EBG00000313325 - n.617T>C
Drug resistance types
45 Sensitive
6 RR-TB
9 HR-TB
8 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 16 |
| lineage2.2.1;lineage4 | 1 |
| lineage3 | 9 |
| lineage4.9 | 60 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4 | 2 |
| La1.3 | 5 |
| La1.8.1 | 4 |
| lineage1.1.1.1 | 1 |
| La1.2 | 1 |
| lineage4.4.1.1.1 | 2 |
| 1 | |
| lineage4.4.1.1 | 2 |
| lineage6.1.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage1.1.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| La2 | 1 |
| lineage1.2.1.2 | 1 |
| La1.4 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | DRR184982 | Other | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR2513259 | Other | lineage3 | None | SRR5818400 | Other | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR24255993 | MDR-TB | lineage4.3.3 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4769552 | Sensitive | La1.3 | None | ERR4820193 | Other | lineage3 | None | ERR867566 | Other | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR4769418 | Other | La1.2 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR5818389 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR5818459 | Other | lineage4.9 | None | ERR4796577 | HR-TB | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818394 | Other | lineage4.9 | None | SRR5818415 | Sensitive | lineage4.9 | None | SRR7617847 | Other | La1.8.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR5818386 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR5818464 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | SRR1180413 | Sensitive | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818455 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR7236399 | Other | La1.8.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR4769408 | Other | La1.3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818398 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR7069391 | Other | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR5818414 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR18714826 | MDR-TB | lineage4.3.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR7236374 | Other | La1.8.1 | None |
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