EBG00000313325 - n.493A>G
Drug resistance types
27 Sensitive
52 RR-TB
15 HR-TB
47 MDR-TB
21 Pre-XDR-TB
0 XDR-TB
160 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 2 |
| lineage4.9 | 81 |
| lineage4.1.1.3 | 5 |
| lineage4.6.1.2 | 6 |
| lineage4.4.1.1 | 5 |
| lineage2.2.2 | 2 |
| lineage2.2.1 | 37 |
| lineage6 | 1 |
| lineage4.7 | 5 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4 | 15 |
| La2 | 1 |
| La1.8.1 | 3 |
| lineage2.2.1.1 | 3 |
| lineage4.4 | 1 |
| lineage4.8 | 22 |
| La1.7.1 | 1 |
| lineage4.4.2 | 4 |
| lineage4.3.3 | 8 |
| lineage4.3.4.2.1 | 4 |
| lineage1.2.2 | 1 |
| lineage2.2 | 2 |
| lineage3 | 17 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.1 | 7 |
| lineage4.1 | 2 |
| lineage4.1.2.1 | 23 |
| lineage4.3.4.2 | 2 |
| lineage1.2.1.1 | 1 |
| lineage5 | 1 |
| lineage3.1 | 1 |
| La1.8.2 | 1 |
| 9 | |
| lineage3.1.2.1 | 3 |
| lineage4.2.2.2 | 3 |
| lineage4.3.2.1 | 3 |
| lineage1 | 2 |
| lineage4.3.2 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1 | 2 |
| lineage4.1.3 | 1 |
| lineage4.3.1.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.1.2 | 3 |
| lineage4.2.1 | 4 |
| lineage1.1.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.6 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 322 |
Geographic prevalence
Country level data for this variant is available for 26 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9117827 | Other | lineage1.2.2.2 | None | ERR846990 | Sensitive | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR9787033 | Sensitive | lineage6 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4814312 | Other | lineage4 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815301 | Other | lineage4.4.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814623 | Other | lineage4.8 | None | ERR4814714 | Other | lineage3 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814775 | Other | lineage1.1.2 | None | ERR4815467 | Other | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815849 | Other | lineage3.1.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815053 | Other | lineage4.1.2.1 | gb | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815556 | RR-TB | lineage3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4815898 | Other | lineage3 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816133 | Other | La1.8.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816493 | Other | lineage4.1.2.1 | None | ERR2229760 | Other | lineage4.8 | dk | ERR4817069 | RR-TB | None | ERR4817175 | Other | lineage4.8 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816772 | Sensitive | lineage4.2.2.2 | gb | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818386 | Other | None | ERR4816756 | RR-TB | None | ERR4818691 | Other | lineage4.8 | None | ERR4816856 | Other | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR2245394 | Sensitive | lineage3.1.1 | no | ERR4816800 | Other | lineage4.8 | gb | ERR4817526 | Other | lineage4.4.1.1 | gb | SRR4033442 | Sensitive | lineage4.3.2.1 | za | SRR5818426 | Other | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817665 | Other | lineage4.8 | None | ERR4818988 | Other | lineage1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR3148155 | Sensitive | lineage4.3.2 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5818458 | Other | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR2513681 | Other | lineage1.1.2 | None | ERR4819166 | Other | lineage3 | gb | ERR4819198 | Other | lineage2.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819219 | Sensitive | lineage4.2.2.2 | gb | ERR4819555 | Other | lineage4.8 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820324 | Other | lineage4 | None | ERR4820334 | Other | lineage4.4.1.1 | gb | ERR4819456 | Other | lineage4.8 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR2514173 | Other | lineage4.5 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR4820484 | Other | lineage4.8 | None | ERR4819770 | Other | lineage4.8 | gb | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4821887 | Other | lineage4.1.2.1 | None | ERR2514943 | Other | lineage4.8 | gb | ERR4820586 | Other | lineage3 | gb | ERR4820833 | HR-TB | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR5818445 | Other | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820107 | RR-TB | None | ERR4820188 | Other | lineage3 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4822035 | Other | lineage4.8 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4822190 | Other | lineage1.1.3.1 | gb | ERR4821679 | Other | lineage4.3.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818393 | Other | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818404 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818411 | MDR-TB | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818410 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818413 | HR-TB | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818422 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818429 | Sensitive | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818446 | Other | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | SRR5818437 | MDR-TB | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818442 | Other | lineage4.9 | None | SRR5818456 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818453 | Sensitive | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818462 | Other | lineage4.9 | None | SRR5818469 | Other | lineage4.9 | None | SRR5818457 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045135 | Other | lineage3 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6046208 | Other | lineage4 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR6046291 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR4828984 | MDR-TB | lineage4.1.2.1 | it | SRR6046646 | Other | lineage4.7 | gb | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131054 | Sensitive | lineage4.1.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796627 | Other | lineage4 | None | ERR4797041 | Sensitive | lineage3 | in | ERR10796629 | Other | lineage4 | None | ERR10796635 | Other | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3439265 | Other | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796966 | MDR-TB | lineage2.2.1 | in | ERR10796628 | Other | lineage4.3.3 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3797060 | Other | La1.8.1 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR4811101 | Other | lineage4.4.2 | None |
|---|
