EBG00000313325 - n.829T>G
Drug resistance types
3 Sensitive
18 RR-TB
9 HR-TB
21 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
97 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.1 | 3 |
| lineage4.3.3 | 5 |
| lineage4.1.2.1 | 13 |
| La1.8.1 | 3 |
| lineage4.8 | 11 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1 | 28 |
| lineage4.7 | 4 |
| lineage4.2.1 | 3 |
| lineage4.9 | 21 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4 | 9 |
| lineage4.4.1.2 | 2 |
| lineage3 | 12 |
| lineage4.3.2 | 3 |
| lineage3.1.1 | 4 |
| lineage4.4.2 | 3 |
| lineage4.3.2.1 | 1 |
| La2 | 1 |
| lineage4.4 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.4.1.1 | 2 |
| 2 | |
| lineage1.2.1.2 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.3.3;lineage3 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1 | 2 |
| lineage3.1.2.1 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage1.1.3 | 1 |
| lineage3.1.3 | 2 |
| lineage1.1.3.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 162 |
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR10796556 | Other | lineage4.3.4.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR10796569 | Other | lineage4.9 | None | ERR10796629 | Other | lineage4 | None | ERR10796588 | Other | lineage4 | None | ERR10796615 | Other | lineage4 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796592 | Other | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR3468602 | Other | La1.8.1 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR5979407 | Other | lineage3 | None | ERR4195871 | Sensitive | lineage4.3.2 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR10380127 | Other | lineage4.3.3 | None | ERR9117759 | Other | lineage3 | None | ERR9121512 | Sensitive | lineage4.3.2 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18002892 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003040 | MDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003044 | MDR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR19304104 | Other | lineage4.8 | None | SRR19304083 | Other | lineage4.4.1.1 | None | ERR10610313 | HR-TB | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815698 | RR-TB | lineage4.7 | None | ERR9806750 | HR-TB | None | SRR3675219 | Other | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4814824 | Other | lineage3 | None | SRR3675265 | Other | lineage4 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814730 | Other | lineage4.8 | gb | ERR4814939 | Other | lineage4.3.3;lineage3 | gb | ERR4815849 | Other | lineage3.1.1 | None | ERR4816988 | Other | lineage3 | gb | SRR3675513 | Other | lineage4.8 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4817342 | Other | lineage4.1.1 | None | ERR4816562 | Other | lineage4 | None | ERR4816182 | Other | lineage3.1.2.1 | gb | ERR4816231 | Other | lineage4 | None | ERR4816437 | Other | lineage3 | gb | ERR4817488 | Other | lineage4.3.4.2.1 | None | ERR4816464 | Other | lineage3 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR2510759 | Other | lineage4.8 | it | ERR2513413 | Other | lineage3.1.2.1 | None | ERR2510768 | Other | lineage4.8 | it | ERR2510794 | Other | lineage4.3.4.2 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR2510796 | HR-TB | lineage4.3.4.2 | it | ERR4818810 | Other | lineage2.2.1 | None | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818351 | Other | lineage1.1.3 | None | ERR4819080 | Other | lineage4.1.2.1 | gb | ERR4819017 | RR-TB | lineage3 | None | ERR4819176 | Other | lineage3.1.1 | gb | ERR2513589 | Other | lineage3.1.3 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR4819196 | Other | lineage4.1.1 | gb | ERR4819229 | Sensitive | lineage4.1.2.1 | gb | ERR4819766 | Other | lineage4.4.1.1 | None | ERR4820275 | HR-TB | lineage4.4.1.2 | gb | ERR4819720 | Other | lineage3.1.2.1 | gb | ERR4819734 | RR-TB | lineage3 | gb | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820484 | Other | lineage4.8 | None | ERR4820572 | Other | lineage1.2.1.2.1 | None | ERR4819770 | Other | lineage4.8 | gb | ERR4819899 | Other | lineage3.1.2.1 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4820586 | Other | lineage3 | gb | ERR4820684 | Other | lineage3 | gb | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821331 | HR-TB | lineage4.8 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4821220 | Other | lineage3 | None | ERR4821731 | Other | lineage3 | gb | SRR5818422 | Other | lineage4.9 | None | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818393 | Other | lineage4.9 | None | SRR5818409 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR5818440 | Other | lineage4.9 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR5818457 | Other | lineage4.9 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR6045997 | Other | lineage3.1.3 | gb | ERR2851354 | RR-TB | lineage4.9 | None | ERR4829289 | Other | lineage4.1.2.1 | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046646 | Other | lineage4.7 | gb | SRR6982141 | RR-TB | lineage4.3.3 | None |
|---|
