EBG00000313339 - n.839C>A


Drug resistance types
51 Sensitive 20 RR-TB 35 HR-TB 43 MDR-TB 24 Pre-XDR-TB 1 XDR-TB 121 Other
lineage Counts
lineage Count
lineage2.2.1;lineage4.5 1
lineage1.2.2.2 4
lineage4.9 78
lineage4.4.1.1 4
lineage4.3.3 12
lineage3.1.1;lineage4.9 1
lineage2.2.1 57
La1.8.1 8
La1.3 5
lineage4.3.2.1 3
lineage3.1.1 1
lineage4.3.4.2 4
lineage4.3.4.1 4
lineage4.9.1 2
lineage2.2.1;lineage4.9 4
lineage4.2.2.2 3
lineage4.8 12
lineage4.1.2.1 12
lineage1.2.1.1 1
lineage4.4.1.1.1 3
lineage3 9
lineage4 2
lineage4.6.5 2
lineage6.3.1 1
lineage2.2;lineage4.9 1
lineage4.2.2 2
lineage4.1.1.2 1
La1.7;lineage3.1;lineage4 1
lineage3.1.2.1;lineage4.9 1
lineage4.3.2 1
lineage4.1.1.3 7
La1.7;lineage4.9 3
lineage2;lineage4.9 1
lineage2.2.1;lineage2.2.2 1
lineage2.2.2 5
lineage4.3.4.2.1 4
lineage4.3.3;lineage4.8 4
lineage2.2.1;lineage4 2
lineage3.1.2.2 1
La1.7.1 1
lineage6.1.3 2
lineage4.2.1 3
lineage4.8.1 2
lineage4.1.1.1 3
lineage4.3;lineage4.9 1
lineage4.5 1
La1;lineage4.9 1
lineage5.1.1 1
lineage4.4.1.2 2
lineage4.4.2 4
lineage2.2.1.1 2
lineage4.3 1
lineage4.2.1.1 1
lineage4.1;lineage4.9 1
lineage4.1.3 1
spoligotype Counts
spoligotype Count
None 295
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR867572 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR2100067 Other lineage4.3.3 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
ERR5311077 Other La1.8.1 None
SRR1183054 Sensitive lineage4.9 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4769552 Sensitive La1.3 None
ERR10796560 Other lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR736831 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR19303818 Other lineage4.3.4.2 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR1175512 Sensitive lineage4.9 None
ERR10796598 Other lineage4.9 None
SRR18003042 Other lineage2.2.1 None
SRR3675389 Other lineage4.9 None
SRR18003032 Other lineage2.2.1 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
ERR11465189 RR-TB lineage4.9.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR867571 Other lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR1023509 MDR-TB lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR1196478 Other lineage4.9 None
ERR2027230 Other lineage4.2.2.2 None
ERR473334 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
SRR21722120 Sensitive lineage4.1.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR9786276 Sensitive lineage4.8 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR9786076 Other lineage3 None
SRR7131236 Other lineage4.3.4.2 None
SRR3675265 Other lineage4 None
SRR11342669 Other lineage4.8 None
SRR7131229 Other lineage4.1.2.1 None
ERR7801175 HR-TB lineage4.6.5 None
SRR6046141 Other lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR21727760 Other lineage2.2.1 None
ERR176741 Other lineage4.9 None
ERR502523 Other lineage6.3.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR228175 Sensitive lineage3 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
DRR188816 Other lineage4.2.2 None
ERR8975044 Other lineage4.1.1.2 None
SRR1175487 Sensitive lineage4.9 None
SRR18002976 Other lineage2.2.1 None
ERR10796571 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
SRR19303949 Other lineage4.3.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR19304104 Other lineage4.8 None
ERR5087846 Other La1.8.1 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR1181283 Sensitive lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR7069835 Other lineage2.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
ERR4972567 MDR-TB lineage4.3.2 None
ERR4818583 Other lineage4.3.3 None
SRR1172807 Sensitive lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR5007204 Other lineage4.1.2.1 None
SRR1181214 Other lineage4.9 None
SRR11342646 HR-TB lineage3 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR4769436 Other La1.3 None
ERR5979407 Other lineage3 None
SRR1180946 Sensitive lineage2;lineage4.9 None
DRR184982 Other lineage2.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR1172717 Sensitive lineage4.9 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR6359069 HR-TB lineage4.9 None
SRR3675509 Other lineage4.9 None
ERR10796636 Other lineage4.1.2.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR10869254 Pre-XDR-TB lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR18003045 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
ERR037504 Other lineage4.9.1 None
SRR21686597 Sensitive lineage4.1.2.1 None
SRR1173185 Other lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR18002876 MDR-TB lineage2.2.1;lineage2.2.2 None
ERR4817915 Other lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR12708419 Other lineage4.3.3 None
SRR1792012 Other La1.8.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR2100532 Sensitive lineage3 None
SRR1180410 Sensitive lineage4.9 None
SRR19303899 Other lineage3 None
SRR6046729 Other lineage3 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
