EBG00000313339 - n.2959A>G


Drug resistance types
28 Sensitive 54 RR-TB 50 HR-TB 35 MDR-TB 30 Pre-XDR-TB 0 XDR-TB 193 Other
lineage Counts
lineage Count
lineage4.8 21
lineage1.1.3.1 4
lineage2.2.1 44
lineage4 31
lineage4.3.3 11
lineage4.9 80
lineage4.9;lineage3.1.1 1
lineage4.1.1 3
lineage4.1 2
19
lineage4.3.4.2.1 9
lineage1.2.2.2 3
lineage4.1.2.1 22
lineage3.1.2.1 3
lineage5 2
lineage2.2 5
lineage1.1.2 7
lineage3.1.3 2
lineage1.2.1.1 1
lineage3.1 1
lineage4.6.1.2 6
lineage3 29
lineage4.1.2 3
lineage4.5 2
lineage4;lineage2 1
lineage4.6.2.2 1
lineage2.2.2 4
lineage4.4.1.1 9
lineage4.3.4.2 2
lineage1 2
lineage6 2
lineage4.2.2.2 1
lineage6.3.1 1
lineage4.2.1 3
lineage4.1.1.3.1 2
lineage4.8.2 1
lineage1.1.1 3
lineage4.3.4.1 2
lineage4.2.2 3
lineage3.1.1 3
lineage4.9;lineage4.8 1
La1.8.1 2
lineage4.3.2.1 3
lineage4.7 1
lineage4.1.3 2
lineage4.1.1.3 3
lineage4.6.1.1 1
lineage5.1.1 1
lineage2.2.1.1 3
lineage4.4.2 4
lineage4.9;lineage4.3.4 1
lineage4.3.4 1
La1.2 1
La1.3 1
lineage4.9;La1.3 1
lineage1.1.1.1 1
lineage4.6.5 1
lineage4.6 1
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.4.1.1.1 1
lineage2.2.1.2 2
La2 1
La1.4 1
lineage7;lineage2.2.1.2 1
lineage1.2.1.2 1
lineage1.2.2 1
spoligotype Counts
spoligotype Count
None 390
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4814623 Other lineage4.8 None
ERR4814617 Other lineage1.1.3.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4814787 Sensitive lineage4.3.3 None
ERR4814681 Other lineage2.2.1 None
ERR4814700 Other lineage4.3.3 None
ERR4815471 Other lineage4.9 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR4814748 Other lineage4.8 None
ERR4814709 Other lineage4.1.1 None
ERR4815502 Other lineage4.1 None
SRR3675270 HR-TB None
SRR3675265 Other lineage4 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR4815517 Other lineage1.2.2.2 None
ERR4814976 Other lineage4.9 None
ERR4815550 Other lineage4 None
ERR4815792 Other lineage4.1.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
ERR4815572 Other lineage4.1.2.1 None
ERR4816928 HR-TB lineage1.2.2.2 None
ERR4816967 RR-TB lineage5 None
ERR4816964 Other lineage4.9 None
ERR4815901 Other lineage2.2 None
ERR4815910 Other lineage4.1.2.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR4815956 Other lineage1.1.2 None
ERR2027220 Other lineage3.1.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4816101 Other lineage4.1.2.1 None
ERR4816969 Other lineage4.8 None
ERR2027290 RR-TB lineage3.1 None
ERR4817060 RR-TB None
ERR4816270 Other lineage4.1.2.1 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816322 Other lineage4.9 None
ERR2229197 Sensitive lineage4 None
ERR4816397 Other lineage1.1.2 None
ERR4816417 Other lineage4.9 None
ERR4816464 Other lineage3 None
ERR4816531 Other lineage4.1.2 None
ERR4816510 Other lineage4.1.2.1 None
ERR2229198 MDR-TB lineage4.8 None
ERR216965 HR-TB lineage4.9 None
ERR2229233 Sensitive lineage4 None
ERR4816548 MDR-TB lineage4.5 None
ERR4816762 Other lineage4;lineage2 None
ERR4816692 Other lineage4.1.2.1 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816549 Other lineage2.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816756 RR-TB None
ERR4816852 Other lineage4.9 None
SRR5818386 Other None
ERR4815815 Sensitive lineage4 None
ERR4816866 Other lineage2.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR4033549 HR-TB lineage2.2.2 None
ERR4816868 Other lineage4.4.1.1 None
ERR4818710 Sensitive lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4817688 Other lineage4.3.4.2 None
ERR4817667 HR-TB lineage4.8 None
ERR4817735 Other lineage4.8 None
ERR4818988 Other lineage1 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4819007 Other lineage2.2.1 None
ERR4817874 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR2432997 Other lineage4.8 None
ERR4818787 MDR-TB lineage6 None
ERR3275190 Other lineage3 nl
ERR4818126 RR-TB lineage1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4819011 Other lineage3.1.2.1 None
ERR4819017 RR-TB lineage3 None
ERR4818831 Other lineage3 None
ERR4819073 Other lineage4.1.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818384 Other lineage4.8 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818869 Other lineage4.2.2.2 None
