EBG00000313325 - n.626G>A
Drug resistance types
24 Sensitive
8 RR-TB
19 HR-TB
7 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 52 |
| lineage4.3.3 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.2.2 | 3 |
| lineage2.2.1 | 16 |
| lineage4.8 | 4 |
| lineage3 | 9 |
| lineage4.1.2.1 | 5 |
| lineage4.7 | 2 |
| lineage1.2.2.2 | 1 |
| La1.3 | 6 |
| La1.8.1 | 2 |
| lineage2.2.2 | 2 |
| lineage1.1.1 | 2 |
| La1.6 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3 | 5 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.4 | 1 |
| lineage4 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| La1.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 1 |
| La1.4 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818414 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR867566 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR4769493 | Other | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4829360 | Sensitive | lineage4.7 | None | SRR6046250 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR3275190 | Other | lineage3 | nl | SRR5818391 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | SRR7236399 | Other | La1.8.1 | None | DRR185024 | Other | lineage2.2.2 | None | SRR7236330 | Other | La1.8.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR5818459 | Other | lineage4.9 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR502470 | RR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR7496523 | Other | lineage4.7 | None | ERR867569 | Other | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | ERR4769408 | Other | La1.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR6045347 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5818466 | Other | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR736831 | Other | lineage4.9 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR5818415 | Sensitive | lineage4.9 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4769418 | Other | La1.2 | None | ERR4818831 | Other | lineage3 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069922 | Other | lineage2.2.1 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR5818394 | Other | lineage4.9 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR7069837 | Sensitive | lineage4.1.1.3 | None | SRR7069391 | Other | lineage4.9 | None | ERR4816571 | Sensitive | lineage1.1.2 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR4769514 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR5818386 | Other | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR485006 | HR-TB | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4814976 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR323037 | Other | lineage4.9 | None | DRR184982 | Other | lineage2.2.1 | None | SRR5818455 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR5818425 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR21713567 | Other | lineage4.5 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4769555 | Sensitive | La1.3 | None | SRR16278274 | Other | La1.4 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR4796577 | HR-TB | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb |
|---|
