EBG00000313325 - n.488G>A
Drug resistance types
47 Sensitive
8 RR-TB
0 HR-TB
11 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 105 |
| lineage2.2.1.1 | 1 |
| lineage2.2.1 | 13 |
| lineage4.8.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.3.3;lineage4.8 | 3 |
| lineage4.2.1 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage2.2.2 | 1 |
| lineage3 | 1 |
| La1.8.1 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 140 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175474 | Other | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR1208556 | Sensitive | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1208769 | Sensitive | lineage4.9 | None | SRR1202562 | Sensitive | lineage4.9 | None | SRR1208805 | Sensitive | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR1202603 | Sensitive | lineage4.9 | None | SRR1202721 | Sensitive | lineage4.9 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1208507 | Sensitive | lineage4.9 | None | SRR1209019 | Sensitive | lineage4.9 | None | DRR184982 | Other | lineage2.2.1 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818385 | Other | lineage4.9 | None | SRR1209000 | Other | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR1202597 | Other | lineage4.9 | None | SRR1208615 | Other | lineage4.9 | None | SRR1208793 | Other | lineage4.9 | None | SRR1208989 | Sensitive | lineage4.9 | None | SRR1208917 | Sensitive | lineage4.9 | None | SRR5818426 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR1208659 | Other | lineage4.9 | None | SRR1202407 | Other | lineage4.9 | None | SRR1209032 | Sensitive | lineage4.9 | None | SRR1202680 | Other | lineage4.9 | None | SRR1208886 | Other | lineage4.9 | None | SRR1208369 | Other | lineage4.9 | None | SRR1208565 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1202399 | Sensitive | lineage4.9 | None | SRR1202503 | Sensitive | lineage4.9 | None | SRR1208900 | Other | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR1208397 | Other | lineage4.9 | None | SRR1208498 | Sensitive | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR1202578 | Sensitive | lineage4.9 | None | SRR1202430 | Sensitive | lineage4.9 | None | SRR1202570 | Sensitive | lineage4.9 | None | SRR1208211 | Sensitive | lineage4.9 | None | SRR1208530 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | ERR4817915 | Other | lineage4.9 | None | SRR5818411 | RR-TB | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1202520 | Sensitive | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR1208436 | Other | lineage4.9 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR1208921 | Other | lineage4.9 | None | SRR5818393 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR1202713 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR1202434 | Sensitive | lineage4.9 | None | SRR1209057 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR5818386 | Other | lineage4.9 | None | SRR5818458 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR1202380 | Sensitive | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1208750 | Sensitive | lineage4.9 | None | SRR1202427 | Sensitive | lineage4.9 | None | SRR5818437 | RR-TB | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR1202708 | Other | lineage4.9 | None | SRR1208765 | Sensitive | lineage4.9 | None | SRR1208345 | Sensitive | lineage4.9 | None | SRR1208797 | Sensitive | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR1208327 | Sensitive | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR5818469 | Other | lineage4.9 | None | SRR1202735 | Sensitive | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR1208789 | Sensitive | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR1202414 | Sensitive | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR5818446 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1208758 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR1208661 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR1208575 | Sensitive | lineage4.9 | None | SRR5818445 | Other | lineage4.9 | None | ERR5087596 | Other | La1.8.1 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR1208334 | Other | lineage4.9 | None | SRR1208298 | Sensitive | lineage4.9 | None | SRR1208891 | Other | lineage4.9 | None | SRR1208897 | Other | lineage4.9 | None | SRR5818413 | Sensitive | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR1208313 | Other | lineage4.9 | None | SRR1208405 | Sensitive | lineage4.9 | None | SRR1208421 | Other | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR1208435 | Sensitive | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1209038 | Sensitive | lineage4.9 | None | SRR1202628 | Sensitive | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR1208506 | Sensitive | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | SRR1208460 | Other | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None |
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