ERR4818930 Other lineage4.1.2.1 None
ERR4818440 Other lineage6.3.1 None
ERR4818536 Other lineage4.9 None
ERR2512770 Other lineage4.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818561 HR-TB lineage4 None
ERR4818570 Other lineage4.3.3 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR3275709 HR-TB lineage3 nl
SRR5007168 RR-TB lineage4.9 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007170 RR-TB lineage4.9 None
SRR5007165 MDR-TB lineage3 None
SRR5007204 Other lineage4.1.2.1 None
ERR4817554 Other lineage1.1.1 None
ERR4817584 MDR-TB lineage3 None
ERR4819096 Other lineage4.4.1.1 None
ERR4818624 Other lineage4.3.4.2.1 None
ERR2513681 Other lineage1.1.2 None
ERR4819357 Other lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4819192 Other lineage3 None
ERR4820256 Other lineage2.2.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819314 Other lineage1.1.1 None
ERR4820713 HR-TB lineage4.8 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4819383 RR-TB lineage4.9 None
ERR4820318 Other lineage4.2.2 None
ERR4819462 Other lineage4 None
ERR4820324 Other lineage4 None
ERR4819491 Other lineage4.1.2.1 None
ERR4819533 Other lineage1.1.2 None
ERR4820369 Other lineage2.2.1 None
ERR4819546 HR-TB lineage3 None
ERR2514389 Other lineage3 None
ERR4819555 Other lineage4.8 None
ERR4820408 Other lineage4.1.2.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819622 Other lineage4.1.2.1 None
ERR4819655 Other lineage4.8 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4820864 Other lineage4.9;lineage4.8 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4819766 Other lineage4.4.1.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4820503 Other lineage2.2.1 None
ERR4820829 Other lineage4.8 None
ERR4819872 HR-TB lineage4.4.1.1 None
ERR4819933 Other lineage4.9 None
ERR4819948 Other lineage4.4.1.1 None
ERR4819910 Other lineage4.9 None
ERR4820107 RR-TB None
ERR4820030 Other lineage4.9 None
ERR4820833 HR-TB None
ERR6359082 Other lineage4.9 None
ERR4820075 Other lineage4.1.2.1 None
ERR4821775 Other lineage4 None
ERR4820193 Other lineage3 None
ERR4821769 Other lineage4.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR2446509 Other lineage3 nl
SRR6045424 Other lineage1.1.2 None
ERR4821796 Other lineage4.1.1 None
ERR4821286 Other lineage4.8 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR5535933 HR-TB None
ERR2660539 Other lineage4.9 None
ERR4821214 RR-TB None
ERR4821245 Other lineage4.1.2.1 None
ERR4821811 RR-TB lineage4.9 None
SRR5431730 Other La1.8.1 None
ERR4821119 Other lineage4.4.1.1 None
SRR6046117 RR-TB lineage4.9 None
ERR4821222 Other lineage4.3.2.1 None
ERR4821310 Other lineage5 None
ERR4821288 Other lineage4.7 None
SRR6045664 Other lineage4.2.1 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821417 Other lineage1.1.3.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821679 Other lineage4.3.3 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR5818464 Other lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR5818436 Sensitive lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR6044838 Other lineage4.9 None
SRR6044769 Other lineage1.1.2 None
SRR6046210 Other lineage4 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045384 Other lineage4.1.2 None
SRR6045909 Other lineage4.8 None
SRR6045053 Other None
SRR6046020 Other lineage3 None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6045267 RR-TB lineage4 None
SRR6045359 Sensitive lineage4.9 None
SRR6046253 HR-TB lineage4.9 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046275 Other lineage3.1.1 None
SRR6046385 Other lineage4.9 None
SRR6046376 Other lineage3 None
ERR2851359 Other lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
ERR2851354 RR-TB lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046442 Other lineage3 None
ERR502473 Pre-XDR-TB lineage4.9 None
SRR6046815 Other lineage3 None
ERR323037 HR-TB lineage4 None
ERR502470 RR-TB lineage4.9 None
SRR6046839 Other lineage4.9 None
SRR6046878 HR-TB lineage4 None
ERR502478 RR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6789624 MDR-TB lineage4.1 None
SRR6832644 Other lineage4.3.3 None
