EBG00000313339 - n.2971T>G
Drug resistance types
6 Sensitive
22 RR-TB
4 HR-TB
24 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
43 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2.1 | 6 |
| lineage4.4.1.1.1 | 2 |
| La1.8.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.9 | 22 |
| lineage4.1.1.1 | 5 |
| lineage1.1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1 | 12 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.1.2 | 2 |
| lineage4.8.1 | 3 |
| lineage4.2.1 | 2 |
| lineage4.8 | 2 |
| lineage4.3.3 | 6 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.4.1.1 | 3 |
| lineage4.1.1.3 | 5 |
| lineage1.2.2 | 2 |
| 1 | |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage3.1.1 | 1 |
| La1.6 | 1 |
| lineage4.2.2.2 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| lineage5.1.1 | 1 |
| lineage3 | 4 |
| lineage4.3.4.1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1184329 | Other | lineage4.9 | None | ERR4814709 | Other | lineage4.1.1.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1173185 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR1183517 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR4818988 | Other | lineage1.2.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4817060 | Other | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | ERR867574 | Other | lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4821796 | Other | lineage4.1.1.1 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | ERR4816464 | Other | lineage3 | None | SRR11342646 | HR-TB | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1173281 | Other | lineage3 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821263 | Other | lineage4.1.3 | gb | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1181191 | Other | lineage4.9 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR867575 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819622 | Other | lineage4.1.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None |
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