EBG00000313325 - n.470T>G


Drug resistance types
68 Sensitive 51 RR-TB 71 HR-TB 32 MDR-TB 13 Pre-XDR-TB 1 XDR-TB 126 Other
lineage Counts
lineage Count
lineage4.9 146
La1.7;lineage4.9 4
lineage4.3.3 3
M.canetti;lineage4.9 1
lineage2.2.1 35
La3;lineage4.9 9
lineage4.8 45
lineage2.2.2 5
lineage1.1.2;lineage6.2.3 1
lineage6.1.3 3
lineage2;lineage4 1
lineage2.2.1;lineage4.9 2
La1.2.BCG 1
lineage2.2 4
La3;lineage4 1
M.canetti;lineage4.9;lineage9 1
La1;lineage4.9 3
lineage4.8.1 2
lineage2.1;lineage4.9;lineage7 1
lineage4.1.2;lineage4.9 1
lineage4.1.1.3 5
lineage4.1.2 1
lineage4.1.2.1 7
lineage3.1.1 3
La1.8.1 6
lineage3 8
lineage2.2.1;lineage4 1
La1.2;La1.8.1 1
La2 1
lineage1;lineage4.9 1
lineage3.1.2;lineage4.1.1.3.1 1
La1.7.1;La1.7.X-unk4 1
lineage1.2.2.2 1
lineage2.2;lineage4 2
La1.3 3
lineage4.3.2.1 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.4.2 3
lineage1.1.1 1
La1;lineage4.1.2 1
lineage4.9;lineage7 4
lineage4.9;lineage9 1
lineage4.4.1.1.1 3
lineage4.7 1
lineage1.1.3.1 1
lineage4.5 2
lineage4.3.4 1
lineage4.3.4.2 1
lineage4.6.5 2
La1.7;lineage4.9;lineage7 1
lineage4.2.1 1
lineage4 4
lineage4.3.4.2.1 1
lineage3.1.2.2 1
La3;lineage4.3.4 1
lineage2.2.1.1 1
lineage2;lineage4.9 1
La1.7.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage1.1.1.1 1
lineage4.2;lineage4.9 1
lineage1.1.3.3 1
1
La1.7.1 1
lineage3.1.2.1 1
lineage4.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage6 1
spoligotype Counts
spoligotype Count
None 362
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5818437 RR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
SAMEA3501067 RR-TB lineage4.8 None
DRR185024 Other lineage2.2.2 None
SRR19295647 HR-TB lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
SRR5818385 Other lineage4.9 None
ERR978752 Other lineage4.8 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR911929 Other lineage4.8 None
SRR12708392 Other lineage2.2.1 None
ERR978750 RR-TB lineage4.8 None
ERR1023236 Other lineage6.1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR1034634 HR-TB lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR3283028 Other La3;lineage4 None
ERR4769442 Sensitive lineage4.9 None
SAMEA3501046 RR-TB lineage4.8 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR4769497 Other La1;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR5341373 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR911929_ERR911930 Other lineage4.8 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR867566 Other lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR5818446 Other lineage4.9 None
ERR978694_ERR978693 Other lineage4.8 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045217 Other lineage4.9 None
SRR18002974 Other lineage2.2.1 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
ERR926165 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SAMEA3501015 Other lineage4.8 None
SRR5818469 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Other lineage4.9 None
ERR9119669 MDR-TB lineage4.9 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR3283030 HR-TB lineage4.9 None
SRR7240476 Other La1.8.1 None
SRR17832802 HR-TB lineage3 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
ERR978748 Other lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR7240033 Other La1.2;La1.8.1 None
SRR1180312 Sensitive lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR7236177 Other La1.8.1 None
ERR978727 Other lineage4.8 None
SRR5818426 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR2514430 Other lineage3.1.2;lineage4.1.1.3.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR18002981 Other lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR6511621 HR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR926163 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR978751 Other lineage4.8 None
SRR5818411 RR-TB lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR4769552 Sensitive La1.3 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR3797081 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4811101 Other lineage4.4.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR7131145 Other lineage4.1.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR19303820 RR-TB lineage4.8 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797046 HR-TB lineage4.9 None
ERR978734 RR-TB lineage4.8 None
SRR7131195 Other lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR978726_ERR978727 RR-TB lineage4.8 None
ERR1023509 MDR-TB lineage4.9 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1238558 Other lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR3283018 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR978754 RR-TB lineage4.8 None
ERR978761 Other lineage4.8 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR11662690 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR978760 RR-TB lineage4.8 None
ERR867569 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR752229 Other lineage4.5 None
SRR22424765 HR-TB lineage4.8 None
