lineage | Count |
---|---|
lineage3 | 6 |
La1.8.1 | 1 |
lineage4.9 | 23 |
lineage2.2.1;lineage4.9 | 1 |
lineage4 | 1 |
lineage2.2.1 | 11 |
lineage2.2.1.1 | 1 |
lineage2.2;lineage4 | 1 |
lineage4.6.1.2 | 4 |
lineage4.3.2.1 | 1 |
lineage4.8 | 5 |
lineage4.6.1.1 | 1 |
1 | |
lineage4.2.1 | 1 |
lineage2.2.2 | 1 |
lineage4.3.4.2 | 1 |
lineage2.2;lineage4.9 | 1 |
La1.7.X-unk4 | 1 |
lineage3;lineage4 | 1 |
lineage4.1.2.1;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 64 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR1173281 | Other | lineage3 | None |
SRR5341365 | Pre-XDR-TB | lineage3 | None |
SRR11462861 | Other | La1.8.1 | None |
SRR6045002 | RR-TB | lineage4.9 | None |
ERR4769530 | RR-TB | lineage4.9 | None |
ERR4815310 | Other | lineage2.2.1;lineage4.9 | None |
ERR4817915 | Other | lineage4.9 | None |
ERR4798823 | HR-TB | lineage4 | None |
ERR4808964 | RR-TB | lineage2.2.1 | None |
ERR11252736 | Other | lineage4.9 | None |
ERR4769417 | Pre-XDR-TB | lineage4.9 | None |
ERR502481 | RR-TB | lineage4.9 | None |
SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4817204 | Other | lineage4.9 | None |
ERR4821172 | RR-TB | lineage4.9 | None |
SRR18909918 | Other | lineage2.2.1.1 | None |
SRR16156832 | RR-TB | lineage2.2;lineage4 | None |
ERR067712 | Sensitive | lineage4.9 | None |
ERR108125 | RR-TB | lineage4.9 | None |
ERR1063883 | HR-TB | lineage4.9 | None |
SRR16156188 | Sensitive | lineage4.9 | None |
SAMN02380990 | MDR-TB | lineage4.6.1.2 | None |
SRR10315567 | HR-TB | lineage2.2.1 | None |
ERR502478 | RR-TB | lineage4.9 | None |
SRR1184308 | Sensitive | lineage4.9 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
ERR4814639 | HR-TB | lineage4.9 | None |
SRR1196545 | Sensitive | lineage4.9 | None |
ERR5987263 | MDR-TB | lineage2.2.1 | None |
ERR4596902 | MDR-TB | lineage3 | None |
ERR978767 | RR-TB | lineage4.8 | None |
ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
SRR7535047 | RR-TB | lineage4.6.1.1 | None |
ERR3797062 | RR-TB | lineage4.9 | None |
SRR9971080 | RR-TB | lineage2.2.1 | None |
ERR4817069 | RR-TB | None | |
SRR1140712 | MDR-TB | lineage4.6.1.2 | None |
SRR14782539 | MDR-TB | lineage4.2.1 | None |
SRR9971114 | Other | lineage2.2.1 | None |
ERR978765 | RR-TB | lineage4.8 | None |
SRR1049673 | Pre-XDR-TB | lineage3 | None |
ERR4815079 | RR-TB | lineage3 | None |
ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
ERR502474 | RR-TB | lineage4.9 | None |
ERR9119733 | MDR-TB | lineage2.2.1 | None |
ERR9786592 | Other | lineage4.3.4.2 | None |
SAMEA3501073 | RR-TB | lineage4.8 | None |
SRR1049672 | Other | lineage3 | None |
ERR4815550 | Other | lineage2.2;lineage4.9 | None |
ERR4769508 | RR-TB | lineage4.9 | None |
SRR11972417 | MDR-TB | lineage2.2.1 | None |
ERR502479 | RR-TB | lineage4.9 | None |
ERR502473 | RR-TB | lineage4.9 | None |
SRR16157123 | Other | lineage4.9 | None |
SRR1049581 | MDR-TB | lineage4.6.1.2 | None |
ERR978766 | RR-TB | lineage4.8 | None |
ERR3445487 | Other | La1.7.X-unk4 | None |
SRR1173740 | Other | lineage3;lineage4 | None |
SRR16156697 | RR-TB | lineage2.2.1 | None |
SRR9971113 | Other | lineage2.2.1 | None |
SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None |
SRR9971112 | Other | lineage2.2.1 | None |
ERR3283006 | RR-TB | lineage4.9 | None |
SRR1049582 | MDR-TB | lineage4.6.1.2 | None |