EBG00000313325 - n.303T>C
Drug resistance types
121 Sensitive
25 RR-TB
37 HR-TB
31 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
124 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 12 |
| lineage4.9 | 176 |
| lineage2.2.1 | 33 |
| lineage4.8 | 17 |
| lineage4.6.1.2 | 4 |
| lineage4.3.4.2.1 | 11 |
| lineage4.4.1.1 | 2 |
| lineage4.1.1.3 | 5 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.3.3 | 8 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1 | 12 |
| lineage6.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage3.1.1 | 2 |
| lineage4 | 2 |
| lineage4.5 | 1 |
| lineage1.2.2.2 | 3 |
| lineage5.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage2.2.2 | 5 |
| lineage4.4.2 | 2 |
| lineage4.3.2.1 | 5 |
| lineage1.1.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.2.1 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.6.2.2 | 3 |
| La1.8.1 | 1 |
| lineage4.6.5 | 2 |
| La1.3 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| La2 | 1 |
| lineage4.1.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage1.1.3.3 | 1 |
| lineage6.2.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3;lineage4 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 349 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819546 | HR-TB | lineage3 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR1208874 | Sensitive | lineage4.9 | None | SRR6280271 | Sensitive | lineage2.2.1 | cn | SRR1183179 | Other | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR4820484 | Sensitive | lineage4.8 | None | SRR6280286 | Sensitive | lineage2.2.1 | None | SRR1183610 | Other | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1208604 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1209020 | Sensitive | lineage4.9 | None | SRR1183395 | Other | lineage4.9 | None | SRR2101532 | Sensitive | lineage4.4.1.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1202379 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR3283008 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1208642 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1183674 | Other | lineage4.9 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR1183237 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1202622 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1181199 | Other | lineage4.9 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR6046141 | Other | lineage4.9 | None | SRR1208464 | Other | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR1208439 | Sensitive | lineage4.9 | None | SRR1209026 | Sensitive | lineage4.9 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1180538 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR1181190 | Sensitive | lineage4.9 | None | SRR1202405 | Sensitive | lineage4.9 | None | SRR1208761 | Other | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR16156291 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR4798823 | HR-TB | lineage4 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR10796624 | Other | lineage4.8 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR1208801 | Sensitive | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR751345 | Other | lineage5.1.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4820829 | Other | lineage4.8 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1208731 | Sensitive | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR6046376 | Other | lineage3 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR1183543 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1208576 | Sensitive | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1208283 | Sensitive | lineage4.9 | None | SRR1183290 | Other | lineage4.9 | None | SRR1182965 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR11465833 | Sensitive | lineage4.3.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1202425 | Sensitive | lineage4.9 | None | ERR4815517 | Other | lineage1.2.2.2 | None | SRR1208238 | Other | lineage4.9 | None | SRR1208785 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR10796573 | Other | lineage4.8 | None | ERR4821054 | Sensitive | lineage3 | None | SRR1208637 | Sensitive | lineage4.9 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR1208174 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR1208905 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1173770 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1208488 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342689 | Other | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1202557 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR1208261 | Sensitive | lineage4.9 | None | SRR1181189 | Other | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR4819910 | Sensitive | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SRR1208666 | Other | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR1183225 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR16157045 | Sensitive | lineage4.9 | None | SRR1202516 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1181403 | Other | lineage4.9 | None | SRR1208436 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR1208424 | Other | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR10796622 | Other | lineage4.8 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR7069158 | Other | lineage3 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180830 | Other | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | SRR1208406 | Sensitive | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR1208888 | Sensitive | lineage4.9 | None | SRR1183437 | Other | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR11462861 | Other | La1.8.1 | None | SRR1202523 | Sensitive | lineage4.9 | None | ERR11465777 | Sensitive | lineage4.1.1.3 | None | SRR6045832 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4820503 | Sensitive | lineage2.2.1 | None | ERR10796579 | Sensitive | lineage4.8 | None | ERR4769423 | Other | La1.3 | None | ERR176741 | Other | lineage4.9 | None | ERR10796621 | Other | lineage4.8 | None | SRR1208879 | Sensitive | lineage4.9 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1209087 | Sensitive | lineage4.9 | None | ERR10796634 | Other | lineage4.7 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1183621 | Other | lineage4.9 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | DRR184932 | Other | lineage2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1180717 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4817628 | Sensitive | lineage4.8 | gb | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1208794 | Sensitive | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | SRR1208741 | Other | lineage4.9 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR1208979 | Other | lineage4.9 | None | SRR1208824 | Other | lineage4.9 | None | SRR1183132 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR11465830 | Sensitive | lineage4.9 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR1208906 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR1208368 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | SRR1180061 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1183389 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4769436 | Other | La1.3 | None | SRR1180250 | Other | lineage4.9 | None | ERR4817194 | Sensitive | lineage4.1.2.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1183694 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1208233 | Other | lineage4.9 | None | ERR11465626 | Sensitive | lineage4.3.4.2.1 | None | ERR736831 | Other | lineage4.9 | None | SRR1208660 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1208990 | Sensitive | lineage4.9 | None | ERR5864362 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465829 | Sensitive | lineage4.9 | None | SRR1208412 | Sensitive | lineage4.9 | None | SRR1208563 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR4033549 | Other | lineage2.2.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1208546 | Other | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1182891 | Other | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1183485 | Other | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1208777 | Other | lineage4.9 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1208650 | Other | lineage4.9 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR11465627 | Sensitive | lineage4.3.4.2.1 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1208462 | Sensitive | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | ERR10796625 | Other | lineage4.4.1.1 | None | SRR7585400 | MDR-TB | lineage3 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR10796599 | Other | lineage4.8 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | DRR184629 | Other | lineage2.2.1 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR1208447 | Sensitive | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1208441 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR1208914 | Other | lineage4.9 | None | SRR1183364 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR1180612 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR10796563 | Other | lineage4.3.3 | None | SRR1202544 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR10796568 | Other | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1208676 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1182876 | Other | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | SRR1180803 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR1183098 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None |
|---|
