Rv0668 - c.1242G>C
Drug resistance types
50 Sensitive
38 RR-TB
87 HR-TB
54 MDR-TB
36 Pre-XDR-TB
2 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4 | 2 |
| lineage5.1.1 | 3 |
| lineage4.9 | 47 |
| lineage4 | 27 |
| lineage4.1.2.1 | 14 |
| lineage4.1.1.3 | 5 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.8 | 15 |
| lineage2.2.1 | 44 |
| lineage4.6.2.2 | 6 |
| lineage3 | 26 |
| 45 | |
| lineage4.3.3 | 8 |
| lineage4.7 | 2 |
| lineage4.3.4.2 | 2 |
| lineage2.2.2 | 8 |
| lineage2.2 | 16 |
| lineage2.2.1.1 | 3 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.3.2.1 | 4 |
| La1.8.1 | 3 |
| lineage4.4 | 2 |
| lineage1.2.1.2 | 2 |
| lineage4.2.2.1 | 1 |
| lineage3.1.1 | 2 |
| lineage1.1.1 | 3 |
| lineage4.4.1.2 | 2 |
| La1.4 | 1 |
| lineage4.4.1.1 | 3 |
| La1.7.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.6 | 1 |
| lineage4;lineage2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.6.3 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.2.1 | 4 |
| lineage4.3 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 2 |
| lineage1.2.2.2 | 1 |
| La1 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 347 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736817 | HR-TB | lineage4.3.4 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786619 | Sensitive | lineage4.8 | None | ERR751338 | Other | lineage5.1.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | ERR990545 | Other | lineage3 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013530 | HR-TB | lineage4.9 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013598 | HR-TB | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1013617 | MDR-TB | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048885 | MDR-TB | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048982 | HR-TB | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1049041 | MDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172713 | MDR-TB | lineage4.4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR16149129 | MDR-TB | lineage4.2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR15508558 | Sensitive | lineage4.1.2.1 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18002950 | MDR-TB | lineage2.2.1 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR19303775 | Other | lineage3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303776 | Other | lineage4.1.2.1 | None | SRR19303774 | Sensitive | lineage4.1.2.1 | None | SRR19303779 | Sensitive | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303788 | Sensitive | lineage4.8 | None | SRR19303806 | Sensitive | lineage4.1.2.1 | None | SRR19303813 | HR-TB | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR19303931 | Other | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | ERR176777 | Sensitive | lineage4.3.4.2.1 | mw | SRR20969542 | Other | lineage4.4.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR176779 | HR-TB | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814501 | Other | lineage4.2.2.2 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3675488 | HR-TB | None | SRR3105762 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR181744 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR3675222 | Other | None | SRR3675270 | HR-TB | None | SRR3675501 | HR-TB | None | ERR2446544 | Sensitive | lineage3 | nl | ERR1750907 | RR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675509 | Other | lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR3675510 | Other | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR212123 | Other | None | ERR4817069 | RR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR3275548 | Sensitive | lineage3 | nl | ERR212125 | HR-TB | lineage4 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816466 | HR-TB | None | ERR4816699 | Other | lineage4.6 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR2513054 | Other | lineage4.2.2.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR2513401 | HR-TB | lineage3 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4817998 | Other | lineage3 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | ERR2432997 | Other | lineage4.8 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR4818929 | HR-TB | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR2515352 | Sensitive | lineage2.2.1 | None | ERR2513682 | Sensitive | lineage3 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2514854 | Other | lineage4.3.3 | None | ERR4819842 | Other | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR1035138 | MDR-TB | None | ERR2693237 | Other | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR2517457 | Sensitive | lineage3 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR2660539 | Other | lineage4.9 | None | ERR2679270 | HR-TB | lineage4.1.2 | None | ERR4821276 | Other | lineage3 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR4830353 | Other | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046362 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR4829238 | Sensitive | lineage3 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | SRR6046644 | HR-TB | None | ERR4830887 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046460 | HR-TB | None | SRR6046609 | Sensitive | lineage4.9 | None | SRR6046834 | Sensitive | lineage4.9 | None | SRR6046815 | Other | lineage3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR6832644 | Other | lineage4.3.3 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131160 | Sensitive | lineage3 | None | SRR7585435 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7535086 | Other | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR038289 | Other | lineage4.3.3 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR323045 | HR-TB | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR1063858 | HR-TB | None | ERR10796571 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283041 | Other | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR1063859 | HR-TB | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283021 | HR-TB | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769419 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769472 | Other | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769495 | Other | La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4796577 | MDR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR5865378 | Pre-XDR-TB | lineage2.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR5865379 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6198317 | Other | La1.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None |
|---|
