EBG00000313339 - n.1248T>C


Drug resistance types
23 Sensitive 45 RR-TB 25 HR-TB 33 MDR-TB 20 Pre-XDR-TB 1 XDR-TB 108 Other
lineage Counts
lineage Count
lineage4.9 46
lineage4.3.3 6
lineage2.2.1 37
lineage1.2.2.2 1
La1.3 2
lineage4.3.4.2.1 7
lineage4.6.2.2 2
lineage4.8 47
lineage1.2.1.2 1
lineage4.2.1.1 1
lineage4.1.2.1 5
lineage4.6.1.2 4
1
lineage4.3.4.1 6
lineage4.1.1.3 8
lineage4.4.2 4
lineage3 11
lineage4.4.1.1 1
lineage3.1.1 4
lineage4.3.2.1 3
lineage4.3.3;lineage4.8 4
lineage6.2.3 1
lineage2.2.2 2
lineage4.2.1 11
La1.7.1 2
lineage5.1.1 2
lineage4.2.2.2 2
lineage1;lineage4.9 1
lineage4.1.2 2
lineage4 1
La1.7.1;La1.7.X-unk4 1
lineage4.8;lineage4.9 2
lineage4.2.2 1
lineage4.9.1 1
lineage4.7 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.3;lineage4.9 1
lineage4.6.5 1
lineage4.3 1
lineage2.2;lineage4 1
lineage6.1.2 1
lineage4.4 1
La1.8.1 4
lineage4.3.4.1;lineage4.9 1
La1.7.1;lineage4.9 1
lineage4.4.1.2 1
lineage3;lineage4 1
lineage4.1.1.2 1
lineage4.1.1.1 1
La1.4 1
lineage2;lineage4 1
lineage4.6.1.1 1
lineage2.2.1;lineage4.9 1
lineage6.3.1 1
lineage6.1.3 1
La1.2 1
spoligotype Counts
spoligotype Count
None 255
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR16156188 Sensitive lineage4.9 None
SRR6982141 Other lineage4.3.3 None
SRR10315567 HR-TB lineage2.2.1 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR176779 HR-TB lineage4.9 None
ERR4769436 Other La1.3 None
ERR11465626 Sensitive lineage4.3.4.2.1 None
ERR4819641 Other lineage4.6.2.2 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
ERR11465627 Sensitive lineage4.3.4.2.1 None
SRR1184329 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR502470 RR-TB lineage4.9 None
ERR3283051 Other lineage4.9 None
SRR1173185 Other lineage4.9 None
ERR2229147 Other lineage4.8 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SRR10214505 Sensitive lineage1.2.1.2 None
SRR1196478 Other lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
ERR11465490 Sensitive lineage4.1.2.1 None
ERR212114 Other lineage4.3.4.2.1 None
ERR2229811 Other lineage4.8 dk
ERR978754 RR-TB lineage4.8 None
SAMEA3501070 RR-TB lineage4.8 None
SAMEA3501067 RR-TB lineage4.8 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR4817069 RR-TB None
ERR978757 RR-TB lineage4.8 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR9971122 MDR-TB lineage4.8 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR13423546 Other lineage4.4.2 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR10796555 Other lineage4.1.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR017781 Other lineage3 None
ERR038289 Other lineage4.3.3 None
ERR4811101 Other lineage4.4.2 None
ERR978694 Other lineage4.8 None
SRR15508556 Other lineage4.3.4.1 None
SRR16156804 Sensitive lineage4.9 None
ERR4817915 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR5163959 Other lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1140712 MDR-TB lineage4.6.1.2 None
ERR560438 Other lineage4.9 None
ERR978750 RR-TB lineage4.8 None
SRR21714038 Sensitive lineage4.3.3 None
ERR3283046 Sensitive lineage4.9 None
SRR7645906 Other lineage2.2.1 None
ERR10796630 Other lineage6.2.3 None
SRR9971114 Other lineage2.2.1 None
ERR978755 RR-TB lineage4.8 None
ERR10796562 Other lineage4.3.4.1 None
SRR1181403 Other lineage4.9 None
ERR978761 Other lineage4.8 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR1180440 Other lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR1034765 HR-TB lineage4.3.3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR7645977 MDR-TB lineage4.2.1 None
SRR21469200 Other La1.7.1 None
ERR978694_ERR978693 Other lineage4.8 None
ERR751345 Other lineage5.1.1 None
ERR10796594 Other lineage4.9 None
ERR10796628 Other lineage4.3.3 None
ERR978756 Other lineage4.8 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR1173385 Sensitive lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SAMEA3501015 Other lineage4.8 None
ERR867526 MDR-TB lineage2.2.1 None
ERR4769423 Other La1.3 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
ERR2228838 Other lineage4.8 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR7645927 Other lineage4.8 None
ERR323045 HR-TB lineage1;lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
ERR2229198 Sensitive lineage4.8 None
ERR270777 HR-TB lineage4.1.2 None
ERR4811708 HR-TB lineage4 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR7645901 MDR-TB lineage2.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR2228890 Other lineage4.8;lineage4.9 None
SRR11342689 Other lineage4.1.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR978760 RR-TB lineage4.8 None
ERR1063862 HR-TB lineage4.9 None
SRR6046376 Other lineage3 None
ERR11466014 Sensitive lineage4.3.4.2.1 None
ERR11465192 Sensitive lineage4.3.4.2.1 None
