EBG00000313325 - n.617T>C
Drug resistance types
55 Sensitive
13 RR-TB
14 HR-TB
9 MDR-TB
15 Pre-XDR-TB
0 XDR-TB
91 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 16 |
| lineage3.1.2.1 | 1 |
| lineage4.9 | 74 |
| lineage4 | 12 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1 | 21 |
| lineage4.8 | 2 |
| lineage4.4.1.1 | 8 |
| 4 | |
| lineage1.1.2 | 1 |
| lineage1.1.1 | 3 |
| lineage4.1.1 | 3 |
| lineage6.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage1.1.1.1 | 1 |
| La1.8.1 | 3 |
| La1.3 | 7 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 3 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| La2 | 1 |
| lineage2.2.1.1 | 1 |
| La1.4 | 1 |
| lineage3.1.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.4.2 | 1 |
| La1.7.1 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 197 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816001 | Other | lineage3 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816964 | Other | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR5818386 | Other | None | ERR4817434 | Other | lineage3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | ERR3275190 | Other | lineage3 | nl | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818952 | Other | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR2513259 | Other | lineage3 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR6045480 | Other | lineage4.1.1 | None | ERR4820833 | HR-TB | None | ERR4820130 | Other | lineage3 | None | ERR4820193 | Other | lineage3 | None | ERR2446509 | Other | lineage3 | nl | SRR5818394 | Other | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818406 | Other | lineage4.9 | None | SRR5818415 | Sensitive | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818442 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818455 | Sensitive | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818463 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6832644 | Other | lineage4.3.3 | None | DRR184982 | RR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR10796597 | Other | lineage4 | None | ERR3439441 | Other | La1.8.1 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769436 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR5866420 | MDR-TB | lineage2.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR9786076 | Sensitive | lineage3 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | SRR11462861 | Other | La1.8.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR12199457 | Sensitive | lineage4.9;lineage1.1 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR16370694 | Sensitive | lineage4.1.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR19233762 | Sensitive | lineage4.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424884 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255993 | MDR-TB | lineage4.3.3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | ERR4815310 | Other | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR1750943 | Sensitive | lineage4 | None | ERR1750908 | Sensitive | lineage4 | None | ERR1750938 | Other | lineage4.4.1 | None |
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