EBG00000313325 - n.631A>G
Drug resistance types
14 Sensitive
48 RR-TB
6 HR-TB
40 MDR-TB
22 Pre-XDR-TB
0 XDR-TB
133 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 13 |
| lineage3 | 24 |
| lineage4.9 | 68 |
| 10 | |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3.3 | 6 |
| lineage4.8 | 10 |
| lineage4.2.2.2 | 2 |
| lineage2.2.1 | 38 |
| lineage4 | 11 |
| lineage3.1.1 | 3 |
| lineage1.1.2 | 3 |
| lineage4.7 | 2 |
| lineage4.3.1.1 | 2 |
| lineage1.2.2.2 | 3 |
| lineage4.3.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.3.4.1 | 2 |
| La1.8.1 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.4.2 | 2 |
| lineage4.9;lineage4.1 | 1 |
| lineage2.2.2 | 4 |
| lineage4.2.2 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.1.2 | 4 |
| lineage4.1.1 | 2 |
| lineage6 | 2 |
| lineage4.3.4 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.6 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.4 | 1 |
| La2 | 1 |
| lineage4.5 | 1 |
| La1.7.1 | 1 |
| lineage2.2 | 3 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3.1.2 | 2 |
| lineage5 | 1 |
| lineage3.1.3 | 1 |
| lineage3.1 | 1 |
| lineage1.1.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2.1 | 3 |
| lineage1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 263 |
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4820184 | MDR-TB | lineage3 | gb | SRR6046117 | RR-TB | lineage4.9 | None | SRR5818445 | Other | None | ERR4821214 | RR-TB | None | SRR5818399 | Sensitive | lineage4.9 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4822176 | Other | lineage4.1.1.2 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045614 | Other | lineage4.8 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818402 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR5818413 | HR-TB | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818430 | Sensitive | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818427 | HR-TB | lineage4.9 | None | SRR5818421 | Sensitive | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818462 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR5818469 | Other | lineage4.9 | None | SRR6045759 | RR-TB | lineage2.2.1 | gb | SRR6044904 | Other | lineage3 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046246 | Other | lineage3 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046376 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046541 | Other | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046839 | Other | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR3077931 | MDR-TB | lineage4.2.2.2 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR10796564 | Other | lineage4.3.3 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796563 | Other | lineage4.3.3 | None | DRR185024 | Other | lineage2.2.2 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR036207 | Other | lineage4.9 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796592 | Other | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796629 | Other | lineage4 | None | ERR10796627 | Other | lineage4 | None | ERR3806588 | Other | lineage6 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR10796634 | Other | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117788 | Other | lineage3 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140736 | RR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173310 | MDR-TB | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR13888750 | Other | La2 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423592 | MDR-TB | lineage2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18213726 | Other | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR19304094 | Other | lineage6 | None | SRR21469201 | Other | La1.7.1 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4815777 | Other | lineage4.9 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR22424884 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814699 | HR-TB | lineage4.1.2.1 | gb | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814714 | Other | lineage3 | None | ERR4815901 | Other | lineage2.2 | None | ERR1750926 | Other | lineage4.3.2.1 | za | SRR5818419 | Sensitive | None | SRR3675509 | Other | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814748 | Other | lineage4.8 | None | SRR3675265 | Other | lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815994 | Other | lineage3 | gb | ERR2027220 | Other | lineage3.1.3 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR3675565 | Other | lineage3 | None | ERR4816183 | Other | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | SRR5818426 | Other | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2432997 | Other | lineage4.8 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4820266 | RR-TB | lineage3 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | SRR5818458 | Other | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819456 | Other | lineage4.8 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4820889 | Other | lineage3 | gb | ERR4819636 | Other | lineage3.1.2 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR1023509 | Other | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4820030 | Other | lineage4.9 | None |
|---|
