lineage | Count |
---|---|
lineage4.9 | 13 |
lineage2.2 | 2 |
lineage5 | 1 |
lineage2.2.1 | 7 |
lineage3.1 | 1 |
lineage3 | 3 |
lineage4.3.3 | 3 |
lineage4.9;lineage4.2.1 | 1 |
lineage1.2.2.2 | 1 |
lineage4.3.4.1 | 1 |
lineage4.1.1.3 | 2 |
lineage6.2.3;lineage1.1.2 | 1 |
La1.8.1 | 1 |
lineage4.7 | 1 |
lineage4.8;lineage4.3.3 | 2 |
lineage3.1.1 | 1 |
lineage4 | 2 |
lineage4.4.2 | 1 |
lineage4.6.2.2 | 1 |
La1.7.1 | 1 |
spoligotype | Count |
---|---|
None | 46 |
ID | Drug resistance | Lineage | Country iso2 | ERR4815158 | Sensitive | lineage4.9 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4820746 | RR-TB | lineage3 | None | ERR036207 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR21469201 | Other | La1.7.1 | None |
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