EBG00000313339 - n.979A>T
Drug resistance types
151 Sensitive
55 RR-TB
84 HR-TB
73 MDR-TB
29 Pre-XDR-TB
2 XDR-TB
226 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 23 |
| La1.2 | 1 |
| lineage4.9 | 225 |
| lineage2.2.1.1 | 4 |
| La1.3 | 4 |
| lineage2.2.1 | 75 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.8 | 51 |
| lineage2.2.2 | 7 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 6 |
| La3;lineage4.9 | 7 |
| lineage4 | 5 |
| lineage4.1.1.1 | 2 |
| lineage4.1.1.3 | 7 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.3.2.1 | 3 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.3 | 1 |
| lineage4.3.4.2.1 | 11 |
| La1.8.1 | 13 |
| lineage3 | 20 |
| lineage1.1.2 | 2 |
| lineage3;lineage4 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| lineage4.3.3 | 10 |
| La1.7;lineage4.9;lineage7 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.2.1 | 6 |
| La1.2.BCG | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage3.1.1 | 5 |
| La1;lineage4.9 | 3 |
| lineage4.4.2 | 6 |
| lineage4.3.4.1 | 4 |
| La1.7;lineage4.9 | 7 |
| lineage4.1.3 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage3.1.3 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage6.1.2 | 2 |
| lineage4.4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.7 | 4 |
| La1.7.1;lineage4.9 | 1 |
| lineage6 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage2.2.1.2 | 2 |
| lineage1.1.1.1 | 2 |
| lineage4.6.1.1 | 2 |
| lineage2.2 | 4 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| 2 | |
| lineage4.2.1.1 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage5.2 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1.1.1 | 1 |
| La1.7.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.5 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.9.1 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.8.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La1.6 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La3;lineage4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| lineage6.2.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 620 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769427 | Other | La1.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR4769408 | Other | La1.3 | None | ERR4769423 | Other | La1.3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR14782054 | Other | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR18002937 | Other | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR4811708 | HR-TB | lineage4 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR3675389 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR911930 | Other | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR3675318 | Other | lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR10796593 | Other | lineage4.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR9119120 | Other | lineage4.8 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | ERR4769480 | Other | La1.3 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR1184329 | Other | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR8975044 | Other | lineage4.1.1.2 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | SRR1792022 | Other | La1.8.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR19303899 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | SRR7070144 | Other | lineage4.8 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR1173770 | Other | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR5341387 | Other | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR10808730 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR1181256 | Other | lineage4.9 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR2100067 | Other | lineage4.3.3 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR19303907 | Other | lineage4.8 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | SAMN02628522 | Pre-XDR-TB | lineage3 | ir | SRR1173310 | Other | lineage3.1.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR7131061 | Other | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4817915 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR978751 | Other | lineage4.8 | None | ERR4818904 | Other | lineage4.8 | None | DRR184982 | Other | lineage2.2.1 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR363490 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR9787033 | Sensitive | lineage6.1.2 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR400345 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4812328 | Other | lineage4.3.3 | pe | ERR363474 | Sensitive | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR4796351 | Sensitive | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR4820030 | Other | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR9787362 | Sensitive | lineage6 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR363502 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR4769516 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR373947 | Other | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR4799513 | HR-TB | lineage2.2 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR1173182 | Other | lineage4.6.1.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR12708416 | Sensitive | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR11662690 | HR-TB | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR21686597 | Sensitive | lineage4.1.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR978694 | Other | lineage4.8 | None | SRR7496523 | Other | lineage4.7 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR10796592 | Other | lineage4.9 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR1815538 | Other | La1.7.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR9786597 | Other | lineage4.6.2.2 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR752229 | Other | lineage4.5 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR3797029 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR1175127 | Other | lineage2.2.1.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR171135 | Other | lineage2.2.1 | za | SAMEA3501015 | Other | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | ERR5908124 | Other | lineage4.8 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR978762 | Other | lineage4.8 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR2446566 | Other | lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | SRR5341330 | Other | lineage4.9 | None | ERR5087596 | Other | La1.8.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR19304104 | Other | lineage4.8 | None | ERR5087846 | Other | La1.8.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR6046376 | Other | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1180179 | Pre-XDR-TB | lineage3 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR473332 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | ERR4769452 | Other | lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR7069074 | Other | lineage3 | None | SRR1238558 | Other | lineage4.9 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1792011 | Other | La1.8.1 | None | ERR10796566 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR038289 | Other | lineage4.3.3 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR15508556 | Other | lineage4.3.4.1 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR6045002 | RR-TB | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR7236177 | Other | La1.8.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | ERR10796560 | Other | lineage4.9 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR176651 | Other | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | SRR1238559 | Other | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR6046839 | Other | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR5535933 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341400 | Sensitive | lineage4.9 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR3675292 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR1180440 | Other | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR18003042 | Other | lineage2.2.1 | None | ERR369151 | Other | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797067 | Other | La1.8.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR502525 | Sensitive | lineage6.2.1 | gh | ERR6358979 | Other | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR10796634 | Other | lineage4.7 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR1140716 | Other | lineage3 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR7755657 | Other | lineage4.8 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR7131075 | Other | lineage4.8 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR14296220 | Other | La1.8.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172075 | Pre-XDR-TB | lineage3 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1792025 | Other | La1.8.1 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR369158 | Other | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR21469200 | Other | La1.7.1 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR3675265 | Other | lineage4 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR978756 | Other | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6824501 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None |
|---|
