Rv0667 - p.Thr1078Ala
Drug resistance types
8 Sensitive
44 RR-TB
7 HR-TB
22 MDR-TB
16 Pre-XDR-TB
1 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| La2 | 1 |
| lineage2.2.2 | 2 |
| lineage4.9 | 24 |
| lineage4.3.3 | 3 |
| lineage2.2.1 | 19 |
| lineage4.8 | 11 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.3 | 7 |
| lineage3 | 12 |
| La1.7.1 | 2 |
| lineage4.4.2 | 3 |
| lineage1.2.2 | 1 |
| lineage4 | 8 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.1 | 1 |
| lineage3.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.1.2 | 1 |
| 4 | |
| lineage4.4.1.1 | 5 |
| lineage4.2.1.1 | 1 |
| lineage6 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage1.1.2 | 2 |
| lineage1.2.2.2 | 2 |
| lineage3.1.1 | 4 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| La3 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage6.2.3;lineage1.1.2 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.3 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.8;lineage4.3.3 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 144 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13888750 | Other | La2 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR21469201 | Other | La1.7.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21677854 | Other | lineage4.1.1.3 | None | SRR21469200 | Other | La1.7.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815301 | Other | lineage4.4.2 | None | SRR3675475 | Other | lineage4.1.1.3 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814312 | Other | lineage4 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4817478 | Other | lineage3 | None | ERR4815502 | Other | lineage4.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675509 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4815909 | Other | lineage4.8 | None | ERR4816991 | Sensitive | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816756 | RR-TB | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4818274 | Other | lineage4 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2513681 | Other | lineage1.1.2 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819456 | Other | lineage4.8 | None | ERR4820324 | Other | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR1023509 | Other | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820833 | HR-TB | None | SRR6045516 | Other | lineage3.1.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4821057 | HR-TB | lineage4 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4822104 | RR-TB | lineage3 | None | SRR6045604 | Sensitive | La3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6045909 | Other | lineage4.8 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6046839 | Other | lineage4.9 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
