EBG00000313339 - n.2226A>G
Drug resistance types
15 Sensitive
4 RR-TB
20 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2.BCG | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1 | 5 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.5 | 1 |
| lineage4.9 | 13 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage4.1.1.3 | 3 |
| lineage3.1.1 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage4.8 | 2 |
| lineage6.1.3 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage4.3.4.1 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798262 | HR-TB | La1.2.BCG | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4816782 | Other | lineage4.1.2.1 | None | SRR1238558 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR11465777 | Sensitive | lineage4.1.1.3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR11465829 | Sensitive | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR4820484 | Sensitive | lineage4.8 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR11465776 | Sensitive | lineage4.1.1.3 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR1063866 | Sensitive | lineage4.3.3 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR11465830 | Sensitive | lineage4.9 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR11465581 | MDR-TB | lineage4.4.1.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None |
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