Rv3596c - c.687G>C


Drug resistance types
57 Sensitive 13 RR-TB 36 HR-TB 31 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 50 Other
lineage Counts
lineage Count
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.3;lineage4.8 4
lineage2.2.1 14
lineage4.9 70
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage1.2.2.2 2
lineage4.3;lineage4.9 1
La2;lineage2.2 1
lineage2;lineage4.9 1
lineage4.8 6
lineage4.1.1.3 5
La1.7;lineage4.9 9
lineage2.2.1;lineage4.9 2
lineage3 6
La1.7.1;La1.7.X-unk4 1
lineage4.6.1.2 2
lineage4.1.2.1 2
La1.8.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
M.canetti;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2;lineage4 1
M.canetti;lineage4.2 1
lineage4.3.3 2
lineage4.6.4;lineage4.9 1
lineage3.1.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 2
La1.7 2
lineage2.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage2.2.2 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.3 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.3.4.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.1.1.3.1 1
1
lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.3.4.2.1 3
lineage4.3.4 1
lineage4.4.1.1.1 1
La2;lineage4.9 1
lineage4.3.2.1 3
lineage1;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage4 3
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage3.1.2 1
lineage4.1.1.1 1
lineage4.2.1.1 1
lineage1.1.2 1
La1.2.BCG 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.7 1
La1.6;lineage4 1
spoligotype Counts
spoligotype Count
None 194
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR28351584 HR-TB lineage2.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4797285 MDR-TB lineage1.2.2.2 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR1180391 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR22424765 HR-TB lineage4.8 None
SRR1172717 Sensitive lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR3675492 Other La1.7;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR3275709 HR-TB lineage3 nl
SRR12708371 HR-TB lineage4.1.1.3 None
SRR3675446 RR-TB lineage4.9 None
ERR181887 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR1181283 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR4769474 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR176779 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR3439489 RR-TB La1.8.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
ERR4596910 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR2432997 Other lineage4.8 None
ERR1023502 MDR-TB lineage2;lineage4 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR736831 Other lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR28351444 MDR-TB lineage3 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1180355 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR6832787 Sensitive lineage2.2.1 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
ERR2513405 Other lineage2.2.1 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR4815471 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR400529 Other lineage3 None
SRR3675222 Other La1.7 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR1181403 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR978765 RR-TB lineage4.8 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1180345 Other lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1792478 HR-TB La1.7.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR3275941 RR-TB lineage4.3 nl
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR6359069 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4596902 MDR-TB lineage3 None
ERR323037 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4819546 HR-TB lineage3 None
ERR1023509 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR3797086 Sensitive lineage4.9 None
SRR1173185 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR3797081 Sensitive lineage4.9 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR6359070 Sensitive lineage4.9 None
ERR4817069 RR-TB None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
ERR4817915 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180440 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4817204 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR12708415 HR-TB lineage2.2.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR16156188 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR7496471 Sensitive lineage4 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR8975532 HR-TB lineage4.3.2.1 None
SRR1180446 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR13266892 MDR-TB lineage3.1.2 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR1180413 Sensitive lineage4.9 None
ERR9992879 XDR-TB lineage4.3.3 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR1196478 Other lineage4.9 None
SRR6785281 Other lineage4.2.1.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR4798262 HR-TB La1.2.BCG None
ERR473334 HR-TB lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR181824 HR-TB lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675502 Sensitive lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1180312 Sensitive lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None