Rv0668 - c.114G>C
Drug resistance types
16 Sensitive
42 RR-TB
17 HR-TB
34 MDR-TB
19 Pre-XDR-TB
1 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| 15 | |
| lineage4.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1 | 22 |
| lineage4.3.2.1 | 3 |
| lineage4.9 | 46 |
| lineage4.3.4.2.1 | 7 |
| lineage4 | 12 |
| lineage4.3.4.1;La1.7 | 1 |
| La1.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| La1.3 | 2 |
| lineage1.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 5 |
| lineage4.1.1.3 | 3 |
| lineage4.3.3 | 2 |
| lineage3 | 8 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 2 |
| lineage4.1.2.1 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.4.1.1 | 2 |
| La1.4 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage3.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| La3 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage5.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 171 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8217918 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR323107 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR11465627 | Sensitive | lineage4.3.4.2.1 | None | ERR11465833 | Sensitive | lineage4.3.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283053 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4769516 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6197035 | Other | lineage4.7 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR10808805 | Sensitive | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1180440 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16278274 | Other | La1.4 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4815310 | Other | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4815158 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | SRR3675488 | HR-TB | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814709 | Other | lineage4.1.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815550 | Other | lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816756 | RR-TB | None | ERR4817453 | Sensitive | lineage4 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4820284 | Other | lineage4.9 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR1023509 | Other | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4820192 | Other | La3 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821559 | Sensitive | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4830353 | Other | None | SRR6046492 | Other | None | SRR6046737 | Other | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR11465830 | Sensitive | lineage4.9 | None |
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