EBG00000313325 - n.445C>G
Drug resistance types
102 Sensitive
31 RR-TB
47 HR-TB
29 MDR-TB
17 Pre-XDR-TB
1 XDR-TB
132 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 107 |
| lineage3 | 17 |
| lineage4.8 | 12 |
| 46 | |
| lineage4.5 | 3 |
| lineage1.1.2 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.1.2.1 | 16 |
| lineage4.3.2 | 2 |
| lineage2.2.1 | 33 |
| lineage4 | 33 |
| lineage4.1.1.3 | 5 |
| lineage1.1.1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.2.1 | 2 |
| lineage4.3.3 | 4 |
| lineage4.1 | 2 |
| La1.8.1 | 7 |
| lineage4.3 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 3 |
| lineage4.8.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage2.2.2 | 3 |
| lineage4.3.4.2 | 2 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage3.1.1 | 2 |
| La1.3 | 8 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage3.1.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.4.2 | 2 |
| lineage6 | 2 |
| lineage6.1.3 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.4.1.1.1 | 2 |
| La1.6 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage2 | 1 |
| La2 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.4 | 1 |
| lineage4.4 | 1 |
| lineage3.1.3 | 2 |
| lineage1.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1 | 1 |
| lineage4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 359 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675552 | RR-TB | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | ERR2229760 | Other | lineage4.8 | dk | ERR4817069 | RR-TB | None | ERR2446509 | Other | lineage3 | nl | SRR3675571 | HR-TB | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4817131 | Pre-XDR-TB | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816656 | HR-TB | None | SRR5818386 | Other | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2512986 | Other | lineage3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819357 | Other | lineage4.9 | None | ERR4818333 | Sensitive | lineage1.1.2 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4818536 | Other | lineage4.9 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818929 | HR-TB | None | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819314 | Other | lineage1.1.1 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819462 | Other | lineage4 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820586 | Other | lineage3 | gb | ERR2515230 | Sensitive | lineage4.8 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | None | ERR4820193 | Other | lineage3 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045555 | HR-TB | None | ERR4821725 | Other | lineage4.8.2 | gb | SRR5818394 | Other | lineage4.9 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818423 | MDR-TB | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR5818425 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045010 | Other | lineage4 | None | ERR2851354 | RR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046442 | Other | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6046839 | Other | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR5087596 | Other | La1.8.1 | None | ERR3275190 | Other | lineage3 | nl | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323039 | HR-TB | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR323053 | HR-TB | None | DRR185000 | Other | lineage1.1.1.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3797036 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4024991 | Other | None | ERR3797068 | Other | La1.8.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769408 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769514 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769551 | Other | La1.3 | None | ERR4797313 | HR-TB | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4797264 | Sensitive | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR5908124 | Other | lineage4.8 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4811101 | Other | lineage4.4.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6359069 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR6866241 | Other | lineage4.3.2 | None | ERR6866410 | Sensitive | None | ERR736835 | HR-TB | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR9117740 | Other | lineage3.1.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9119120 | Other | lineage4.8 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787362 | Sensitive | lineage6 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1172717 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172310 | HR-TB | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1173740 | Other | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1180345 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR16278274 | Other | La1.4 | None | SRR16157123 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1791747 | Other | La1.8.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR21469201 | Other | La1.7.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815310 | Other | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR1750944 | Other | lineage4.1.2 | za | SRR3675246 | Sensitive | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR1750938 | Other | lineage4.4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4815550 | Other | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR176740 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | SRR3675522 | Other | None | ERR2027220 | Other | lineage3.1.3 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4816113 | Sensitive | lineage4.1.1 | None |
|---|
