EBG00000313339 - n.2134A>G
Drug resistance types
90 Sensitive
6 RR-TB
25 HR-TB
8 MDR-TB
13 Pre-XDR-TB
1 XDR-TB
114 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2;lineage4 | 1 |
| lineage4.9 | 178 |
| lineage3 | 4 |
| lineage2.2.1 | 16 |
| lineage5.1.1 | 1 |
| lineage2.2.1;lineage2.2.2 | 2 |
| lineage2.2.2 | 7 |
| lineage2.2.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.8 | 4 |
| lineage3.1.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 4 |
| lineage4.6.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4 | 2 |
| lineage3.1;lineage4 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2.1 | 5 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage4.2.2.2 | 1 |
| lineage5.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage6.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| La3;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 257 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1048886 | HR-TB | lineage2.2.2;lineage4 | None | SRR1183202 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183239 | Other | lineage4.9 | None | SRR1181569 | Other | lineage4.9 | None | SRR7443747 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283051 | Other | lineage4.9 | None | SRR1183193 | Other | lineage4.9 | None | SRR1183005 | Other | lineage4.9 | None | SRR1183325 | Other | lineage4.9 | None | SRR1183698 | Other | lineage4.9 | None | SRR7444101 | Sensitive | lineage4.9 | None | SRR1181422 | Other | lineage4.9 | None | SRR1180047 | Other | lineage4.9 | None | SRR1180074 | Sensitive | lineage4.9 | None | SRR1183093 | Other | lineage4.9 | None | ERR1140793 | Sensitive | lineage5.1.1 | None | SRR1181397 | Sensitive | lineage4.9 | None | SRR1180758 | Sensitive | lineage4.9 | None | SRR1183207 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR1181275 | Sensitive | lineage4.9 | None | SRR1048968 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1181244 | Other | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR1180724 | Other | lineage4.9 | None | SRR7444098 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR1183373 | Other | lineage4.9 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR1180020 | Other | lineage4.9 | None | ERR245790 | Sensitive | lineage4.3.4.2.1 | None | SRR1183369 | Other | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR7443725 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR1013596 | Sensitive | lineage3 | None | SRR1181194 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR7444099 | Sensitive | lineage4.9 | None | ERR10796599 | Other | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | SRR1181542 | Other | lineage4.9 | None | ERR181906 | Sensitive | lineage3.1.1 | mw | SRR1183677 | Sensitive | lineage4.9 | None | SRR1180735 | Other | lineage4.9 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR1183702 | Other | lineage4.9 | None | SRR1181287 | Sensitive | lineage4.9 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1180686 | Other | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR126603 | Sensitive | lineage4.3.3 | None | SRR7444103 | Sensitive | lineage4.9 | None | SRR1183421 | Sensitive | lineage4.9 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR1183456 | Other | lineage4.9 | None | SRR7443751 | Sensitive | lineage4.9 | None | SRR7443722 | Sensitive | lineage4.9 | None | SRR1183328 | Sensitive | lineage4.9 | None | SRR1183414 | Other | lineage4.9 | None | SRR1180204 | Other | lineage4.9 | None | SRR1181264 | Sensitive | lineage4.9 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR1183704 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1180745 | Other | lineage4.9 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR1182893 | Other | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR1013610 | Sensitive | lineage4 | None | SRR1181372 | Other | lineage4.9 | None | SRR1180031 | Other | lineage4.9 | None | SRR7444102 | Sensitive | lineage4.9 | None | SRR1181360 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180520 | Other | lineage4.9 | None | SRR1183686 | Sensitive | lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR405222 | Sensitive | lineage3.1;lineage4 | None | SRR1184329 | Other | lineage4.9 | None | SRR1180153 | Other | lineage4.9 | None | SRR1183377 | Sensitive | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | SRR1208476 | Other | lineage4.9 | None | SRR7443738 | Sensitive | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR1183152 | Other | lineage4.9 | None | SRR1181482 | Sensitive | lineage4.9 | None | SRR7443756 | Sensitive | lineage4.9 | None | ERR4819423 | Other | lineage4.6.2.2 | None | SRR7448503 | Sensitive | lineage4.9 | None | SRR1181580 | Other | lineage4.9 | None | SRR1196478 | Other | lineage4.9 | None | SRR1180106 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | SRR1183333 | Other | lineage4.9 | None | SRR1181577 | Other | lineage4.9 | None | SRR1181245 | Other | lineage4.9 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1182929 | Other | lineage4.9 | None | SRR1180518 | Other | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | SRR1180239 | Other | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR1181589 | Other | lineage4.9 | None | SRR1183717 | Other | lineage4.9 | None | SRR1183483 | Sensitive | lineage4.9 | None | SRR3725596 | Sensitive | lineage4.9 | None | SRR1183200 | Sensitive | lineage4.9 | None | SRR1183437 | Other | lineage4.9 | None | SRR1180018 | Sensitive | lineage4.9 | None | SRR1183305 | Other | lineage4.9 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR7444106 | Sensitive | lineage4.9 | None | SRR1181236 | Other | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1182954 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1183122 | Other | lineage4.9 | None | SRR1183023 | Sensitive | lineage4.9 | None | SRR7131160 | Sensitive | lineage3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR1034791 | MDR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR1180113 | Other | lineage4.9 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1181291 | Sensitive | lineage4.9 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR1183323 | Other | lineage4.9 | None | SRR1180083 | Sensitive | lineage4.9 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR1180705 | Other | lineage4.9 | None | SRR1183238 | Other | lineage4.9 | None | SRR7443726 | Sensitive | lineage4.9 | None | SRR1183092 | Other | lineage4.9 | None | SRR1180647 | Other | lineage4.9 | None | ERR1140792 | HR-TB | lineage5.1 | None | SRR1180459 | Other | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR1180094 | Other | lineage4.9 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR1181516 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR1183318 | Sensitive | lineage4.9 | None | SRR1209015 | Sensitive | lineage4.9 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR1183126 | Other | lineage4.9 | None | SRR1180024 | Other | lineage4.9 | None | SRR1208759 | Sensitive | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | SRR1181592 | Other | lineage4.9 | None | SRR1181573 | Other | lineage4.9 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1180095 | Other | lineage4.9 | None | SRR1183412 | Other | lineage4.9 | None | SRR1180164 | Other | lineage4.9 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1180209 | Other | lineage4.9 | None | SRR7443769 | Sensitive | lineage4 | None | SRR7444084 | Sensitive | lineage4.9 | None | SRR1180831 | Other | lineage4.9 | None | SAMN02360585 | HR-TB | lineage4.5 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1181226 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1180815 | Other | lineage4.9 | None | SRR1181496 | Other | lineage4.9 | None | SRR1183601 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR1180714 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR1183181 | Sensitive | lineage4.9 | None | SRR1183438 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR1181398 | Other | lineage4.9 | None | SRR1013613 | Sensitive | lineage2.2.1 | None | ERR9786076 | Other | lineage3 | None | SRR1181593 | Other | lineage4.9 | None | SRR1208721 | Other | lineage4.9 | None | SRR1182958 | Other | lineage4.9 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183113 | Sensitive | lineage4.9 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4829208 | Other | lineage4.8 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | ERR3283043 | Other | lineage4.9 | None | SRR1183688 | Sensitive | lineage4.9 | None | SRR1183606 | Sensitive | lineage4.9 | None | SRR1180144 | Sensitive | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183684 | Other | lineage4.9 | None | SRR1183603 | Other | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR1180610 | Sensitive | lineage4.9 | None | SRR7448505 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR1181488 | Sensitive | lineage4.9 | None | SRR7443724 | Sensitive | lineage4.9 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SRR1180482 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR1180737 | Other | lineage4.9 | None | SRR1183404 | Other | lineage4.9 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SRR1181286 | Other | lineage4.9 | None | SRR1181191 | Other | lineage4.9 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | SRR1180646 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR1182911 | Sensitive | lineage4.9 | None | SRR1183389 | Sensitive | lineage4.9 | None | SRR1183602 | Other | lineage4.9 | None | SRR1168955 | Sensitive | lineage4.2;lineage4.9 | None | SRR1181299 | Other | lineage4.9 | None |
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