EBG00000313339 - n.2959A>G
Drug resistance types
28 Sensitive
31 RR-TB
40 HR-TB
32 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
95 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 6 |
| lineage2.2.1 | 28 |
| lineage4.8.1 | 3 |
| lineage5.1.1 | 1 |
| lineage4.9 | 72 |
| lineage4.2.1 | 4 |
| lineage4.1.2.1 | 6 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.3.3 | 9 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.8 | 12 |
| lineage4.4.1.1 | 6 |
| lineage1.1.1.1 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.3.4.2.1 | 10 |
| lineage4.1 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage2.2 | 3 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.2.2.2 | 2 |
| lineage3 | 15 |
| La1.8.1 | 4 |
| lineage4.1.1.1 | 4 |
| lineage1.2.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage2.2.2 | 4 |
| lineage4.3.2.1 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| La1.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 1 |
| 1 | |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1.3 | 2 |
| lineage4.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3;lineage4 | 1 |
| La1.3 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.4 | 1 |
| lineage4.4.2 | 1 |
| lineage4 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 244 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR502517 | Other | lineage5.1.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4816417 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR12708392 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4769450 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR4815502 | Other | lineage4.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR5535933 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4816322 | Other | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR6045548 | Other | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR14782054 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR7240476 | Other | La1.8.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4819876 | Other | lineage4.3.4.2.1 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4821796 | Other | lineage4.1.1.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR867572 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR5431730 | Other | La1.8.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4816464 | Other | lineage3 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173281 | Other | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR473283 | Sensitive | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4769418 | Other | La1.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR4814709 | Other | lineage4.1.1.1 | None | ERR4769452 | Other | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR6359082 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR4817060 | Other | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819017 | Other | lineage3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR9786076 | Other | lineage3 | None | SRR6046878 | Other | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | ERR4815225 | Other | lineage1.2.2.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR867574 | Other | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | DRR188816 | Other | lineage4.2.2 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816762 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR6046593 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR4769457 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR3275190 | Other | lineage3 | nl | SRR1173740 | Other | lineage3;lineage4 | None | SRR11342646 | HR-TB | lineage3 | None | ERR4769436 | Other | La1.3 | None | SRR1140716 | Other | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR16278274 | Other | La1.4 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR6045053 | Other | lineage4 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4799025 | Other | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045347 | Other | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR4818988 | Other | lineage1.2.2 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR13888750 | Other | La2 | None |
|---|
