EBG00000313325 - n.470T>G


Drug resistance types
110 Sensitive 39 RR-TB 107 HR-TB 24 MDR-TB 21 Pre-XDR-TB 1 XDR-TB 126 Other
lineage Counts
lineage Count
84
lineage4.4.2 3
lineage2.2.1 44
lineage4.3.3 4
lineage4.1.1.3 5
lineage4.8 15
lineage4.1.2.1 12
lineage4.1.2 2
lineage4.3.2.1 3
lineage4.8.1 1
lineage4 52
lineage1.1.1.1 1
lineage2.2.2 4
lineage4.7 1
lineage4.9 115
lineage6.2.3;lineage1.1.2 1
La1.8.1 7
lineage3.1.2 1
La1.3 8
lineage4.9;La1.3 2
lineage3.1.1 3
La1.2 2
lineage1.1.3.3 1
lineage2.2.1.2 1
lineage2.2 7
lineage3.1.2.1 1
lineage4.5 2
lineage3 10
lineage4.3.2 1
lineage4.3.4 2
lineage1.1.3.1 1
lineage4.6.5 2
lineage6.1.3 1
lineage6 2
lineage4.3.4.2 1
lineage4.4.1.1.1 2
lineage4.9;lineage2.2 1
lineage2 1
La2 1
lineage4.2.1 3
La1.7.1 2
lineage2.2.1.1 1
lineage7;lineage2.2.1.2 1
lineage3.1.3 1
lineage1.1.1 1
lineage4.1 2
lineage4;lineage2.2 1
lineage4.4.1 1
lineage2.1 1
lineage4.1.1 2
lineage4.3 1
lineage1.1.2 1
lineage1.2.1.2.1 1
lineage4.1.1.3.1;lineage3.1.2 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 428
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6511621 HR-TB None
DRR188519 Other lineage4.4.2 None
ERR4831117 HR-TB None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6982141 RR-TB lineage4.3.3 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6855695 Sensitive lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323045 HR-TB None
ERR323053 HR-TB None
ERR323108 HR-TB lineage4 None
DRR185000 Other lineage1.1.1.1 None
DRR185024 Other lineage2.2.2 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831638 Sensitive None
SRR6982246 Sensitive lineage4 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR7496471 Sensitive None
SRR7496523 Other lineage4.7 None
SRR9970980 Other lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR9971168 Other lineage4.3.2.1 None
DRR184629 Other lineage2.2.1 None
DRR184982 RR-TB lineage2.2.1 None
ERR1063859 HR-TB None
ERR1034634 HR-TB None
ERR1023502 MDR-TB lineage2.2.1 None
ERR1023525 HR-TB lineage4 None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR3283006 RR-TB lineage4.9 None
ERR10796571 Other lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR10796597 Other lineage4 None
ERR3283021 HR-TB None
ERR3283014 HR-TB None
ERR3324368 RR-TB lineage6.2.3;lineage1.1.2 None
ERR3283025 HR-TB None
ERR3283032 HR-TB None
ERR3283040 HR-TB None
ERR3283055 HR-TB None
ERR3283028 Other None
ERR3283033 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 HR-TB None
ERR3283046 MDR-TB lineage4.9 None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3468488 RR-TB La1.8.1 None
ERR3439265 Other lineage4.9 None
ERR3445504 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3445501 HR-TB None
ERR387051 HR-TB None
ERR3797015 HR-TB None
ERR3797019 Other La1.8.1 None
ERR3797043 HR-TB None
ERR3797046 HR-TB None
ERR3797036 HR-TB None
ERR3797062 RR-TB lineage4.9 None
ERR3797067 Other La1.8.1 None
ERR3797065 MDR-TB lineage4 None
ERR3797068 Other La1.8.1 None
ERR3797080 HR-TB lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797081 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR3797087 Sensitive lineage4 None
ERR3797047 HR-TB lineage4 None
ERR3797048 HR-TB None
ERR3797063 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4024991 Other None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR4188247 HR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4769457 Other lineage4.9 None
ERR4769514 Other La1.3 None
ERR4769551 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769552 Other La1.3 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4769408 Other La1.3 None
ERR4769427 Other La1.2 None
ERR4769436 Other La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4769444 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4769497 HR-TB La1.2 None
ERR4769506 Sensitive La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR4769547 Sensitive lineage4.9;La1.3 None
