EBG00000313339 - n.730C>T
Drug resistance types
149 Sensitive
88 RR-TB
80 HR-TB
79 MDR-TB
58 Pre-XDR-TB
0 XDR-TB
295 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2.1 | 5 |
| lineage2.2.1 | 91 |
| lineage4.8 | 33 |
| lineage4.7 | 6 |
| lineage4.3.3 | 16 |
| lineage4.2.1 | 6 |
| lineage4.4.2 | 5 |
| lineage4.1.2.1 | 42 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 9 |
| lineage2.2.2 | 16 |
| lineage4.9 | 166 |
| lineage4.4.1.2 | 2 |
| lineage4.3.4.2 | 3 |
| lineage4.9.1 | 1 |
| lineage4 | 79 |
| 38 | |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.1.2 | 5 |
| lineage4.3.4.1 | 3 |
| lineage4.3.2 | 3 |
| La1.7.X-unk4 | 1 |
| lineage4.6.1.1 | 3 |
| La1 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.3.4 | 1 |
| La1.8.1 | 10 |
| lineage6 | 4 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 7 |
| La1.2 | 3 |
| lineage4.9;La1.3 | 2 |
| lineage4.2.2.2 | 1 |
| lineage2.2 | 6 |
| lineage3.1.2.1 | 4 |
| lineage2.2.1.2 | 1 |
| lineage4.1.1.3 | 7 |
| lineage4.5 | 6 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage5.1.1 | 2 |
| lineage1.1.1.1 | 1 |
| lineage3.1.1 | 6 |
| lineage3 | 34 |
| lineage4.6.2.2 | 5 |
| lineage4.4.1.1 | 9 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1.1 | 2 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| La2 | 1 |
| lineage4.2.2.1 | 2 |
| lineage4.4 | 1 |
| La1.4 | 1 |
| lineage2.2.1.1 | 7 |
| lineage4.2.2 | 3 |
| La1.7.1 | 2 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage1.1.1 | 2 |
| lineage4.1 | 5 |
| lineage1.1.2 | 6 |
| lineage4.1.3 | 3 |
| lineage3.1 | 3 |
| lineage1.1.3.1 | 4 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.1.1 | 3 |
| lineage4.6.5 | 2 |
| lineage5 | 2 |
| lineage3.1.3 | 2 |
| lineage4.2 | 1 |
| lineage1.2.1.1 | 2 |
| lineage4;lineage2 | 1 |
| lineage1 | 2 |
| lineage5.1.3 | 1 |
| lineage4.1.1.3.1 | 5 |
| lineage4.8.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage3.1.2.2 | 2 |
| lineage3.1.2 | 2 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.1.1 | 5 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.8;lineage3 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
| lineage4.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 749 |
Geographic prevalence
Country level data for this variant is available for 45 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | DRR184629 | Other | lineage2.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796581 | HR-TB | lineage4.1.2 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796612 | HR-TB | lineage4.3.2 | None | ERR10796597 | Other | lineage4 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR10796635 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283010 | Other | La1 | None | ERR3283021 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3445504 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797068 | Other | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR3806588 | Other | lineage6 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769482 | Sensitive | La1 | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769555 | Other | La1.3 | None | ERR4797157 | MDR-TB | lineage4.2.2.2 | in | ERR4799513 | HR-TB | lineage2.2 | None | ERR4798431 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4800197 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4800297 | Other | lineage4.1.1.3 | in | ERR6359069 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6197040 | Other | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359070 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR736837 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117788 | Other | lineage3 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787336 | Other | lineage6 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1013559 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1013560 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR1048858 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048859 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15296954 | Other | La1.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR14088382 | MDR-TB | lineage3 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR19226954 | Sensitive | lineage4.1.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18913779 | Other | lineage3 | None | SRR2075823 | Pre-XDR-TB | lineage2.2.2 | None | SRR19304094 | Other | lineage6 | None | SRR19304104 | Other | lineage4.8 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR2075818 | Pre-XDR-TB | lineage2.2.2 | None | SRR2075820 | Pre-XDR-TB | lineage2.2.2 | None | SRR2075817 | Pre-XDR-TB | lineage2.2.2 | None | SRR2075822 | Pre-XDR-TB | lineage2.2.2 | None | SRR21469200 | Other | La1.7.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815118 | Other | lineage2.2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675455 | Sensitive | lineage4 | None | ERR4815313 | Sensitive | lineage3 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815255 | Other | lineage4.4.2 | None | ERR4815261 | Other | lineage4.8 | gb | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | ERR4815419 | Other | lineage4.8 | None | ERR4815784 | Other | lineage2.2.1 | gb | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815427 | HR-TB | lineage3.1 | gb | SRR3675209 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814623 | Other | lineage4.8 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4814709 | Other | lineage4.1.1 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675229 | Other | lineage4 | None | ERR4815467 | Other | lineage3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675247 | Other | lineage4.9 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR1750920 | Sensitive | lineage4.4.1.1 | za | ERR4814763 | Other | lineage2.2.1 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR4814821 | Other | lineage2.2.1 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4814986 | Other | lineage4.3.4.2 | None | SRR3675509 | Other | lineage4.9 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675279 | Other | None | ERR4814905 | Other | lineage4.8 | gb | SRR3675282 | Other | None | ERR4814911 | Other | lineage4.3.3 | None | SRR3675318 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675387 | Sensitive | None | ERR4815572 | Other | lineage4.1.