SRR7070369 Other lineage1.2.2.2 None
SRR1180406 Sensitive lineage4.9 None
SRR18002964 Other lineage2.2.1 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR1180300 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
ERR867568 Other lineage2.2.1;lineage4 None
ERR6359070 Sensitive lineage4.9 None
SRR6046440 Other lineage3.1.2.2 None
SRR7131123 Other lineage4.8 None
SRR18002974 Other lineage2.2.1 None
ERR5162090 RR-TB lineage4.9 None
ERR9117827 Other lineage1.2.2.2 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR6045832 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR6046117 Other lineage4.9 None
ERR3806588 Other lineage6.1.3 None
ERR2027257 Other lineage4.1.2.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR19303817 Other lineage2.2.1 None
SRR10303325 MDR-TB lineage2.2.1 None
SRR6045909 Other lineage4.8.1 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR10796620 Other lineage4.1.1.1 None
ERR216965 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR867573 Other lineage4.9 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR5087596 Other La1.8.1 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR18002994 MDR-TB lineage4.2.2 None
ERR6359066 HR-TB lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
ERR10796592 Other lineage4.9 None
SRR18002981 Other lineage2.2.1 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR1175474 Other lineage4.9 None
ERR502517 Other lineage5.1.1 None
ERR485006 HR-TB lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1180250 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR7069074 Other lineage3 None
ERR323037 Other lineage4.9 None
ERR212114 Other lineage4.3.4.2.1 None
SRR18002967 HR-TB lineage2.2.1 None
SRR1172885 HR-TB lineage4.9 None
SRR18912069 Other lineage4.1.2.1 None
ERR10796577 Other lineage4.9 None
SRR19303907 Other lineage4.8 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR2600422 MDR-TB lineage2.2.1 None
SRR15508556 Other lineage4.3.4.1 None
ERR3468488 Other La1.8.1 None
ERR4769444 HR-TB lineage4.9 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR1180444 Sensitive lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR2886463 Sensitive lineage2.2.1 None
SRR7131145 Other lineage4.1.2.1 None
SRR21677886 Sensitive lineage4.9 None
ERR10796589 Other lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
SRR13423546 Other lineage4.4.2 None
ERR10762248 MDR-TB lineage4.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR1180391 Sensitive lineage4.9 None
SRR18003023 Other lineage2.2.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR10796553 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR18002980 Other lineage2.2.1 None
SRR8758877 MDR-TB lineage4.1.1.1 None
ERR4769555 Sensitive La1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR10796593 Other lineage4.3 None
SRR6785281 Other lineage4.2.1.1 None
SRR14801720 Other lineage4.8 None
SRR19304115 Other lineage4.1.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR6045384 Other lineage4.1.2.1 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1792011 Other La1.8.1 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR18002987 Other lineage2.2.1 None
SRR11349207 RR-TB lineage2.2.1 None
SRR1792022 Other La1.8.1 None
SRR1049675 HR-TB lineage2.2.1 None
ERR6359074 HR-TB lineage4.9 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR1181368 Other lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR1180345 Other lineage4.9 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR4769408 Other La1.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1180375 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR1180420 Sensitive lineage4.9 None
ERR3468613 Other La1.8.1 None
SRR7131147 Other lineage4.1.2.1 None
ERR038289 Other lineage4.3.3 None
ERR10796628 Other lineage4.3.3 None
SRR15316595 RR-TB lineage4.4.2 None
ERR7801176 RR-TB lineage4.6.5 None
SRR18909918 Other lineage2.2.1.1 None
ERR4769433 RR-TB lineage4.9 None
SRR7131161 Other lineage4.8 None
ERR10219876 Other lineage4.3.4.2 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR1184021 Sensitive lineage4.9 None
SRR10430377 MDR-TB lineage2.2.1 None
ERR2513405 Other lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002937 Other lineage2.2.1 None
SRR18913779 Other lineage3 None
SRR10315751 MDR-TB lineage4.8 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR4769514 Other La1.3 None
SRR18002963 Other lineage2.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR1180312 Sensitive lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR18002956 Other lineage2.2.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR6982141 Other lineage4.3.3 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1175052 HR-TB lineage4.9 None
ERR10796591 Other lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR11342684 HR-TB lineage4.4.1.1 None
SRR3675582 Other lineage4.9 None