ERR4769554 RR-TB lineage4.9 None
ERR4769555 Other La1.3 None
ERR4796929 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4798099 Other None
ERR4798431 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4798769 Other lineage1.1.3.3 None
ERR4798823 HR-TB lineage4 None
ERR4799378 Sensitive lineage4 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR4811493 HR-TB None
ERR4811030 Sensitive None
ERR4811101 Other lineage4.4.2 None
ERR4812155 Sensitive None
ERR6358979 Other None
ERR5979454 Pre-XDR-TB lineage3 None
ERR6358951 HR-TB lineage4 None
ERR6865502 Sensitive lineage4 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR6866241 Other lineage4.3.2 None
ERR6865513 Other lineage4.1.2.1 None
ERR6866022 Other None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866547 Sensitive lineage4 None
ERR6866410 Sensitive None
ERR736865 HR-TB None
ERR6866639 Other None
ERR736848 HR-TB None
ERR736817 HR-TB lineage4.3.4 None
ERR736856 HR-TB lineage4 None
ERR736875 HR-TB lineage4 None
ERR752229 Other lineage4.5 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR7801175 RR-TB lineage4.6.5 None
ERR7801176 RR-TB lineage4.6.5 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
ERR9119669 HR-TB None
ERR9285979 RR-TB lineage3.1.1 None
ERR9786164 RR-TB lineage4.1.1.3 None
ERR9787256 Other lineage6.1.3 None
ERR9787336 Other lineage6 None
ERR9787362 Sensitive lineage6 None
ERR9786076 Sensitive lineage3 None
ERR9786592 Sensitive lineage4.3.4.2 None
ERR9786639 Sensitive lineage4.8 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR10809074 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR11349135 XDR-TB lineage4.3.3 None
SRR11462861 Other La1.8.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1172807 Sensitive lineage4.9 None
SRR1172310 HR-TB None
SRR1172717 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1174897 HR-TB None
SRR1175512 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175507 MDR-TB lineage4 None
SRR1175513 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR11972327 Pre-XDR-TB lineage2.2.1 None
SRR1181214 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1196478 MDR-TB lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR13180204 Sensitive lineage3 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR14801749 Sensitive None
SRR14782405 HR-TB None
SRR14782539 MDR-TB lineage4.2.1 None
SRR17832802 HR-TB lineage3 None
SRR16156188 HR-TB lineage4.9 None
SRR16156697 MDR-TB lineage2.2.1 None
SRR16156832 RR-TB None
SRR16157123 Other lineage4.9 None
SRR1791747 Other La1.8.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR20969731 Other lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR20969542 Other lineage4.4.2 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18913742 Sensitive lineage3.1.3 None
SRR19295647 Sensitive lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR21469201 Other La1.7.1 None
SRR21240161 Sensitive lineage4.1.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR8692868 Sensitive lineage4.9 None
SRR22424765 MDR-TB lineage4 None
SRR12708416 Sensitive lineage4.1 None
SRR22424787 Sensitive lineage4.9 None
SRR22424851 MDR-TB lineage4.3.3 None
SRR8692881 Other lineage4.9 None
SRR26159065 Other lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692897 Other lineage4.9 None
SRR8692824 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692878 Other lineage4.9 None
SRR8692791 Other lineage4.9 None
SRR8692887 Other None
SRR26159063 Sensitive lineage4.9 None
SRR3675284 HR-TB lineage4.9 None
ERR161039 Sensitive lineage4.3.4 None
SRR3601585 Pre-XDR-TB lineage2.2 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR181744 HR-TB None
SRR3675209 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
SRR3675280 HR-TB lineage4.9 None
SAMEA3501065 RR-TB lineage4.8 None
SRR3675455 Sensitive lineage4 None
ERR176778 HR-TB None
ERR176779 HR-TB None