SRR6982246 Sensitive lineage4 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR502517 MDR-TB lineage5.1.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971114 Other lineage2.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR9971168 Other lineage4.3.2.1 None
DRR188816 Sensitive lineage4.2.2 None
DRR188519 Other lineage4.4.2 None
ERR067712 HR-TB lineage4 None
ERR1063855 Other lineage4 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796565 RR-TB lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796571 Other lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796590 Other lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796576 RR-TB lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR10796626 Other lineage4.1.2 None
ERR10796597 Other lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR10796620 Other lineage4.1.1 None
ERR473323 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4 None
ERR10796627 Other lineage4 None
ERR10796628 Other lineage4.3.3 None
ERR10796629 Other lineage4 None
ERR10796633 RR-TB lineage4.3.4 None
ERR10796635 Other lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR4820798 Other lineage3.1.2.1 gb
ERR4821263 Other lineage4.1.3 gb
ERR4596902 HR-TB lineage3 None
ERR473283 Sensitive lineage2.2.1 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR473334 HR-TB lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4799513 HR-TB lineage2.2 None
ERR4769457 Other lineage4.9 None
ERR4796351 MDR-TB lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4769450 HR-TB None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4799025 Pre-XDR-TB None
ERR6197022 Other lineage4.9 None
ERR4811493 HR-TB None
ERR6197040 Other lineage4.9 None
ERR6197028 Other lineage4.9 None
ERR6358951 HR-TB lineage4 None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR6359069 Other lineage4.9 None
ERR736831 HR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR736837 Other lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
ERR9117704 Other lineage4.6 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR9117740 Other lineage3.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR9786076 Sensitive lineage3 None
ERR9787033 Sensitive lineage6 None
SRR10315567 Other lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1049672 Other lineage3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062928 RR-TB lineage4 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR10993951 RR-TB La1.6 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR11342634 MDR-TB lineage4.8 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1140736 RR-TB None
SRR11462861 Other La1.8.1 None
SRR1173281 RR-TB lineage3 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1173170 Other lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1180252 Other lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173740 Other None
SRR1181161 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR13888750 Other La2 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR14782405 HR-TB None
SRR14088362 Sensitive lineage3 None
SRR16156804 RR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR16278274 Other La1.4 None
SRR16370329 HR-TB lineage4.5 None
SRR16157123 Other lineage4.9 None
SRR1735596 RR-TB lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002980 Other lineage2.2.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR18003049 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18213726 Other lineage3 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR19303820 RR-TB lineage4.8 None
SRR18913742 Sensitive lineage3.1.3 None
SRR20969475 Other lineage1.2.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR20969731 Other lineage2.2.1 None
SRR20970016 Other lineage2.2 None
SRR22424787 Sensitive lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR21727760 Other lineage2.2.1 None
SRR22424765 MDR-TB lineage4 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR4815255 Other lineage4.4.2 None
ERR4815225 RR-TB lineage1.2.2 None
ERR4815118 Other lineage2.2 None
ERR4815171 HR-TB lineage1.1.2 None
ERR4815193 MDR-TB lineage4.8 None
ERR4814362 Other lineage4.8 None
ERR4815777 Other lineage4.9 None
ERR4815301 Other lineage4.4.2 None
ERR4814312 Other lineage4 None
ERR4815310 Other None