lineage | Count |
---|---|
lineage4.3.2.1 | 2 |
lineage4.3.3 | 3 |
lineage4.9 | 52 |
La1.3 | 1 |
lineage3.1.1;lineage4.9 | 1 |
lineage4.8 | 9 |
lineage4.3.4.2.1 | 5 |
lineage1.1.2 | 1 |
La1.7.X-unk4 | 1 |
lineage2.2.1 | 15 |
lineage3;lineage4 | 1 |
lineage2.2.2 | 3 |
lineage3 | 6 |
lineage4.8.1 | 3 |
lineage4.4.1.1.1 | 4 |
lineage4.1.2.1;lineage4.4.1 | 1 |
lineage4.1.2.1 | 3 |
lineage2;lineage4.9 | 1 |
lineage4.1.1.1 | 3 |
lineage2.2;lineage4.9 | 1 |
lineage4.5 | 1 |
La2 | 1 |
lineage4.2.1 | 3 |
lineage4 | 1 |
lineage4.1.2.1;lineage4.9 | 1 |
lineage2.2.1;lineage4.9 | 2 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4.3.3;lineage4.8 | 2 |
lineage5.1.1 | 1 |
lineage4.2.2.2 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage4.1.2 | 3 |
lineage4.4.1.1 | 2 |
lineage4.1.1.3 | 2 |
lineage4.1.2.1;lineage4.4.1.1 | 1 |
La1.6 | 1 |
spoligotype | Count |
---|---|
None | 140 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
ERR4818583 | Other | lineage4.3.3 | None |
ERR4796351 | Sensitive | lineage4.9 | None |
ERR4769436 | Other | La1.3 | None |
ERR171142 | Other | lineage3.1.1;lineage4.9 | None |
SRR1183054 | Sensitive | lineage4.9 | None |
ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None |
ERR4798139 | RR-TB | lineage1.1.2 | None |
ERR3445487 | Other | La1.7.X-unk4 | None |
SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None |
SRR9971065 | RR-TB | lineage2.2.1 | None |
SRR1173740 | Other | lineage3;lineage4 | None |
SRR1175512 | Sensitive | lineage4.9 | None |
ERR9992879 | XDR-TB | lineage4.3.3 | None |
SRR9971168 | Other | lineage4.3.2.1 | None |
ERR9992784 | XDR-TB | lineage2.2.2 | None |
ERR5917985 | MDR-TB | lineage2.2.1 | None |
SRR1173281 | Other | lineage3 | None |
SRR1180355 | Sensitive | lineage4.9 | None |
SRR1181256 | Other | lineage4.9 | None |
SRR11342693 | MDR-TB | lineage4.8.1 | None |
SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None |
ERR867570 | RR-TB | lineage4.9 | None |
SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None |
SRR1140736 | Other | lineage4.1.2.1 | None |
SRR1175513 | Sensitive | lineage4.9 | None |
SRR1180410 | Sensitive | lineage4.9 | None |
SRR1181325 | Sensitive | lineage4.9 | None |
SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1180406 | Sensitive | lineage4.9 | None |
ERR978765 | RR-TB | lineage4.8 | None |
SRR11342649 | MDR-TB | lineage4.3.3 | None |
SRR1180440 | Other | lineage4.9 | None |
ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
SRR1180444 | Sensitive | lineage4.9 | None |
SRR6046839 | Other | lineage4.9 | None |
SRR1735596 | RR-TB | lineage4.9 | None |
SRR1180946 | Sensitive | lineage2;lineage4.9 | None |
ERR5162090 | RR-TB | lineage4.9 | None |
SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4821172 | RR-TB | lineage4.9 | None |
SRR11342642 | MDR-TB | lineage4.1.1.1 | None |
SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1049672 | Other | lineage3 | None |
ERR4815550 | Other | lineage2.2;lineage4.9 | None |
ERR108125 | RR-TB | lineage4.9 | None |
ERR2229198 | Sensitive | lineage4.8 | None |
ERR4816548 | HR-TB | lineage4.5 | None |
SRR1181283 | Sensitive | lineage4.9 | None |
SRR13888750 | Other | La2 | None |
ERR867541 | MDR-TB | lineage4.2.1 | None |
SRR1180319 | Sensitive | lineage4.9 | None |
ERR4821272 | RR-TB | lineage4.1.2.1 | None |
SRR1180977 | Sensitive | lineage4.9 | None |
SRR1181349 | Sensitive | lineage4 | None |
ERR978767 | RR-TB | lineage4.8 | None |
ERR4769493 | Other | lineage4.9 | None |
ERR978766 | RR-TB | lineage4.8 | None |
SRR1180446 | Other | lineage4.9 | None |
SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None |
