EBG00000313325 - n.544G>A
Drug resistance types
54 Sensitive
35 RR-TB
19 HR-TB
39 MDR-TB
20 Pre-XDR-TB
0 XDR-TB
132 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 63 |
| La1.8.2 | 3 |
| lineage4.3.4.2 | 2 |
| La1.2 | 4 |
| lineage4.6.4 | 1 |
| lineage5.1.1 | 3 |
| lineage4.1.1.3 | 6 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.2 | 5 |
| lineage4.7 | 4 |
| lineage4.6.1.1 | 3 |
| lineage2.2 | 6 |
| lineage2.2.1.1 | 4 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.9;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 17 |
| lineage4.3.2.1 | 4 |
| 13 | |
| lineage4 | 14 |
| lineage2.2.1 | 31 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage3 | 11 |
| lineage1.1.3.1 | 2 |
| lineage1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.4.1.2 | 2 |
| La1.8.1 | 7 |
| lineage4.9.1 | 2 |
| lineage4.4.1.1 | 7 |
| lineage4.3.3 | 10 |
| La1.7.1 | 2 |
| lineage4.8 | 15 |
| lineage1.2.2.2 | 3 |
| lineage4.2.2.2 | 2 |
| lineage1.1.2 | 3 |
| lineage4.6.1 | 4 |
| lineage4.6 | 2 |
| lineage6.3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1.1.3.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.2.1 | 2 |
| lineage4.6.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | 1 |
| lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 | 1 |
| lineage4.3.4.2.1;lineage1.1.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.4 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage4.9;La1.8.1 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage4.2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 299 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5979784 | Sensitive | lineage4.9 | None | ERR6140667 | Other | La1.8.2 | None | ERR5979787 | Other | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR6149874 | Other | La1.8.2 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6198389 | Other | La1.2 | None | ERR702437 | HR-TB | lineage4.6.4 | None | ERR6201802 | Other | La1.2 | None | ERR6201843 | Other | La1.2 | None | ERR6201798 | Other | La1.2 | None | ERR6359073 | Sensitive | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR751338 | Other | lineage5.1.1 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | ERR846990 | Sensitive | lineage4.9 | None | ERR970453 | RR-TB | lineage4.1.2 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SRR1013530 | HR-TB | lineage4.9 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1062868 | HR-TB | lineage4.9 | None | SRR1106670 | Other | lineage4.9 | None | SRR1062869 | Pre-XDR-TB | lineage4.9 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140942 | Other | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1159158 | Other | lineage2.2.1 | None | SRR1162501 | Other | lineage2.2.1 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175473 | Other | lineage4.9 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180252 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR11972169 | HR-TB | lineage2.2 | None | SRR11972157 | MDR-TB | lineage2.2.1 | None | SRR11972166 | Sensitive | lineage1.1.3.1 | None | SRR11972163 | Sensitive | lineage1 | None | SRR11972159 | MDR-TB | lineage2.2.1 | None | SRR11972170 | HR-TB | lineage3 | None | SRR11972164 | MDR-TB | lineage2.2.1.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972171 | RR-TB | lineage2.2.2 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR13861312 | Other | lineage4.9 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861438 | Other | lineage4.9 | None | SRR13861457 | Other | lineage4.9 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR16156832 | RR-TB | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR17658580 | Sensitive | lineage4.4.1.2 | None | SRR1791940 | Other | La1.8.1 | None | SRR18213726 | Other | lineage3 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR21469201 | Other | La1.7.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR22424884 | Pre-XDR-TB | lineage2.2.1 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR22048375 | Other | lineage4.1.2.1 | None | SRR21469200 | Other | La1.7.1 | None | SRR21728339 | Other | lineage3 | None | SAMN02419540 | Other | lineage2.2.1 | None | ERR4815278 | Other | lineage4.8 | None | SRR3105762 | HR-TB | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750889 | Other | lineage4.4.1.