SRR3675477 Other lineage4.9 None
ERR4814690 Sensitive lineage2.2.1 None
ERR4815471 Other lineage4.9 None
ERR1750938 Other lineage4.4.1 None
SRR3675246 Sensitive lineage4 None
ERR181824 HR-TB lineage4 None
SRR3675292 Sensitive lineage4 None
ERR176651 HR-TB None
SRR3675312 HR-TB lineage4 None
SRR3675456 HR-TB None
ERR181887 HR-TB None
ERR4815556 RR-TB lineage3 None
ERR176740 HR-TB None
SRR5341422 HR-TB lineage2.1 None
ERR4816964 Other lineage4.9 None
SAMEA3501015 Other lineage4.8 None
SRR3675514 Sensitive lineage4.9 None
SRR3675522 Other None
SRR3675537 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675555 HR-TB None
ERR212125 HR-TB lineage4 None
ERR212123 Other None
ERR4817069 RR-TB None
ERR2228900 RR-TB lineage4.8 None
ERR4816470 Other lineage3 None
SRR3675571 HR-TB None
ERR4816755 Other lineage4.1.1.3 None
SRR5818426 Other None
ERR216965 HR-TB lineage4.9 None
ERR4816656 HR-TB None
ERR4817667 HR-TB lineage4.8 None
ERR4818710 Sensitive lineage4.9 None
ERR2513382 RR-TB lineage4.1.1.3 None
SRR5341432 HR-TB lineage4 None
SAMEA3450033 Other lineage4.8 None
SAMEA3501063 RR-TB lineage4.8 None
ERR3275941 RR-TB lineage4.3 nl
ERR4818333 Sensitive lineage1.1.2 None
ERR2513259 Other lineage3 None
ERR4818536 Other lineage4.9 None
ERR4818561 HR-TB lineage4 None
ERR4818583 Other lineage4.3.3 None
ERR4819357 Other lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4819462 Other lineage4 None
ERR4819546 HR-TB lineage3 None
ERR2510804 Other lineage2.2.1 None
ERR2512423 Other lineage4.1.1.3 None
ERR2446566 Other lineage4.1 None
ERR4818110 Sensitive lineage4.9 None
ERR4818977 RR-TB lineage4.1.2.1 None
SRR5341373 HR-TB lineage4 None
SAMEA3501067 RR-TB lineage4.8 None
SRR5341400 HR-TB lineage4 None
SRR6045480 Other lineage4.1.1 None
SRR5341456 Other None
SRR5341293 HR-TB lineage4 None
ERR4819863 RR-TB lineage4.9 None
ERR1023509 Other None
ERR4819933 Other lineage4.9 None
SRR5341313 HR-TB None
SAMEA3501070 RR-TB lineage4.8 None
SRR5341315 Sensitive None
ERR6359082 Other lineage4.9 None
SRR5341330 HR-TB None
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2515230 Sensitive lineage4.8 None
ERR4820193 Other lineage3 None
ERR2693238 HR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR5818445 Other None
SAMEA3501046 RR-TB lineage4.8 None
ERR4821143 RR-TB lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR2693227 Other lineage4.9 None
SRR6045555 HR-TB None
SRR6046210 Other lineage4 None
SRR6045664 Other lineage4.2.1 None
SRR5818385 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR5818393 Other lineage4.9 None
SRR5818397 Other lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR5818409 Other lineage4.9 None
SRR5818422 Other lineage4.9 None
SRR5818413 HR-TB lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR5818436 Sensitive lineage4.9 None
SRR6045706 Sensitive lineage4 None
SRR5818440 Other lineage4.9 None
SRR5818437 MDR-TB lineage4.9 None
SRR5818446 Other lineage4.9 None
SRR5818456 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR5818457 Other lineage4.9 None
SRR5818469 Other lineage4.9 None
SRR6045795 HR-TB lineage2.2.1 None
SRR5535933 HR-TB None
SRR6046117 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6045843 Other lineage4.2.2.2 None
SRR6046133 HR-TB None
SRR6045892 Sensitive None
SRR6044819 Sensitive lineage4.9 None
SRR6044835 Sensitive lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044952 RR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6045191 Sensitive lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045359 Sensitive lineage4.9 None
SRR6045233 HR-TB None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046253 HR-TB lineage4.9 None
SRR6046299 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046397 Other None
ERR2851356 Sensitive lineage4.9 None
SRR6046492 Other None
SRR6046541 Other lineage4.9 None
SRR6046611 HR-TB lineage4.9 None
SRR6046644 HR-TB None