lineage4.9 None
ERR990545 Other lineage3 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR978767 RR-TB lineage4.8 None
SRR7535086 Other None
SRR29096784 Sensitive lineage4.9 None
SRR1013530 Other lineage4.9.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR1063849 HR-TB lineage4.9 None
SRR7236330 Other La1.8.1 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675441 Other lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR19303813 Sensitive lineage4.8 None
ERR2660539 Other lineage4.9 None
SRR1175473 Other lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR212125 HR-TB lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR3283018 HR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR19303774 Sensitive lineage4.1.2.1 None
SRR14066533 Sensitive lineage1.1.1 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR9786843 Other None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR11252664 Other lineage2.2.1 None
ERR4817069 RR-TB None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR369159 Sensitive lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR19303788 Sensitive lineage4.8 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR19303779 Sensitive lineage4.8 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR6046141 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045832 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4819314 Other lineage1.1.1 None
SRR1173170 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR176651 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR12015084 Other lineage4.8 None
SRR3675222 Other La1.7 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR6045359 Sensitive lineage4.9 None
ERR2515352 Sensitive lineage2.2.1 None
ERR5865378 Pre-XDR-TB lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR2446544 Sensitive lineage3 nl
ERR978765 RR-TB lineage4.8 None
SRR1049673 Pre-XDR-TB lineage3 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR18002941 RR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None