Rv0668 - c.1347G>C
Drug resistance types
127 Sensitive
48 RR-TB
115 HR-TB
116 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
155 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 229 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| La1.8.1 | 8 |
| lineage4.8 | 14 |
| lineage2.2.1 | 41 |
| M.canetti;lineage2.1;lineage4.9 | 21 |
| lineage4.1.1.3 | 6 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.1.2.1 | 12 |
| lineage4.5 | 3 |
| lineage1;lineage4.9 | 2 |
| lineage1.2.2.2 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| lineage4.3.3 | 8 |
| La1.7;lineage4.9 | 10 |
| La1.3 | 4 |
| lineage2.2.2 | 6 |
| lineage2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 4 |
| lineage1.1.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage4.6.1.2 | 4 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4 | 8 |
| lineage4.3.4.2.1 | 8 |
| lineage3 | 17 |
| lineage4.8;lineage4.9 | 2 |
| lineage1.1.1;lineage4 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage4.3.2.1 | 4 |
| M.canetti;lineage2.1;lineage3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.2 | 4 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| 4 | |
| lineage4.6.2.2 | 3 |
| lineage4.6.1.1 | 3 |
| La1.6 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage6.1.3 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage4.4 | 1 |
| lineage1.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.4.1.1.1 | 3 |
| La3;lineage4.9 | 8 |
| lineage4.1.2.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.4.1.1 | 3 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage4.2.1 | 6 |
| La1.7 | 2 |
| lineage4.1.1.3;lineage4.9 | 3 |
| lineage2.2.1.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage3.1.1 | 2 |
| lineage2.2.1.2 | 3 |
| M.canetti;lineage4.9 | 3 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1 | 1 |
| La1.4 | 1 |
| lineage2.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| La1.7.1 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage5.1.4 | 1 |
| lineage4.7 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;M.canetti;lineage4.9 | 2 |
| La1.2.BCG | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| M.canetti;lineage2.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| M.canetti | 1 |
| lineage2.2.1;lineage4 | 2 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage5.1.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| La1.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.1;lineage4.3.2 | 1 |
| lineage4.4.1.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage3;lineage4.9 | 1 |
| La3;lineage4 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3.1.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La2;M.canetti | 1 |
| lineage1.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| lineage4.9.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 579 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341345 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3797023 | MDR-TB | La1.8.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR7236177 | Other | La1.8.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR6046210 | Other | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4769436 | Other | La1.3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR6044815 | RR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303779 | Sensitive | lineage4.8 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR3675494 | RR-TB | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1013527 | Other | lineage2.2.1 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR3675243 | MDR-TB | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR18289200 | Other | lineage4.9 | None | SRR7535086 | Other | None | SRR28044634 | Other | lineage3 | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786597 | Other | lineage4.6.2.2 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR10993951 | RR-TB | La1.6 | None | ERR176651 | Other | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816762 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1181349 | Sensitive | lineage4 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR926160 | Other | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR3675318 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR1141261 | Sensitive | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR3468544 | RR-TB | lineage2.1;lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | SRR6131515 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR473332 | Other | lineage4.9 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR3675547 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR2432997 | Other | lineage4.8 | None | SRR10808730 | Other | lineage4.9 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR5341467 | Other | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR3468607 | RR-TB | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR1062864 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR3675323 | Sensitive | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR17567930 | Sensitive | lineage4.4.1.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR22251329 | Other | lineage2.1 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR4819241 | Other | lineage4.9 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | SRR3675383 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR1063896 | HR-TB | None | ERR234659 | HR-TB | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR12708416 | Sensitive | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR400529 | Other | lineage3 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR2693229 | RR-TB | La3;M.canetti;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1175127 | Other | lineage2.2.1.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR3675507 | RR-TB | lineage4.9 | None | SRR069978 | HR-TB | lineage2.2.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180440 | Other | lineage4.9 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR5341298 | Other | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR4769408 | Other | La1.3 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR7645927 | Other | lineage4.8 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675284 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR266120 | Other | M.canetti | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR400345 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR3797019 | Other | La1.8.1 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR7645928 | Other | lineage4.7 | None | SRR3675582 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR400326 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR069989 | HR-TB | lineage2.2.2 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR1140716 | Other | lineage3 | None | SRR6046376 | Other | lineage3 | None | SRR1180250 | Other | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4769552 | Sensitive | La1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR926164 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1062865 | Sensitive | lineage2.2.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR772255 | MDR-TB | lineage2.1;lineage4.3.2 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR1158918 | Other | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR21732954 | Sensitive | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | SRR3675508 | MDR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR6045795 | Other | lineage2.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | SRR3675482 | RR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR3797060 | Other | La1.8.1 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR736848 | Other | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR266126 | Other | La2;M.canetti | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4821053 | RR-TB | lineage3 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR5311098 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR3675487 | MDR-TB | M.canetti;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR3675312 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR4769493 | Other | lineage4.9 | None | SRR13423649 | Other | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR369151 | Other | lineage4.9 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1159378 | Other | lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR245758 | Other | lineage4.9.1 | None | ERR038289 | Other | lineage4.3.3 | None | SRR5535933 | Other | lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR926157 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR1791696 | RR-TB | La1.8.1 | None | SRR3675269 | RR-TB | lineage4.9 | None |
|---|
