lineage | Count |
---|---|
lineage4.8 | 9 |
lineage4.9 | 32 |
lineage2.2.1 | 12 |
lineage4.1.2 | 1 |
lineage2.2.2 | 2 |
lineage4.1.2.1 | 3 |
lineage4.4.2 | 1 |
La1.8.1 | 1 |
lineage4.3.4.2.1 | 3 |
lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
lineage3;lineage4 | 1 |
lineage4.1.2.1;lineage4.9 | 1 |
lineage3 | 7 |
La1.6 | 1 |
lineage4.3.2 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2;lineage4.9 | 1 |
lineage4.3.2.1 | 3 |
La1.3 | 1 |
lineage4 | 2 |
lineage2.2.1;lineage4.9 | 2 |
lineage4.1.2.1;lineage4.4.1.1 | 1 |
lineage4.2;lineage4.6.3;lineage4.9 | 1 |
lineage4.1.2.1;lineage4.4.1 | 1 |
lineage4.3.3 | 1 |
lineage5.1.1 | 1 |
spoligotype | Count |
---|---|
None | 92 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SAMEA3501073 | RR-TB | lineage4.8 | None |
ERR4821172 | RR-TB | lineage4.9 | None |
SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5908124 | Other | lineage4.8 | None |
ERR067712 | Sensitive | lineage4.9 | None |
SRR11342682 | Other | lineage4.1.2 | None |
SRR10315751 | MDR-TB | lineage4.8 | None |
SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None |
ERR502473 | RR-TB | lineage4.9 | None |
ERR6866125 | Sensitive | lineage4.1.2.1 | None |
SRR16157123 | Other | lineage4.9 | None |
SRR20969542 | Other | lineage4.4.2 | None |
ERR4820030 | Other | lineage4.9 | None |
ERR4821272 | RR-TB | lineage4.1.2.1 | None |
ERR5311077 | Other | La1.8.1 | None |
ERR4813263 | MDR-TB | lineage4.8 | None |
SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None |
ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
ERR9119120 | Other | lineage4.8 | None |
SRR1173740 | Other | lineage3;lineage4 | None |
SRR9971113 | Other | lineage2.2.1 | None |
SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None |
ERR4819383 | RR-TB | lineage4.9 | None |
SRR9971112 | Other | lineage2.2.1 | None |
SRR1062918 | Other | lineage3 | None |
ERR4819863 | RR-TB | lineage4.9 | None |
SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None |
SRR1175513 | Sensitive | lineage4.9 | None |
SRR10993951 | RR-TB | La1.6 | None |
ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
SRR1180375 | Sensitive | lineage4.9 | None |
SRR1180300 | Sensitive | lineage4.9 | None |
ERR502481 | RR-TB | lineage4.9 | None |
SRR1180444 | Sensitive | lineage4.9 | None |
ERR9119733 | MDR-TB | lineage2.2.1 | None |
ERR6866241 | Other | lineage4.3.2 | None |
SRR18909918 | Other | lineage2.2.1.1 | None |
ERR4820266 | Sensitive | lineage3 | None |
SRR1049672 | Other | lineage3 | None |
ERR4815550 | Other | lineage2.2;lineage4.9 | None |
ERR4769508 | RR-TB | lineage4.9 | None |
ERR502479 | RR-TB | lineage4.9 | None |
SRR10315567 | HR-TB | lineage2.2.1 | None |
ERR1063846 | HR-TB | lineage4.9 | None |
ERR502478 | RR-TB | lineage4.9 | None |
ERR3797085 | Other | lineage4.9 | None |
SRR9970981 | RR-TB | lineage4.3.2.1 | None |
SRR12708392 | Other | lineage2.2.1 | None |
ERR4769436 | Other | La1.3 | None |
SRR6046376 | Other | lineage3 | None |
ERR5987263 | MDR-TB | lineage2.2.1 | None |
SRR1181349 | Sensitive | lineage4 | None |
ERR978767 | RR-TB | lineage4.8 | None |
ERR978766 | RR-TB | lineage4.8 | None |
ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None |
ERR3797065 | RR-TB | lineage4.9 | None |
SRR1180413 | Sensitive | lineage4.9 | None |
SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None |
SRR1196478 | Other | lineage4.9 | None |
SRR9971168 | Other | lineage4.3.2.1 | None |
SRR1173770 | Other | lineage4.9 | None |
SRR1173281 | Other | lineage3 | None |
SRR1180355 | Sensitive | lineage4.9 | None |
SRR1181256 | Other | lineage4.9 | None |
SRR1180312 | Sensitive | lineage4.9 | None |
SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None |
ERR4769530 | RR-TB | lineage4.9 | None |
ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None |
SRR1140736 | Other | lineage4.1.2.1 | None |
ERR4815310 | Other | lineage2.2.1;lineage4.9 | None |
SRR1180410 | Sensitive | lineage4.9 | None |
ERR4798823 | HR-TB | lineage4 | None |
SRR11349147 | RR-TB | lineage4.3.2.1 | None |
SRR1140716 | Other | lineage3 | None |
SRR1173170 | Other | lineage4.9 | None |
ERR4808964 | RR-TB | lineage2.2.1 | None |
SRR12708414 | HR-TB | lineage2.2.1 | None |
SRR1181403 | Other | lineage4.9 | None |
ERR4769417 | Pre-XDR-TB | lineage4.9 | None |
SRR15315797 | RR-TB | lineage2.2.1 | None |
ERR978765 | RR-TB | lineage4.8 | None |
SRR1049673 | Pre-XDR-TB | lineage3 | None |
SRR12708409 | HR-TB | lineage4.3.3 | None |
ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
ERR502474 | RR-TB | lineage4.9 | None |
SRR1180391 | Sensitive | lineage4.9 | None |
SRR6046839 | Other | lineage4.9 | None |
SRR1140753 | RR-TB | lineage4.3.4.2.1 | None |
ERR751345 | Other | lineage5.1.1 | None |
SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None |