Rv0668 - c.1368G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
38 Sensitive
27 RR-TB
3 HR-TB
23 MDR-TB
10 Pre-XDR-TB
2 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 52 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.3;lineage4.8 | 2 |
| lineage2.2.1 | 15 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 4 |
| lineage3 | 6 |
| lineage4.2.1 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4.8 | 9 |
| lineage4.2.2.2 | 1 |
| lineage4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2 | 3 |
| lineage4.1.1.1 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8.1 | 3 |
| lineage2.2.2 | 3 |
| lineage4.3.3 | 3 |
| La1.3 | 1 |
| lineage4.5 | 1 |
| lineage5.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3.1.1;lineage4.9 | 1 |
| La2 | 1 |
| La1.6 | 1 |
| lineage3;lineage4 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 137 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR16157123 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Other | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1180444 | Sensitive | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR751345 | Other | lineage5.1.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173281 | Other | lineage3 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | SRR29050859 | Other | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR4829208 | Other | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None |
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