EBG00000313325 - n.488G>A
Drug resistance types
9 Sensitive
14 RR-TB
4 HR-TB
18 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 45 |
| lineage2.2.1 | 14 |
| lineage2.2.1.1 | 2 |
| lineage2.2.2 | 1 |
| lineage3 | 3 |
| lineage4.8 | 1 |
| lineage4.3.3 | 1 |
| La1.7.1 | 1 |
| lineage2.2 | 2 |
| lineage4.1.2.1 | 6 |
| lineage3.1 | 1 |
| 4 | |
| lineage3.1.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.4.2 | 1 |
| La1.8.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4 | 3 |
| lineage4.3.4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.7 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.8;lineage4.3.3 | 4 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 102 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR21469201 | Other | La1.7.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR5818386 | Other | None | SRR5818426 | Other | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR4819720 | Other | lineage3.1.2.1 | gb | SRR5818458 | Other | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820188 | Other | lineage3 | gb | SRR5818398 | Other | lineage4.9 | None | SRR5818445 | Other | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | SRR5818393 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821887 | Other | lineage4.1.2.1 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818413 | HR-TB | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR5818446 | Other | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818444 | Sensitive | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR6045135 | Other | lineage3 | None | ERR5087596 | Other | La1.8.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR5818469 | Other | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | ERR2851354 | RR-TB | lineage4.9 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796597 | Other | lineage4 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1175473 | Other | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None |
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