Rv0668 - c.117T>G
Drug resistance types
30 Sensitive
18 RR-TB
119 HR-TB
47 MDR-TB
20 Pre-XDR-TB
0 XDR-TB
140 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9 | 48 |
| 128 | |
| lineage4 | 18 |
| lineage4.1.2.1 | 17 |
| lineage4;lineage1.1 | 1 |
| lineage3 | 12 |
| lineage4.8 | 11 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage2.2.1 | 34 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.7 | 2 |
| lineage5.3 | 1 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 7 |
| lineage2.2 | 10 |
| lineage4.2.1 | 5 |
| La2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3;La3 | 1 |
| lineage4.1.1.3 | 3 |
| La1 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.8.1 | 2 |
| lineage6.1.1 | 2 |
| lineage4.1.3 | 2 |
| lineage2 | 3 |
| lineage3.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.1.1 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.3.2 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.1 | 1 |
| lineage4.1.1 | 2 |
| lineage6 | 2 |
| lineage6.3.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.3.4.2.1 | 6 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.3.3 | 3 |
| lineage3.1 | 2 |
| lineage1.2.1.2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 2 |
| La1.7.1 | 1 |
| lineage2.1 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9.1 | 1 |
| lineage3.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 374 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818394 | Other | lineage4.9 | None | ERR4818615 | Other | None | SRR5007188 | Other | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR2514692 | Other | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR6045892 | Sensitive | None | ERR2514821 | Other | lineage2.2.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693257 | Other | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4819932 | Other | lineage4.7 | None | SRR5341333 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045526 | HR-TB | None | SRR6045817 | Sensitive | lineage4.8 | gb | SRR6044790 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046397 | Other | None | SRR6046540 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR3170402 | Sensitive | lineage5.3 | gh | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6785413 | Other | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR6785527 | Sensitive | lineage2.2.1 | None | SRR6789626 | Other | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | SRR7496517 | Other | None | SRR7496509 | Other | None | ERR323045 | HR-TB | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR1023302 | MDR-TB | lineage3;La3 | None | ERR036207 | Other | lineage4.9 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1034652 | Other | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR11049020 | Other | lineage4.8 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283010 | Other | La1 | None | ERR3283027 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283043 | Other | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3797014 | Other | None | ERR3445503 | HR-TB | None | ERR3797024 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797058 | Other | lineage4.9 | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797071 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4810741 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4800341 | Other | lineage3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR6359045 | HR-TB | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR736839 | Other | None | ERR6866410 | Sensitive | None | ERR6866807 | HR-TB | lineage4 | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR702404 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9117709 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786443 | Sensitive | lineage4.8 | None | ERR9786440 | Other | lineage4.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786843 | Other | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9787197 | Other | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR990545 | Other | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1169194 | Other | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1173118 | Other | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1173166 | Other | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173310 | MDR-TB | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173778 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175090 | Other | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1180440 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13837613 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837498 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR13837707 | Other | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR16156832 | RR-TB | None | SRR15368973 | Other | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR19304036 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303884 | HR-TB | None | ERR11081864 | Other | lineage3 | None | SRR20969677 | HR-TB | lineage2 | None | ERR11081257 | Other | lineage4.8 | None | ERR11081258 | Other | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4815158 | Sensitive | lineage4.9 | None | ERR4815604 | HR-TB | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675465 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3416776 | Other | lineage2.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675234 | Other | None | ERR181824 | HR-TB | lineage4 | None | SRR3675311 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR4815752 | Other | lineage4.9 | None | ERR4815555 | Sensitive | lineage4.1.2.1 | None | ERR176740 | HR-TB | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR176751 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR4816999 | Other | None | ERR212001 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR4817037 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | SRR3675572 | Other | None | ERR4817060 | RR-TB | None | ERR4816322 | Other | lineage4.9 | None | SRR3675571 | HR-TB | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR4816550 | Sensitive | lineage4.9 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742665 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816852 | Other | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4817735 | Other | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR245758 | Other | lineage4.9.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR7496472 | Other | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | ERR2513229 | MDR-TB | lineage2.2.1 | None |
|---|
