EBG00000313325 - n.441C>G


Drug resistance types
77 Sensitive 39 RR-TB 57 HR-TB 50 MDR-TB 16 Pre-XDR-TB 1 XDR-TB 125 Other
lineage Counts
lineage Count
lineage4.9 167
lineage4.3.2;lineage4.9 1
lineage2.2 4
lineage4.1.1.3 4
La1.7;lineage4.9 2
lineage4.1.2.1 7
La1.7.1;lineage4.9 1
lineage2.2.1 41
lineage4.2.1 5
lineage4.4.1.2 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage3.1.1 3
lineage2.2.1;lineage4.9 3
lineage2.2.2 5
La1;lineage4.9 2
lineage4.1.2;lineage4.9 1
lineage4.1.2 1
lineage4.2.2.2 2
lineage3 8
lineage4.3.4.2 2
lineage6.1.2 2
lineage4.1.1.1 2
lineage2.2;lineage4.9 1
lineage4.8 11
lineage4.3.2.1 4
lineage2.1;lineage4.9 1
La1.3 3
lineage4 2
lineage4.3.3 5
lineage4.3.4.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.9 8
lineage2.2.1.2;lineage7 1
lineage2;lineage4.9 1
lineage2.2;lineage4 2
lineage4.4.2 4
M.canetti;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage1.1.1.1 1
lineage4.9;lineage7 4
lineage4.2;lineage4.9 1
La1.2.BCG 2
La3;lineage4 1
lineage4.5 2
lineage4.8.1 2
La1.6 1
lineage4.3.4 1
lineage4.4.1.1.1 2
La2;lineage2.2 1
lineage4.6.5 2
La1.7;lineage4.9;lineage7 1
lineage4.4 1
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
lineage4.3.4.2.1 2
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage2.2.1.1 2
lineage3.1.2.1;lineage4.9 2
lineage1.2.2.2 1
lineage4.4.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
lineage1.1.2;lineage6.2.3 1
lineage1.1.3.3 1
1
lineage2.1;lineage4.9;lineage7 1
La1.2 1
lineage4.6.1.2 2
La1.8.1 2
La1.7.1 1
lineage3.1.2.1 1
lineage4.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage2.2.1;lineage4 1
La2 1
lineage3.1.2.2 1
lineage4.6.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 365
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736875 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1180250 Other lineage4.9 None
SRR14801759 MDR-TB La1.7;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR21240161 Sensitive lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
SRR5818424 Sensitive lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR4812155 Other lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR6044875 Other lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9285979 RR-TB lineage3.1.1 None
SRR7131145 Other lineage4.1.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR867571 Other lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR5818452 Other lineage4.9 None
ERR9992784 XDR-TB lineage2.2.2 None
ERR867569 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR5818414 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4808964 RR-TB lineage2.2.1 None
SRR5341373 Other lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR5818446 Other lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
ERR4769554 RR-TB lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR3283046 Sensitive lineage4.9 None
ERR926165 Other lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR2513259 Other lineage3 None
SRR5818469 Other lineage4.9 None
ERR10219876 Other lineage4.3.4.2 None
ERR387051 RR-TB lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
ERR9787033 Sensitive lineage6.1.2 None
ERR926154 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR736848 Other lineage4.9 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR10869071 MDR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Other lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR5818399 Sensitive lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR5818423 RR-TB lineage4.9 None
ERR4769514 Other La1.3 None
SRR1181349 Sensitive lineage4 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR5818460 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR176779 HR-TB lineage4.9 None
SRR5818404 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1180319 Sensitive lineage4.9 None
SRR5818411 RR-TB lineage4.9 None
ERR4769436 Other La1.3 None
SRR5818448 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR5818456 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR4769552 Sensitive La1.3 None
SRR1172717 Sensitive lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR3797081 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR5818437 RR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR4813263 MDR-TB lineage4.8 None
ERR867567 RR-TB lineage3 None
ERR3797064 Other La3;lineage4.9 None
ERR3797062 RR-TB lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4811101 Other lineage4.4.2 None
SRR1180444 Sensitive lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
ERR4797313 Sensitive lineage2.2.1 None
SRR5818425 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR10796597 Other lineage4.3.3 None
SRR5818385 Other lineage4.9 None
DRR185000 Other lineage1.1.1.1 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR19303820 RR-TB lineage4.8 None
SRR1180391 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797086 Sensitive lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR12708392 Other lineage2.2.1 None
SRR7131195 Other lineage2.2.1 None
ERR4819383 RR-TB lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
ERR212125 HR-TB lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR1023509 MDR-TB lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR3283018 HR-TB lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR926155 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR3283028 Other La3;lineage4 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR108125 RR-TB lineage4.9 None
