EBG00000313325 - n.303T>C
Drug resistance types
77 Sensitive
32 RR-TB
48 HR-TB
49 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
128 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 97 |
| lineage4.1.2.1 | 23 |
| lineage4;lineage2 | 1 |
| lineage4.8 | 29 |
| lineage4.6.1.2 | 6 |
| lineage4.1.2 | 4 |
| lineage2.2.2 | 6 |
| lineage4 | 21 |
| lineage4.3.4.2 | 1 |
| lineage3 | 20 |
| lineage4.6 | 2 |
| lineage2.2.1 | 47 |
| lineage6.3.1 | 1 |
| lineage4.3.3 | 6 |
| lineage1.1.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.6.2.2 | 6 |
| lineage4.4.1.1 | 6 |
| lineage1.1.3.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.8.2 | 1 |
| lineage4.3.1.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4;lineage3 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.3.4.1 | 2 |
| lineage2.2.1.1 | 2 |
| lineage4.6.1 | 1 |
| lineage4.3.2.1 | 2 |
| 6 | |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage4.2.1 | 2 |
| La1.8.1 | 3 |
| lineage3.1.1 | 2 |
| La1.3 | 4 |
| lineage1.1.3.3 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.3.2 | 1 |
| lineage1.2.2.2 | 3 |
| lineage5.1.1 | 1 |
| lineage4.6.5 | 2 |
| lineage1.1.1.1 | 1 |
| lineage6 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| La2 | 1 |
| lineage4.2.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage3.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.5 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 353 |
Geographic prevalence
Country level data for this variant is available for 30 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816729 | Sensitive | lineage4.9 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816758 | Other | lineage4.8 | gb | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4817294 | Other | lineage4.1.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR4033549 | HR-TB | lineage2.2.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817907 | Other | lineage3 | gb | ERR4817903 | Other | lineage4.1.2.1 | gb | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR2510807 | Other | lineage4.6 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818070 | Sensitive | lineage4.9 | None | ERR4818190 | Other | lineage4.8 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2515055 | Other | lineage3 | None | ERR4818853 | Other | lineage4.1.2 | gb | ERR4818904 | Other | lineage4.8 | None | ERR4818471 | Other | lineage2.2.1 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR6280271 | Sensitive | lineage2.2.1 | cn | ERR4818561 | HR-TB | lineage4 | None | ERR2513354 | Sensitive | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4817628 | Sensitive | lineage4.8 | gb | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR4819314 | Other | lineage1.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR6280286 | Sensitive | lineage2.2.1 | None | ERR4819553 | Other | lineage4.1.4 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4820334 | Other | lineage4.4.1.1 | gb | ERR4819462 | Other | lineage4 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4819734 | RR-TB | lineage3 | gb | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820484 | Other | lineage4.8 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820494 | Sensitive | lineage4.9 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819910 | Other | lineage4.9 | None | ERR4819955 | Other | lineage3 | None | ERR4820880 | Other | lineage4.2.2.2 | gb | ERR2517074 | Pre-XDR-TB | lineage3 | gb | ERR4820030 | Other | lineage4.9 | None | ERR2515093 | Other | lineage4.8.2 | gb | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4821799 | Other | lineage2.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821054 | Other | lineage3 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821635 | Other | lineage4.8 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045759 | RR-TB | lineage2.2.1 | gb | SRR6045064 | Other | lineage4.3.1.1 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6046385 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR4829124 | HR-TB | lineage4.6.2.2 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829904 | Other | lineage4.1.2.1 | it | SRR6046541 | Other | lineage4.9 | None | ERR4830743 | Pre-XDR-TB | lineage4.1.2 | dz | ERR4829873 | Sensitive | lineage4.4.1.1 | it | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4829623 | Sensitive | lineage4.8 | None | ERR4830701 | Other | lineage4;lineage3 | dz | SRR6046839 | Other | lineage4.9 | None | SRR6046641 | Other | lineage4.8 | None | ERR323037 | HR-TB | lineage4 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4831766 | HR-TB | lineage2.2.1 | vn | ERR4831717 | MDR-TB | lineage2.2.1 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR323035 | Sensitive | lineage4.9 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131071 | Sensitive | lineage4.1.2.1 | None | ERR5162122 | HR-TB | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971353 | MDR-TB | lineage2.2.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7535054 | Sensitive | lineage4.6.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR8791320 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | DRR185048 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796573 | Other | lineage4.8 | None | ERR10796590 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796579 | Sensitive | lineage4.8 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796597 | Other | lineage4 | None | ERR10796599 | Other | lineage4 | None | ERR10796621 | Other | lineage4.8 | None | ERR10796624 | Other | lineage4.8 | None | ERR10796622 | Other | lineage4.8 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796630 | HR-TB | None | ERR10796628 | Other | lineage4.3.3 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR10796634 | Other | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3468601 | HR-TB | La1.8.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4796257 | Pre-XDR-TB | lineage2.2.1 | in | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769516 | Other | La1.3 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4769423 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797141 | Sensitive | lineage3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR5864362 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359066 | HR-TB | lineage4 | None | ERR5908124 | Other | lineage4.8 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197036 | Other | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR846990 | Sensitive | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9119120 | Other | lineage4.8 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9787336 | Other | lineage6 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10272564 | Sensitive | lineage4.4.1.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11342690 | Sensitive | lineage4.1.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140736 | RR-TB | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180972 | MDR-TB | lineage2.2.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180999 | Sensitive | lineage4.8 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972182 | MDR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16149133 | MDR-TB | lineage4.2.2.1 | None | SRR18002949 | Sensitive | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156291 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16157045 | Sensitive | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR2101532 | Sensitive | lineage4.4.1.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4815427 | HR-TB | lineage3.1 | gb | ERR4815172 | Other | lineage1.2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4814371 | Sensitive | lineage4.9 | None | SRR3105762 | HR-TB | None | ERR4815419 | Other | lineage4.8 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR4812771 | RR-TB | lineage2.2.1 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4814610 | Sensitive | lineage3 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815099 | Sensitive | lineage3 | None | ERR4814932 | Other | lineage4.1.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | SRR6280216 | RR-TB | lineage2.2.2 | cn | ERR4815870 | HR-TB | lineage4.6.2.2 | gb | SRR3732711 | MDR-TB | lineage4.1.2.1 | None | ERR2027304 | Sensitive | lineage4.1.2.1 | None | SRR6280270 | Sensitive | lineage2.2.1 | cn | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816545 | Other | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817182 | Other | lineage4.7 | None |
|---|
