Rv0668 - c.1368G>C
Drug resistance types
32 Sensitive
39 RR-TB
4 HR-TB
26 MDR-TB
20 Pre-XDR-TB
1 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2.1 | 17 |
| lineage4.8 | 8 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage4.9 | 58 |
| lineage4.2.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4 | 6 |
| La1.8.1 | 1 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage5.1.1 | 1 |
| lineage2.2.2 | 2 |
| lineage4.3.3 | 2 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage3 | 11 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.1.2.1 | 6 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| 7 | |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage2 | 1 |
| La2 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.4.1.1 | 3 |
| lineage3.1.1 | 2 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 162 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283043 | Other | lineage4.9 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815310 | Other | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815694 | Sensitive | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814623 | Other | lineage4.8 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR2228965 | Other | lineage4.8 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR3675571 | HR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4820324 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820833 | HR-TB | None | ERR2515032 | Other | lineage3 | None | ERR4820030 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046839 | Other | lineage4.9 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6046737 | Other | lineage4.9 | None |
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