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR1750926 | Other | lineage4.3.2.1 | za | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4815040 | Other | lineage4.2.2.2 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2229033 | Other | lineage4.8 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR1034791 | RR-TB | None | ERR2124088 | Other | lineage4.4.1.1 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR4817131 | Pre-XDR-TB | None | ERR2229780 | Other | lineage4.9 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR2229336 | Other | lineage4.8 | None | ERR2228822 | Other | lineage4.9 | None | ERR2229358 | Other | lineage4.8 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4816755 | Other | lineage4.1.1.3 | None | ERR2228874 | Other | lineage4 | None | ERR2228859 | RR-TB | lineage4 | None | ERR4818726 | Other | lineage4.1.2.1 | None | SRR4033523 | Other | lineage2.2 | None | ERR2228888 | Other | lineage4.8 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR2510736 | Other | lineage4.1.2.1 | None | ERR2510746 | Other | lineage2.2.1 | None | ERR2510807 | Other | lineage4.6 | None | ERR2510820 | Other | lineage4.8 | None | ERR2510813 | Sensitive | lineage4.8 | None | ERR2510831 | Other | lineage4.3.3 | None | ERR245790 | Sensitive | None | ERR1199065 | Sensitive | lineage4.6.1 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR2446433 | Other | lineage4.1.2.1 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR5341429 | HR-TB | lineage3.1.2.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR5341375 | Other | lineage4.9 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | ERR4819602 | Sensitive | lineage4.9 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SRR5341300 | Other | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4819867 | Other | lineage1.1.3.2 | None | SRR5431794 | Other | La1.8.1 | None | ERR4820819 | Sensitive | lineage4.7 | gb | SRR5341467 | Other | lineage4 | None | ERR1873459 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4821879 | Other | lineage4.6.1.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821167 | Other | lineage4.8 | gb | ERR4822049 | Sensitive | lineage4.3.3 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6044936 | Other | lineage4 | None | SRR6046152 | Other | lineage4.9 | None | SRR6044830 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6044883 | Sensitive | lineage2.2.1 | gb | SRR6045036 | Other | lineage4;lineage3 | None | SRR6045162 | Sensitive | lineage4.9 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6046015 | Other | lineage4.9 | None | ERR4829634 | Sensitive | lineage4.3.3 | it | ERR2851371 | Other | lineage4.9 | None | ERR4829196 | Other | lineage4.1.2 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045379 | Other | None | ERR4828990 | RR-TB | lineage4.6.2.2 | None | ERR4830705 | Sensitive | lineage4.1.2.1 | dz | ERR4829710 | MDR-TB | lineage4.2.1 | it | ERR4829010 | MDR-TB | lineage2.2.1 | it | SRR6046766 | Other | lineage3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | SRR6397441 | Other | lineage4 | None | SRR6397642 | RR-TB | None | SRR6152979 | Other | lineage4.7 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6397770 | Other | lineage4.7 | None | SRR6982140 | Other | lineage2.2 | None | SRR6153036 | Other | None | SRR6397727 | Other | lineage4.2.1.1 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR6896534 | Sensitive | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6896539 | MDR-TB | lineage3 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR6982275 | Other | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR7131018 | Sensitive | lineage4.3.1 | None | SRR7131035 | Sensitive | lineage4.8 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131129 | Sensitive | lineage4.1.2.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131185 | Other | lineage4.1.2.1 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131240 | Sensitive | lineage4.8 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535053 | Sensitive | lineage3 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7645834 | Other | lineage2.2.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR7535080 | HR-TB | lineage4.8 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR1023527 | RR-TB | lineage4 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR036185 | MDR-TB | lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR036225 | Other | lineage4.3.4.2.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | ERR036207 | Other | lineage4.9 | None | ERR036211 | Other | lineage4.9;lineage4.3.4.2.1;lineage1.1.3.2 | None | ERR036215 | Other | lineage4.8 | None | ERR036224 | HR-TB | lineage4.3.4.2.1;lineage1.1.3 | None | ERR037504 | Other | lineage4.9.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796627 | Other | lineage4 | None | ERR10796630 | HR-TB | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3439301 | Other | lineage4.9;La1.8.1 | None | ERR405191 | Other | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | ERR405209 | Sensitive | lineage4 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR4407557 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769429 | Other | lineage4.9 | None |
|---|
