lineage | Count |
---|---|
24 | |
lineage4.9 | 11 |
lineage4.4.1.1 | 3 |
lineage4.2.1.1 | 1 |
lineage4.3.4.1 | 1 |
lineage2.2.1 | 21 |
lineage4.1.1.3 | 1 |
lineage4.3.4.1;La1.7 | 1 |
La1.2 | 1 |
lineage4 | 2 |
lineage4.9;La1.3 | 1 |
lineage2.2.1.1 | 4 |
lineage1.1.1 | 1 |
lineage4.2.1 | 1 |
lineage9;lineage3.1 | 1 |
lineage2.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage3 | 1 |
lineage3.1.2.1 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 79 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046482 | HR-TB | None | ERR4830353 | Other | None | SRR6896229 | Other | lineage4.9 | None | SRR6046824 | HR-TB | None | SRR6896383 | RR-TB | lineage4.4.1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6896545 | Other | lineage4.9 | None | ERR502889 | Other | None | ERR11465801 | Other | lineage4.3.4.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR133986 | HR-TB | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR3797043 | HR-TB | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR403298 | HR-TB | lineage4 | None | ERR4798406 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769553 | RR-TB | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173310 | MDR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR16156832 | RR-TB | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR4815310 | Other | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22251329 | Other | lineage2.1 | None | ERR158583 | HR-TB | None | SRR2101471 | RR-TB | lineage4.4.1.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SAMN02585910 | Other | lineage2.2.1 | None | SRR3675488 | HR-TB | None | SRR5341418 | Other | None | SRR3675502 | Other | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage4 | None | SRR3675550 | Other | None | ERR2229791 | RR-TB | lineage4.9 | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | ERR4815079 | RR-TB | lineage3 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR1035162 | Other | None | ERR2432997 | Other | lineage4.8 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045399 | Other | None |
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