SRR11342634 | MDR-TB | lineage4.8 | None |
SRR8758877 | MDR-TB | lineage4.1.1.1 | None |
SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None |
SRR1180413 | Sensitive | lineage4.9 | None |
SRR9971112 | Other | lineage2.2.1 | None |
SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None |
SRR1062918 | Other | lineage3 | None |
ERR2027233 | Sensitive | lineage4.1.2.1 | None |
SRR11342664 | MDR-TB | lineage2.2.2 | None |
SRR1181402 | Sensitive | lineage4.9 | None |
SRR1173770 | Other | lineage4.9 | None |
ERR4769530 | RR-TB | lineage4.9 | None |
SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None |
ERR323044 | HR-TB | lineage4.3.4.2.1 | None |
ERR10762275 | MDR-TB | lineage4.2.1 | None |
SRR1140716 | Other | lineage3 | None |
SRR11342662 | MDR-TB | lineage4.8.1 | None |
SRR1180250 | Other | lineage4.9 | None |
ERR4808964 | RR-TB | lineage2.2.1 | None |
SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None |
ERR867524 | Pre-XDR-TB | lineage4.2.1 | None |
SRR1180300 | Sensitive | lineage4.9 | None |
SRR1180375 | Sensitive | lineage4.9 | None |
SRR1180391 | Sensitive | lineage4.9 | None |
ERR751345 | Other | lineage5.1.1 | None |
SRR1172717 | Sensitive | lineage4.9 | None |
SAMEA3501073 | RR-TB | lineage4.8 | None |
ERR4829208 | Other | lineage4.8 | None |
SRR11342687 | RR-TB | lineage4.2.2.2 | None |
SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None |
SRR1184021 | Sensitive | lineage4.9 | None |
SRR11342682 | Other | lineage4.1.2 | None |
ERR867567 | RR-TB | lineage3 | None |
SRR1175487 | Sensitive | lineage4.9 | None |
SRR11342651 | MDR-TB | lineage4.1.1.1 | None |
SRR1180148 | Sensitive | lineage4.9 | None |
SRR1180420 | Sensitive | lineage4.9 | None |
SRR11972417 | MDR-TB | lineage2.2.1 | None |
SRR29050859 | Other | lineage4.9 | None |
SRR11342660 | MDR-TB | lineage2.2.1 | None |
ERR867523 | Pre-XDR-TB | lineage2.2.1 | None |
ERR2446154 | Sensitive | lineage4.4.1.1 | nl |
SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
ERR3275615 | Sensitive | lineage4.4.1.1 | nl |
SRR1180399 | Sensitive | lineage4.9 | None |
SRR9971113 | Other | lineage2.2.1 | None |
SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
ERR3797065 | RR-TB | lineage4.9 | None |
ERR4819383 | RR-TB | lineage4.9 | None |
SRR1181351 | Sensitive | lineage4.9 | None |
SRR1062871 | RR-TB | lineage4.3.4.2.1 | None |
SRR1735598 | RR-TB | lineage4.9 | None |
SRR9971046 | MDR-TB | lineage4.8 | None |
SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1180312 | Sensitive | lineage4.9 | None |
SRR16156804 | Sensitive | lineage4.9 | None |
SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None |
SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None |
SRR1175506 | Sensitive | lineage4.9 | None |
SRR18002874 | MDR-TB | lineage2.2.1 | None |
ERR3283046 | Sensitive | lineage4.9 | None |
SRR9971114 | Other | lineage2.2.1 | None |
SRR10993951 | RR-TB | La1.6 | None |
SRR1181403 | Other | lineage4.9 | None |
ERR4769417 | Pre-XDR-TB | lineage4.9 | None |
SRR11342658 | RR-TB | lineage4.1.2 | None |
SRR1049673 | Pre-XDR-TB | lineage3 | None |
SRR1180345 | Other | lineage4.9 | None |
SRR1181215 | Sensitive | lineage4.4.1.1.1 | None |
SRR1172807 | Sensitive | lineage4.9 | None |
SRR9970980 | HR-TB | lineage4.1.2 | None |
SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None |
SRR9971150 | RR-TB | lineage4.8.1 | None |
ERR4769508 | RR-TB | lineage4.9 | None |
ERR4769433 | RR-TB | lineage4.9 | None |
ERR970449 | RR-TB | lineage4.1.1.3 | None |
SRR10315567 | HR-TB | lineage2.2.1 | None |
SRR16157123 | Other | lineage4.9 | None |