EBG00000313325 - n.626G>A
Drug resistance types
44 Sensitive
17 RR-TB
20 HR-TB
12 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
137 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 18 |
| lineage4.3.3 | 5 |
| 6 | |
| lineage2.2 | 2 |
| lineage4.9 | 66 |
| lineage4.1.2.1 | 12 |
| lineage4 | 13 |
| lineage4.3.2.1 | 2 |
| lineage4.8 | 10 |
| lineage1.2.1.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.4.1 | 1 |
| lineage4.1 | 1 |
| lineage3 | 21 |
| lineage3.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.6.2.2 | 3 |
| lineage4.1.1 | 3 |
| lineage4.4.1.1 | 8 |
| lineage4.1.2 | 4 |
| lineage4.3.2 | 1 |
| lineage1.1.1 | 3 |
| lineage4.5 | 5 |
| lineage4.6.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.3.4.2.1 | 2 |
| La3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.7 | 4 |
| lineage1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.2 | 2 |
| La1.8.1 | 4 |
| La1.3 | 7 |
| lineage4.9;La1.3 | 3 |
| La1.2 | 1 |
| lineage3.1.1 | 1 |
| La1.6 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.3 | 1 |
| La1.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| La2 | 1 |
| lineage4.4 | 1 |
| lineage2.2.1.1 | 2 |
| La1.7.1 | 1 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 246 |
Geographic prevalence
Country level data for this variant is available for 40 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814690 | Sensitive | lineage2.2.1 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | ERR4815310 | Other | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR4814583 | Sensitive | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4815471 | Other | lineage4.9 | None | ERR1750943 | Sensitive | lineage4 | None | ERR1750908 | Sensitive | lineage4 | None | ERR1750926 | Other | lineage4.3.2.1 | za | ERR4815036 | Sensitive | lineage4.8 | None | ERR4814801 | Other | lineage4.8 | gb | SRR3675245 | Other | lineage4.1.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | ERR1750938 | Other | lineage4.4.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4815550 | Other | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816001 | Other | lineage3 | None | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR4816964 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2446509 | Other | lineage3 | nl | ERR4816417 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR3275709 | HR-TB | lineage3 | nl | ERR4816571 | Other | lineage1.1.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb | SRR5818386 | Other | None | ERR4818831 | Other | lineage3 | None | ERR4817434 | Other | lineage3 | None | ERR4817274 | Other | lineage4.9 | gb | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4816852 | Other | lineage4.9 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818232 | Other | lineage4.1.2 | gb | ERR2432997 | Other | lineage4.8 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2513259 | Other | lineage3 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4818561 | HR-TB | lineage4 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818952 | Other | lineage3 | None | ERR4818634 | Other | lineage4.6.1 | None | ERR2513686 | Sensitive | lineage4.2.2.2 | gb | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR4819314 | Other | lineage1.1.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819425 | Other | lineage3 | gb | ERR2514173 | Other | lineage4.5 | gb | ERR4819546 | HR-TB | lineage3 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819723 | Other | None | ERR2514576 | Other | lineage4.8 | gb | ERR2514613 | Other | lineage4.8 | gb | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4820130 | Other | lineage3 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4819933 | Other | lineage4.9 | None | ERR4820833 | HR-TB | None | ERR4820193 | Other | lineage3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821802 | Other | La3 | gb | SRR6045496 | Other | lineage6.1.3 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR4821288 | Other | lineage4.7 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821438 | Other | lineage3 | None | ERR4821519 | Other | lineage3 | gb | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821725 | Other | lineage4.8.2 | gb | SRR5818394 | Other | lineage4.9 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818385 | Other | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818391 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR5818396 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818406 | Other | lineage4.9 | None | SRR5818415 | Sensitive | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818436 | Sensitive | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818435 | Sensitive | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818441 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818455 | Sensitive | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818442 | Other | lineage4.9 | None | SRR5818466 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818463 | Sensitive | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR6045928 | Other | lineage4.9 | None | SRR6044904 | Other | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR6045255 | Sensitive | lineage4.1.2 | gb | SRR6045359 | Sensitive | lineage4.9 | None | ERR4829360 | Sensitive | lineage4.7 | None | ERR4830764 | RR-TB | lineage4.5 | ir | ERR4828962 | Other | lineage4.1.4 | it | SRR6046737 | Other | lineage4.9 | None | SRR6398019 | Sensitive | lineage4.1.2 | ca | SRR6046739 | Other | lineage1.1.2 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6982090 | RR-TB | lineage4.4.1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4972550 | MDR-TB | lineage4.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR7496471 | Sensitive | None | ERR3275190 | Other | lineage3 | nl | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR9971324 | MDR-TB | lineage2.2.2 | None | SRR7496523 | Other | lineage4.7 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR10796597 | Other | lineage4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3439441 | Other | La1.8.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4586795 | Other | La1.8.1 | None | ERR4769516 | Other | La1.3 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4797239 | Sensitive | lineage4.5 | in | ERR6197022 | Other | lineage4.9 | None | ERR5866420 | MDR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR11462861 | Other | La1.8.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR9117715 | Sensitive | lineage4.7 | None | ERR9117747 | HR-TB | lineage4.8 | None | SRR13180204 | Sensitive | lineage3 | None | SRR12199457 | Sensitive | lineage4.9;lineage1.1 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR16370694 | Sensitive | lineage4.1.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18213684 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13888750 | Other | La2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19233762 | Sensitive | lineage4.1.1 | None | SRR21469201 | Other | La1.7.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424884 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
