EBG00000313339 - n.2134A>G
Drug resistance types
53 Sensitive
13 RR-TB
68 HR-TB
33 MDR-TB
31 Pre-XDR-TB
0 XDR-TB
83 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 3 |
| lineage4.8 | 10 |
| lineage4.3.3 | 11 |
| lineage4.4.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| 14 | |
| lineage2.2.1 | 30 |
| lineage2.2.2 | 16 |
| lineage4.4.1.1 | 3 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.9 | 66 |
| lineage3 | 10 |
| lineage4.6.1.1 | 3 |
| lineage4.6.2.2 | 6 |
| lineage4.1.2.1 | 17 |
| lineage4 | 16 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.5 | 4 |
| lineage6.3.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| La1.8.1 | 2 |
| lineage4.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.6.1 | 3 |
| lineage4.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3 | 1 |
| La1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage5.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage6 | 2 |
| lineage2.2 | 21 |
| lineage1.2.1.2 | 1 |
| lineage4.9;lineage2 | 1 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.4 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 281 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR181906 | Sensitive | lineage3.1.1 | mw | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4815178 | Other | lineage4.8 | gb | ERR4814298 | Sensitive | lineage4.3.3 | None | ERR4815255 | Other | lineage4.4.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3105762 | HR-TB | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR4814911 | Other | lineage4.3.3 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | SRR3675251 | Other | lineage4.3.3 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR4815471 | Other | lineage4.9 | None | ERR4815832 | Other | lineage3 | None | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | ERR4830769 | MDR-TB | lineage4.3.3 | ir | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4817349 | Other | lineage4.9 | None | ERR4816231 | Other | lineage4 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | ERR4816964 | Other | lineage4.9 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR4816227 | RR-TB | lineage3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR1034791 | RR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR2229687 | Sensitive | lineage4.8 | dk | ERR4817703 | Other | lineage1.1.1 | None | ERR4817709 | HR-TB | lineage4.6.2.2 | gb | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR4034391 | MDR-TB | lineage4.1.2.1 | None | ERR4818655 | Other | lineage4.3.3 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR4817919 | Other | lineage4.3.4.1 | gb | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817903 | Other | lineage4.1.2.1 | gb | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | ERR4819015 | Sensitive | lineage4.6.2.2 | gb | ERR2515055 | Other | lineage3 | None | ERR4818797 | Other | lineage4.5 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818249 | Other | lineage4.1.2.1 | gb | SRR4037516 | Sensitive | lineage2.2.1 | za | ERR4818897 | Other | lineage4.1.2.1 | gb | ERR245790 | Sensitive | None | ERR4818440 | Other | lineage6.3.1 | None | ERR4817547 | Other | lineage4.2.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SAMN02360577 | HR-TB | lineage3 | None | ERR2513296 | Other | lineage4.1.2.1 | gb | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4817645 | Other | lineage4.8 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4820324 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SAMN02360585 | HR-TB | lineage4.5 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819933 | Other | lineage4.9 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820829 | Other | lineage4.8 | None | ERR2515032 | Other | lineage3 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821775 | Other | lineage4 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR2041706 | MDR-TB | lineage2.2.1 | rs | SRR5382721 | Other | La1.8.1 | None | ERR2747622 | Sensitive | lineage4.9 | None | ERR4821940 | Other | lineage4.9 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR4821332 | Other | lineage4.1.2.1 | gb | SRR6045664 | Other | lineage4.2.1 | None | ERR4822114 | Other | lineage4.1.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044884 | Other | lineage3.1.1 | gb | ERR323035 | Sensitive | lineage4.9 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4829208 | RR-TB | lineage4.8 | None | ERR323037 | HR-TB | lineage4 | None | SRR6896601 | Sensitive | lineage4.3.4.2.1 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046737 | Other | lineage4.9 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR7131035 | Sensitive | lineage4.8 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR7585435 | Other | lineage4.9 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7131160 | Sensitive | lineage3 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR323057 | Sensitive | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796557 | Other | lineage4 | None | ERR3283008 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283051 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3439441 | Other | La1.8.1 | None | ERR405191 | Other | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6197032 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR751338 | Other | lineage5.1.1 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR9787336 | Other | lineage6 | None | ERR9787033 | Sensitive | lineage6 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013599 | HR-TB | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1013618 | MDR-TB | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048983 | HR-TB | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048982 | HR-TB | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049041 | MDR-TB | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR1106670 | Other | lineage4.9 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1172713 | MDR-TB | lineage4.4 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR15315833 | Sensitive | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303792 | Sensitive | lineage4.1.2.1 | None |
|---|
