Rv1630 - c.820T>C


Drug resistance types
60 Sensitive 42 RR-TB 94 HR-TB 36 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 113 Other
lineage Counts
lineage Count
lineage4.9 156
lineage3;lineage4 1
lineage6.1.3 2
lineage4.8 19
lineage4.1.1.1 2
La3;lineage4.9 9
lineage4.9;lineage6.1.3 1
La1.7;lineage3.1;lineage4 1
lineage4.4.1.1 2
lineage2.2.1 29
lineage4.6.3;lineage4.9 1
lineage2.2.1;lineage4.5 1
lineage5.1.1 1
lineage4 5
lineage3 12
lineage1.1.2 3
lineage4.1.2.1 6
La1.7;lineage4.9;lineage7 3
lineage4.2.1 4
lineage2.1 1
lineage4.6.1.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage4.3.1;lineage4.9;lineage6 1
lineage2.2.1.2 2
lineage4.1.2 3
La1;lineage4.1.2 1
lineage4.9;lineage7 1
lineage1.1.1.1 1
lineage4.1.1.3 2
lineage2;lineage4 1
lineage2.2.1;lineage4.9 2
lineage4.8;lineage4.9 2
La1.7;lineage4.9;lineage6 1
lineage4.8.1 2
lineage4.2.1.1;lineage4.3.3 1
lineage4.3.3 5
lineage4.1.2;lineage4.9 1
lineage2.2.2 3
lineage4.6.1.2 2
lineage3.1.2.1 4
La1.8.1 3
lineage4.3.4.2 2
lineage1.2.1.1 1
lineage4.3.4.2.1 6
lineage2.2;lineage4.9 1
La1;lineage2;lineage4.9 1
La2 1
lineage3.1.2.1;lineage4.9 1
lineage4.9;lineage6.3 1
lineage2.2.1.2;lineage7 1
La1.7;lineage4.9 1
La1.3 1
lineage2.2.1.1 2
La1;lineage4.9 3
lineage4.4.1.1.1 1
La1.7.X-unk4 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.3.2.1 2
lineage4.6.2.2 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.2.BCG 3
lineage4.7 1
lineage4.2;lineage4.9 2
lineage1.1.3.1 1
lineage4.5 1
La3;M.canetti;lineage4.9 1
lineage1.1.1 1
lineage2.2;lineage4 1
lineage4.4.2 2
lineage1;lineage4.9 1
La1.2.BCG;lineage4.9 1
lineage4.3.1 1
lineage4.9.1 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.4.1.2 1
La3;lineage4 1
lineage4.1.1.3.1 1
2
lineage4.1.1.2 1
lineage3.1.3 2
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 358
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323115 Sensitive lineage4.9 None
SRR3675230 Other lineage3;lineage4 None
ERR867573 Other lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR4818536 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR1063883 HR-TB lineage4.9 None
ERR978765 RR-TB lineage4.8 None
ERR176643 Other La3;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR26399490 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4829816 RR-TB lineage4.4.1.1 None
SRR15315797 RR-TB lineage2.2.1 None
ERR124636 HR-TB lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR3797063 Other La3;lineage4.9 None
ERR926160 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR5341461 HR-TB lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR751345 Other lineage5.1.1 None
SRR6511621 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
SRR3675585 HR-TB lineage4.9 None
SRR3675235 HR-TB lineage4.9 None
ERR4815079 RR-TB lineage3 None
ERR978751 Other lineage4.8 None
SRR6046376 Other lineage3 None
ERR4796254 Other lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR9613550 HR-TB lineage4.1.2.1 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
ERR4831618 MDR-TB lineage2.1 None
ERR3283014 Other La3;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR10809074 HR-TB lineage4.9 None
SRR10315556 Sensitive lineage2.2.1 None
ERR6359069 HR-TB lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR12416842 HR-TB lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4819546 HR-TB lineage3 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR3797047 MDR-TB lineage4.9 None
ERR978752 Other lineage4.8 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR19303820 RR-TB lineage4.8 None
SRR11342658 RR-TB lineage4.1.2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR4797184 HR-TB lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR5341467 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4797474 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR2512606 HR-TB lineage3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1175127 Other lineage2.2.1.2 None
SRR7070223 HR-TB lineage3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR2693252 HR-TB lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR4816964 HR-TB lineage4.9 None
ERR4816476 Other lineage3.1.2.1 None
SRR16156697 RR-TB lineage2.2.1 None
ERR4769554 RR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR9786592 Other lineage4.3.4.2 None
ERR6866639 HR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR5341400 Sensitive lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR867575 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
SRR5341384 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR6981999 Sensitive lineage2.2.1 None
SRR6045347 Other lineage4.9 None
ERR4819528 RR-TB lineage3 None
SRR13888750 Other La2 None
ERR926158 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR1180996 Other lineage4.9 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR867570 RR-TB lineage4.9 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR4769436 Other La1.3 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
ERR3797062 RR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR6044876 Sensitive lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
