EBG00000313339 - n.979A>T
Drug resistance types
197 Sensitive
66 RR-TB
119 HR-TB
104 MDR-TB
51 Pre-XDR-TB
1 XDR-TB
255 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 111 |
| lineage4.4.1.1 | 14 |
| lineage3 | 37 |
| lineage4;lineage2 | 1 |
| lineage4.1.1.3 | 12 |
| lineage4.6.1.2 | 5 |
| lineage4.1.2.1 | 39 |
| lineage2.2.2 | 7 |
| lineage2.2 | 9 |
| lineage4 | 130 |
| lineage4.8 | 42 |
| lineage3.1.2.2 | 3 |
| La1.8.1 | 15 |
| lineage4.3.4.2 | 8 |
| lineage4.1.2 | 4 |
| lineage2.2.1 | 106 |
| lineage3.1.3 | 3 |
| lineage4.1 | 3 |
| lineage4.3.4.2.1 | 10 |
| lineage4.1.1.3.1 | 2 |
| 81 | |
| lineage4.3.3 | 15 |
| lineage4.3.2.1 | 5 |
| lineage1.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage1.1.2 | 8 |
| lineage6.1.3 | 2 |
| lineage4.7 | 6 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage3.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.4 | 2 |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 5 |
| lineage4.3.1.1 | 1 |
| lineage1.1.3.3 | 2 |
| lineage4.2.1 | 7 |
| lineage6.3.1 | 2 |
| lineage4.1.4 | 1 |
| lineage1.2.2.2 | 3 |
| lineage4.6.5 | 1 |
| lineage2.1 | 3 |
| lineage4.3.2 | 2 |
| lineage5.2 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.2.1.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.3.4.1 | 4 |
| lineage5.1.1 | 1 |
| lineage6.2.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.4.2 | 6 |
| lineage1.1.1.1 | 2 |
| lineage4.9.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage5.1.2 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 6 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage4.5 | 4 |
| lineage4.3.4 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.6.2.2 | 3 |
| lineage6 | 3 |
| lineage1.2.1.2 | 2 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.2.2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| La1.7.1 | 3 |
| lineage1.2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 793 |
Geographic prevalence
Country level data for this variant is available for 43 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4817434 | Other | lineage3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817301 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | SRR4033523 | Other | lineage2.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817840 | Other | lineage3.1.2.2 | gb | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818670 | Other | La1.8.1 | gb | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | ERR228180 | Sensitive | lineage3 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | ERR4817998 | Other | lineage3 | None | ERR2510764 | Pre-XDR-TB | lineage4.8 | it | SAMEA3450033 | Other | lineage4.8 | None | ERR4818873 | Other | lineage4.1.2 | gb | ERR2510804 | Other | lineage2.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR2446566 | Other | lineage4.1 | None | ERR2432997 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818879 | Sensitive | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818313 | Other | lineage2.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2509891 | Other | lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818904 | Other | lineage4.8 | None | SRR5007199 | Other | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5341453 | Sensitive | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4819093 | Other | lineage4.3.3 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341396 | Other | lineage4 | None | ERR2513762 | Sensitive | lineage3 | gb | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR4820484 | Other | lineage4.8 | None | SRR5341456 | Other | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR1023509 | Other | None | ERR4819910 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341323 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2517475 | Other | lineage4 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6045503 | HR-TB | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4821276 | Other | lineage3 | None | ERR4821746 | Other | lineage4.4.1.1 | gb | ERR4821288 | Other | lineage4.7 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046210 | Other | lineage4 | None | SRR5818588 | Sensitive | lineage4.1.2.1 | dj | SRR6045778 | Other | lineage3.1 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6045892 | Sensitive | None | SRR6044838 | Other | lineage4.9 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044896 | Other | lineage4.8 | gb | SRR6045999 | Sensitive | lineage4.8.2 | gb | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045022 | Other | lineage3.1.1 | None | SRR6045053 | Other | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046020 | Other | lineage3 | None | SRR6046016 | Other | lineage4.3.1.1 | gb | SRR6045158 | Other | lineage4.9 | None | SRR6046046 | Other | None | SRR6045178 | Other | lineage3 | None | SRR6045217 | Other | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045261 | Other | lineage1.1.2 | gb | SRR6045424 | Other | lineage1.1.2 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046376 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046299 | HR-TB | None | SRR6046359 | Other | lineage4.7 | None | ERR4829231 | Sensitive | lineage6.3.1 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR4829247 | MDR-TB | lineage4.3.3 | None | ERR4829488 | MDR-TB | lineage4.1.2.1 | it | ERR4830864 | MDR-TB | lineage4.4.1.1 | sz | ERR4830674 | Sensitive | lineage4.1.2.1 | dz | ERR4829615 | Sensitive | lineage4.3.3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR4829767 | HR-TB | lineage4.8 | None | ERR4829645 | Sensitive | lineage4.1.2.1 | it | ERR4829692 | Sensitive | lineage4.1.2.1 | None | ERR4828962 | Other | lineage4.1.4 | it | SRR6046442 | Other | lineage3 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046802 | Other | lineage4 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | SRR6511621 | HR-TB | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831826 | MDR-TB | lineage2.2.1 | vn | ERR4831638 | Sensitive | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831739 | MDR-TB | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR6896545 | Other | lineage4.9 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR502943 | HR-TB | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502525 | Sensitive | lineage6.2.1 | gh | ERR5087846 | Other | La1.8.1 | None | ERR5087596 | Other | La1.8.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR3275190 | Other | lineage3 | nl | ERR5087486 | Other | La1.8.1 | None | SRR7131075 | Other | lineage4.8 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR7131032 | Other | lineage2.