SRR5818440 Other lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR752229 Other lineage4.5 None
SRR22424765 HR-TB lineage4.8 None
SRR5818428 Sensitive lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR10993951 RR-TB La1.6 None
ERR176651 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
SRR26159065 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR5818422 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR3797079 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR13180204 Other lineage3 None
SRR5535933 Other lineage4.9 None
ERR7801175 HR-TB lineage4.6.5 None
ERR3797048 Other La3;lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
DRR184629 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR7801176 RR-TB lineage4.6.5 None
ERR3283031 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR21727760 Other lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR9119669 MDR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
ERR400345 Other lineage4.9 None
SRR5818436 Sensitive lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR20969542 Other lineage4.4.2 None
SRR7240033 Other La1.2;La1.8.1 None
SRR1180312 Sensitive lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR10796619 Sensitive lineage4.3.3 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926160 Other lineage4.9 None
SRR6855695 Sensitive lineage4.8 None
ERR4811031 Other lineage4.5 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR10315567 HR-TB lineage2.2.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR3675582 Other lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR5818413 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR4796351 Sensitive lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR5818432 MDR-TB lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR11342646 HR-TB lineage3 None
ERR108471 HR-TB lineage4.9 None
DRR184982 Other lineage2.2.1 None
ERR4596944 MDR-TB lineage3.1.1 None
SRR12708409 HR-TB lineage4.3.3 None
ERR3283014 Other La3;lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
DRR185024 Other lineage2.2.2 None
SRR5818393 Other lineage4.9 None
ERR3324368 RR-TB lineage1.1.2;lineage6.2.3 None
SRR1175512 Sensitive lineage4.9 None
SRR5818409 Other lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR4769452 Other lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR1180413 Sensitive lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR4769450 Other lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR9971168 Other lineage4.3.2.1 None
ERR4819863 RR-TB lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR5818445 Other lineage4.9 None
SRR5818397 Other lineage4.9 None
DRR188519 Other lineage4.4.2 None
ERR971389 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR4817069 RR-TB None
ERR6866807 RR-TB lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
ERR9786639 Sensitive lineage4.8 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR4821172 RR-TB lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR1180345 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR4769427 Other La1.2 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR13423649 Other lineage2.2.1 None
SRR1180375 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR5818462 Other lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1180420 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045217 Other lineage4.9 None
SRR18002974 Other lineage2.2.1 None
ERR3797065 RR-TB lineage4.9 None
SRR5818429 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
SRR16156804 Sensitive lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
ERR3283055 HR-TB lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR1792478 HR-TB La1.7.1 None
SRR20969708 HR-TB lineage2.2 None
SRR18909918 Other lineage2.2.1.1 None
ERR926156 Other lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR926157 Other lineage4.9 None
ERR3275941 RR-TB lineage4.3 nl
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR1184021 Sensitive lineage4.9 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR5818449 MDR-TB lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4596904 MDR-TB lineage3.1.1 None
SRR5163959 Other lineage4.9 None
ERR3275709 HR-TB lineage3 nl
SRR11342691 MDR-TB lineage2.2.1 None
ERR181887 Other lineage4.9 None
SRR7240476 Other La1.8.1 None
SRR17832802 HR-TB lineage3 None
SRR10315751 MDR-TB lineage4.8 None
SRR12708415 HR-TB lineage2.2.1 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR6045347 Other lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
ERR4798823 HR-TB lineage4 None
SRR12708414 HR-TB lineage2.2.1 None
SRR5818386 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR11662694 Other lineage4.9 None
SRR26159063 RR-TB lineage4.9 None
SRR5818426 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
ERR4769457 Other lineage4.9 None
ERR5979454 Pre-XDR-TB lineage3 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4816470 HR-TB lineage3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797063 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR400326 Other lineage4.9 None
SRR18002981 Other lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR867572 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR9971333 MDR-TB lineage4.1.1.3 None
ERR867570 RR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None