lineage | Count |
---|---|
lineage4 | 6 |
lineage3 | 7 |
lineage4.3.4.2 | 1 |
lineage4.9 | 59 |
lineage4.1.2.1 | 3 |
La1.8.1 | 4 |
lineage4.3.2.1 | 3 |
lineage2.2.1 | 11 |
La1.3 | 4 |
lineage2.2.2 | 1 |
lineage4.8 | 5 |
lineage5.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.4.2.1 | 4 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
3 | |
La1.6 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage3.1.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 123 |
ID | Drug resistance | Lineage | Country iso2 | ERR2229233 | Sensitive | lineage4 | None | ERR4820266 | RR-TB | lineage3 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6045320 | Other | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR5087846 | Other | La1.8.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9119120 | Other | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1140736 | RR-TB | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1172717 | Other | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR4815310 | Other | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815550 | Other | lineage4 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None |
---|