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131131 | Sensitive | lineage6.3.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR7131234 | Other | lineage4.9 | None | SRR7496471 | Sensitive | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR8217918 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323107 | Other | lineage4 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323045 | HR-TB | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR036207 | Other | lineage4.9 | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR037504 | Other | lineage4.9.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1035122 | Sensitive | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1063859 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063858 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR1063896 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796588 | Other | lineage4 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796634 | Other | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797067 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769480 | Other | La1.3 | None | ERR4769423 | Other | La1.3 | None | ERR473332 | Other | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR4769427 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769516 | Other | La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769514 | Other | La1.3 | None | ERR4769548 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769552 | Other | La1.3 | None | ERR4796257 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797350 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4797974 | Other | lineage1.1.2 | in | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4811493 | HR-TB | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | ERR4811030 | Sensitive | None | ERR4811708 | HR-TB | lineage4 | None | ERR4812155 | Sensitive | None | ERR4812474 | Sensitive | lineage4.3.3 | pe | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR5908124 | Other | lineage4.8 | None | ERR5917683 | Sensitive | lineage4.1.2.1 | by | ERR6197030 | Other | lineage4.9 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6866022 | Other | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736848 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR752229 | Other | lineage4.5 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9117759 | Other | lineage3 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119120 | Other | lineage4.8 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9119669 | HR-TB | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR10272572 | Sensitive | lineage4.4.1.1 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787362 | Sensitive | lineage6 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9787030 | Sensitive | lineage6 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315709 | MDR-TB | lineage2.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049672 | Other | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10808805 | Sensitive | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172075 | Pre-XDR-TB | lineage3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140736 | RR-TB | None | SRR1173834 | Other | lineage4.6.1.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173310 | MDR-TB | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972215 | RR-TB | lineage4.5 | None | SRR1180179 | Pre-XDR-TB | lineage3 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183034 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR14296220 | Other | La1.8.1 | None | SRR14801749 | Sensitive | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16058218 | MDR-TB | lineage4.3.4.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16058205 | HR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1735634 | Sensitive | lineage4.1.2.1 | gb | SRR1791747 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002877 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003036 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19304083 | Other | lineage4.4.1.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR18911232 | Sensitive | lineage1.2.2.2 | None | SRR19303899 | Other | lineage3 | None | SRR19303907 | Other | lineage4.8 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR21675425 | HR-TB | lineage4.8 | None | SRR20995191 | Sensitive | lineage4.4.1.1 | None | SRR2100537 | Sensitive | lineage3 | None | SRR21469200 | Other | La1.7.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR2100532 | Sensitive | lineage3 | None | SRR21469201 | Other | La1.7.1 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR21726726 | Sensitive | lineage4.1.2.1 | None | SRR21727728 | Sensitive | lineage4.4.1.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR21727888 | Other | lineage1.2.1.2 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815310 | Other | None | ERR1815538 | Other | La1.7.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR3675209 | Sensitive | lineage4.9 | None | ERR171135 | Other | lineage2.2.1 | za | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814705 | Sensitive | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675227 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR1750874 | Sensitive | lineage4.8 | bw | ERR1750902 | Sensitive | lineage2.2.1 | za | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR1750898 | Sensitive | lineage4.1.1.3 | zw | ERR1750899 | Sensitive | lineage4.1.1.3 | zw | ERR4814776 | Sensitive | lineage3 | None | ERR1750921 | Sensitive | lineage4.1.1.3 | None | ERR1750929 | Sensitive | lineage4.1.1.3 | za | SRR3675270 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675252 | RR-TB | lineage1.1.2 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675279 | Other | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815550 | Other | lineage4 | None | SAMN02628522 | Pre-XDR-TB | lineage3 | ir | ERR176651 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | ERR181887 | HR-TB | None | SRR3675509 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR4815079 | RR-TB | lineage3 | None | ERR2027232 | Other | lineage4.3.4.2 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675513 | Other | lineage4.8 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816112 | Sensitive | lineage4.1.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR2041685 | MDR-TB | lineage2.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR3675553 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None |
|---|