ERR2229541 Other lineage4.8 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR1023509 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
ERR2886463 Sensitive lineage2.2.1 None
ERR10796578 Other lineage2.2.1 None
SRR16156697 RR-TB lineage2.2.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR037504 Other lineage4.9.1 None
ERR502517 Other lineage5.1.1 None
SRR9971112 Other lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
SAMEA3501046 RR-TB lineage4.8 None
SRR9971046 MDR-TB lineage4.8 None
SRR11342646 HR-TB lineage3 None
ERR181824 HR-TB lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR978734 RR-TB lineage4.8 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR7755643 Pre-XDR-TB lineage4.2.1 None
SRR6044952 Other lineage4.9 None
SRR7646018 MDR-TB lineage4.2.1 None
ERR978727 Other lineage4.8 None
ERR11465830 Sensitive lineage4.9 None
ERR10762275 MDR-TB lineage4.2.1 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR7645928 Other lineage4.7 None
ERR176580 Sensitive lineage4.3.4.2.1 None
ERR176651 Other lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR11465829 Sensitive lineage4.9 None
ERR2228910 Other lineage4.8 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
SRR023450 RR-TB lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR6046839 Other lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR2229436 Other lineage4.8 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
ERR7801175 HR-TB lineage4.6.5 None
SRR7645899 Other lineage2.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR978752 Other lineage4.8 None
ERR10796559 Other lineage4.9 None
ERR3275941 RR-TB lineage4.3 nl
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR14334195 Other lineage2.2.1 None
SRR6045603 Other lineage4.1.1.3 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR9787033 Sensitive lineage6.1.2 None
ERR978762 Other lineage4.8 None
ERR181887 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR978748 Other lineage4.8 None
ERR5087596 Other La1.8.1 None
ERR4816755 Other lineage4.1.1.3 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR20969542 Other lineage4.4.2 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR10796617 Other lineage4.3.4.1 None
ERR3283032 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR1180179 Pre-XDR-TB lineage3 None
ERR2229366 Other lineage4.8 None
ERR5311077 Other La1.8.1 None
ERR978747 Other lineage4.8 None
ERR3468488 Other La1.8.1 None
ERR3797062 RR-TB lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR2228900 Other lineage4.8 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3283043 Other lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR4820484 Sensitive lineage4.8 None
SRR1173740 Other lineage3;lineage4 None
ERR10762248 MDR-TB lineage4.2.1 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR8975044 Other lineage4.1.1.2 None
ERR978735 Other lineage4.8 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1792022 Other La1.8.1 None
SRR16278274 Other La1.4 None
ERR212125 HR-TB lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7131122 Other lineage2.2.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR5979454 Pre-XDR-TB lineage3 None
SAMEA3501052 RR-TB lineage4.8 None
ERR4830892 Pre-XDR-TB lineage2.2.1 None
SRR1735598 RR-TB lineage4.9 None
SRR7585400 MDR-TB lineage3 None
SRR7645971 Other lineage2.2.1 None
ERR3283008 Other lineage4.9 None
ERR1198990 Other lineage4.6.1.1 ug
ERR5979407 Other lineage3 None
SRR1173281 Other lineage3 None
SRR1181256 Other lineage4.9 None
SRR2100067 Other lineage4.3.3 None
SRR1140724 Other lineage2.2.1 None
ERR10796599 Other lineage4.8 None
SAMN02628522 Pre-XDR-TB lineage3 ir
ERR2513405 Other lineage2.2.1 None
SRR1173310 Other lineage3.1.1 None
SRR1175474 Other lineage4.9 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR2228810 Other lineage4.8;lineage4.9 None
SRR023487 RR-TB lineage2.2.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR978751 Other lineage4.8 None
ERR1815538 Other La1.7.1 None
SAMEA3501063 RR-TB lineage4.8 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR7755657 Other lineage4.8 None
SRR1049675 HR-TB lineage2.2.1 None
ERR978733 RR-TB lineage4.8 None
ERR4818440 Other lineage6.3.1 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR1173719 Other lineage4.9 None
ERR019855 Other lineage3 None
ERR4769554 RR-TB lineage4.9 None
SRR11342669 Other lineage4.8 None
ERR5162090 RR-TB lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR10796571 Other lineage4.9 None
ERR3806588 Other lineage6.1.3 None
DRR184982 Other lineage2.2.1 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR7851312 Other La1.2 None
ERR11465833 Sensitive lineage4.3.2.1 None
ERR108125 RR-TB lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
ERR970449 RR-TB lineage4.1.1.3 None