ERR6358979 HR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
ERR9786639 Sensitive lineage4.8 None
ERR978733 RR-TB lineage4.8 None
SRR9971114 Other lineage2.2.1 None
ERR978755 RR-TB lineage4.8 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR4810624 MDR-TB lineage2.2 None
ERR4769530 RR-TB lineage4.9 None
ERR978694 Other lineage4.8 None
SRR20632814 Sensitive lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
SRR26159065 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR5818422 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR978756 Other lineage4.8 None
SRR13423649 Other lineage2.2.1 None
ERR4821143 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
ERR3797079 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
ERR9786076 Other lineage3 None
ERR4769554 RR-TB lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR9786592 Other lineage4.3.4.2 None
ERR4188247 HR-TB lineage4.9 None
ERR4815556 RR-TB lineage3 None
ERR7801175 HR-TB lineage4.6.5 None
DRR184629 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
SRR6046141 Other lineage4.9 None
ERR978726 RR-TB lineage4.8 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR20969731 Other lineage2.2.1 None
ERR978757 RR-TB lineage4.8 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR9971150 RR-TB lineage4.8.1 None
SRR1175487 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4818536 Other lineage4.9 None
SRR11342691 MDR-TB lineage2.2.1 None
ERR181887 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR4769514 Other La1.3 None
ERR400345 Other lineage4.9 None
SRR5818436 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR4816470 HR-TB lineage3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797063 Other La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4811031 Other lineage4.5 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR10315567 HR-TB lineage2.2.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR3283032 Other lineage4.9 None
ERR911930 Other lineage4.8 None
SRR3675582 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1172807 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SAMEA3450033 Other lineage4.8 None
ERR978693 Other lineage4.8 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR181744 HR-TB La3;lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR5818456 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR6358951 Sensitive lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR867567 RR-TB lineage3 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR2512423 Other lineage4.1.1.3 None
SRR5818393 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
DRR185000 Other lineage1.1.1.1 None
ERR9285979 RR-TB lineage3.1.1 None
SRR21677886 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR5818409 Other lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR978746 RR-TB lineage4.8 None
SRR6044835 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
SRR6045191 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
SRR5341456 Other lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
SRR5818445 Other lineage4.9 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR5818397 Other lineage4.9 None
DRR188519 Other lineage4.4.2 None
SRR5818440 Other lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR4817069 RR-TB None
SAMEA3501065 RR-TB lineage4.8 None
ERR3797029 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
ERR2513382 RR-TB lineage4.1.1.3 None
SRR5341330 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1180375 Sensitive lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR13180204 Other lineage3 None
ERR978747 Other lineage4.8 None
SRR5535933 Other lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
ERR3283046 Sensitive lineage4.9 None
SRR6045832 Other lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
ERR3797015 HR-TB lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR3283031 Other La3;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926157 Other lineage4.9 None
ERR3275941 RR-TB lineage4.3 nl
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR7236134 Other La1.8.1 None
ERR978735 Other lineage4.8 None
ERR978762 Other lineage4.8 None
SRR14782054 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR20969542 Other lineage4.4.2 None
ERR176778 HR-TB lineage4.9 None
SRR26159063 RR-TB lineage4.9 None
ERR926160 Other lineage4.9 None
SRR6855695 Sensitive lineage4.8 None
SRR7496471 Sensitive lineage4 None
SRR5818413 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
ERR4818583 Other lineage4.3.3 None
SRR5818432 MDR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR5818460 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176779 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
SAMEA3501063 RR-TB lineage4.8 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR21240161 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
DRR184982 Other lineage2.2.1 None
ERR9787362 Sensitive lineage6 None
ERR4596944 MDR-TB lineage3.1.1 None