Rv3596c - c.874_876delTTGinsCTC
Drug resistance types
48 Sensitive
5 RR-TB
26 HR-TB
10 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 62 |
| lineage3 | 5 |
| lineage4.2.1 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.7 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| 2 | |
| lineage2.2.1 | 12 |
| lineage4 | 2 |
| lineage1.1.2 | 1 |
| La1.3 | 2 |
| lineage4.6.1.2 | 3 |
| lineage4.1.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| lineage4.1.1.3 | 1 |
| La1.7;lineage4.9 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.2.1 | 1 |
| La1.8.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 122 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341387 | Other | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4796577 | HR-TB | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR502474 | RR-TB | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769408 | Other | La1.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR2432997 | Other | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6044952 | Other | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR6046046 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR176651 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR6046210 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4797184 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4769493 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR28351442 | HR-TB | lineage3.1 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None |
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