SRR11349147 RR-TB lineage4.3.2.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR5341425 Other lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR502510 HR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR1915487 Other La1.2.BCG None
ERR473334 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
SRR5341469 HR-TB lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR6045053 Other lineage4 None
ERR9786597 Other lineage4.6.2.2 None
SRR6045795 Other lineage2.2.1 None
SAMEA3501065 RR-TB lineage4.8 None
ERR245675 Sensitive lineage1.1.2 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR137286 Other lineage4.9 None
ERR752229 Other lineage4.5 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4797264 HR-TB lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR6359070 Sensitive lineage4.9 None
ERR4798099 HR-TB lineage4.9 None
ERR11465604 HR-TB lineage4.8.1 None
SRR6046839 Other lineage4.9 None
SRR1915479 Other La1.2.BCG None
SRR1159378 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR16156804 Sensitive lineage4.9 None
SRR11972425 Pre-XDR-TB lineage2.2.1 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR926165 Other lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675552 Other lineage4.9 None
SRR10315466 RR-TB lineage2.2.1 None
SRR6046141 Other lineage4.9 None
ERR6866410 HR-TB lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
ERR4596902 MDR-TB lineage3 None
SRR12142339 HR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
ERR4819314 HR-TB lineage1.1.1 None
ERR926154 Sensitive lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341300 HR-TB lineage4.9 None
SRR11342682 Other lineage4.1.2 None
ERR978735 Other lineage4.8 None
ERR4816762 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
SRR16156817 Other lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
SRR6046593 Other lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4821655 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR20969542 Other lineage4.4.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
SRR7236177 Other La1.8.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR323066 HR-TB lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR6359066 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341308 HR-TB lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR3283011 Other La3;lineage4.9 None
ERR3797085 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR14801652 HR-TB lineage4.3.3 None
ERR4814639 HR-TB lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR7070195 Sensitive lineage3.1.2.1 None
ERR323062 HR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4815471 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR323107 HR-TB lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR978767 RR-TB lineage4.8 None
ERR4829039 RR-TB lineage4.3.1 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR3797064 Other La3;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SAMEA3501067 RR-TB lineage4.8 None
SRR3675246 Other lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
SRR5341455 Sensitive lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1915485 Other La1.2.BCG None
SRR1180413 Sensitive lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR6045892 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR1023509 MDR-TB lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
SRR1735598 RR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR11465333 Sensitive lineage4.3.4.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR502511 HR-TB lineage4.9 None
ERR3283028 Other La3;lineage4 None
DRR188519 Other lineage4.4.2 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR1063896 HR-TB None
ERR4796577 HR-TB None
ERR6358979 HR-TB lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
ERR3797029 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR4769530 RR-TB lineage4.9 None
ERR11488417 MDR-TB lineage4.1.2.1 None
SRR6046385 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4818252 HR-TB lineage4.1.1.2 None
ERR4819357 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR6046046 Other lineage4.9 None
SRR5341298 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1181256 Other lineage4.9 None
ERR702405 HR-TB lineage4.9 None
SRR6046492 Other lineage4.9 None
ERR9786076 Other lineage3 None
SRR3675270 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR4816717 RR-TB lineage3.1.2.1 None
SRR6045832 Other lineage4.9 None
SRR1140724 Other lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
SRR7535082 Other lineage4.9 None
ERR4457829 MDR-TB lineage4.1.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR926156 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR4820266 Sensitive lineage3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR3283031 Other La3;lineage4.9 None
SRR18913742 Sensitive lineage3.1.3 None
ERR736848 Other lineage4.9 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
ERR926157 Other lineage4.9 None
ERR067712 Sensitive lineage4.9 None