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR4816043 | Other | lineage4.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4817060 | RR-TB | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816334 | Other | lineage4.6.2.2 | None | ERR4817069 | RR-TB | None | ERR4816466 | HR-TB | None | ERR4816531 | Other | lineage4.1.2 | None | SAMN02360559 | Pre-XDR-TB | lineage2.2.2 | kr | ERR216965 | HR-TB | lineage4.9 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR2229249 | Sensitive | lineage4.8 | dk | ERR4816571 | Other | lineage1.1.2 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4817175 | Other | lineage4.8 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR2229760 | Other | lineage4.8 | dk | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816777 | Sensitive | lineage3 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816907 | Other | lineage1.1.1 | None | ERR4817506 | Sensitive | lineage3 | gb | ERR4815815 | Sensitive | lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818670 | Other | La1.8.1 | gb | ERR4817735 | Other | lineage4.8 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4818988 | Other | lineage1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817863 | Other | La1.8.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2513401 | HR-TB | lineage3 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR2512532 | Other | lineage5.1.3 | gb | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2512494 | Other | lineage4.3.3 | gb | ERR4818208 | Other | lineage4.1.1.3.1 | gb | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818431 | Other | lineage1.1.2 | gb | ERR4819051 | Other | lineage4 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818536 | Other | lineage4.9 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818945 | Other | lineage4.1.3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818574 | Other | lineage6 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818958 | Other | lineage4.1.1 | gb | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2513657 | Other | lineage1.2.2.2 | gb | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4820324 | Other | lineage4 | None | ERR2514173 | Other | lineage4.5 | gb | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819462 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819576 | Other | lineage4.2.2 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820766 | Other | lineage4.8 | gb | SRR5341456 | Other | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819166 | Other | lineage3 | gb | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4820250 | HR-TB | lineage1.2.1.2.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | SRR5341396 | Other | lineage4 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR2513976 | Other | lineage4.8 | gb | ERR4819324 | Other | lineage4.8 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4819361 | Sensitive | lineage3.1.2 | gb | ERR4820318 | Other | lineage4.2.2 | None | ERR4819368 | Sensitive | lineage4.8 | gb | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819555 | Other | lineage4.8 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4820484 | Other | lineage4.8 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4819830 | Other | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819868 | MDR-TB | lineage4.2.2.1 | gb | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4820545 | Sensitive | lineage4.9 | None | ERR1023509 | Other | None | ERR4819933 | Other | lineage4.9 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR2514943 | Other | lineage4.8 | gb | ERR2514968 | Other | lineage4.3.3 | None | ERR4820586 | Other | lineage3 | gb | ERR4819980 | Other | lineage4.1.2.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820833 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820107 | RR-TB | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2515230 | Sensitive | lineage4.8 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821053 | Other | lineage3 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR2517475 | Other | lineage4 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR6045496 | Other | lineage6.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045503 | HR-TB | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045543 | Sensitive | lineage4.3.1.1 | gb | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821899 | Other | lineage4.1 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821286 | Other | lineage4.8 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821310 | Other | lineage5 | None | ERR4821409 | Other | lineage4.8 | None | ERR4822105 | Other | lineage4.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6046210 | Other | lineage4 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045705 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045778 | Other | lineage3.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044817 | Other | lineage3 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045899 | Other | lineage4.1.2.1 | gb | SRR6044841 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046044 | Sensitive | lineage4.3.1.1 | gb | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6046275 | Other | lineage3.1.1 | None | SRR6046281 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046359 | Other | lineage4.7 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR4830778 | Pre-XDR-TB | lineage4.5 | None | SRR6046442 | Other | lineage3 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046482 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046897 | Sensitive | lineage4 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR4831745 | MDR-TB | lineage2.2.1.1 | None | ERR4831777 | MDR-TB | lineage2.2.1.1 | vn | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6896545 | Other | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR4831851 | HR-TB | lineage2.2.1 | vn | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR502943 | HR-TB | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131098 | MDR-TB | lineage4.3.3 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7585435 | Other | lineage4.9 | None |
|---|
