EBG00000313339 - n.1144G>A
Drug resistance types
54 Sensitive
22 RR-TB
16 HR-TB
32 MDR-TB
15 Pre-XDR-TB
1 XDR-TB
140 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 1 |
| lineage4.1.1.3 | 7 |
| lineage4 | 9 |
| lineage4.9 | 34 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2.1 | 2 |
| 10 | |
| lineage4.4.1.1 | 13 |
| lineage2.2.1 | 40 |
| lineage2.2.1.1 | 3 |
| lineage5.1.1 | 1 |
| La1.8.1 | 4 |
| lineage4.3.4.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.4.2 | 2 |
| lineage2.2.2 | 3 |
| lineage4.1.2.1 | 14 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.1.1 | 4 |
| lineage4.3.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4;La1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage4.8 | 10 |
| La1.3 | 3 |
| La1.2 | 1 |
| lineage4.6 | 4 |
| lineage1.2.2.2 | 6 |
| lineage4.2.2.2 | 6 |
| lineage3 | 26 |
| lineage3.1.1 | 10 |
| lineage4.3 | 1 |
| lineage4.3.1.1 | 5 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2 | 4 |
| lineage4.6.1.2 | 5 |
| lineage4.3.3 | 5 |
| lineage4.8.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.5 | 1 |
| lineage4.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6 | 1 |
| lineage1.1.2 | 4 |
| lineage4.7 | 3 |
| lineage1.2.1.1 | 2 |
| lineage3.1 | 1 |
| lineage4;lineage3 | 1 |
| lineage3.1.2 | 3 |
| lineage3.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.2.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 280 |
Geographic prevalence
Country level data for this variant is available for 22 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6981912 | Sensitive | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982070 | RR-TB | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5162108 | Other | La1.8.1 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR9971035 | RR-TB | lineage2.2.1 | None | SRR7131026 | Other | lineage2.2.1 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | DRR184903 | Sensitive | lineage2.2.2 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796557 | Other | lineage4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796595 | Other | lineage4.9 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3283053 | Other | lineage4.9 | None | ERR144568 | Pre-XDR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR4187921 | Other | None | ERR4187641 | Other | lineage4;La1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4195286 | Sensitive | lineage4.8 | None | ERR4586795 | Other | La1.8.1 | None | ERR4769472 | Other | lineage4.9 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769503 | Other | La1.2 | None | ERR4769495 | Other | La1.3 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR4769546 | Other | La1.3 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR6197022 | Other | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR9117704 | Other | lineage4.6 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR9117729 | Other | lineage3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117763 | HR-TB | lineage3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR9117780 | Other | lineage4.1.2.1 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR9117788 | Other | lineage3 | None | ERR9117806 | Other | lineage4.8 | None | ERR9121775 | Sensitive | lineage4.8 | None | ERR9786810 | Sensitive | lineage4.1.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315714 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR11349179 | MDR-TB | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002902 | Other | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002899 | RR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002929 | HR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002985 | HR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003020 | Sensitive | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18149443 | Sensitive | lineage3 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR21595825 | Other | lineage1.2.1.2.1 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR19158679 | Sensitive | lineage4.4.1.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303985 | Other | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22424743 | Pre-XDR-TB | lineage1.1.2 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR3675491 | Other | lineage4.7 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR3675474 | Other | lineage4.1.1 | None | ERR3275321 | Sensitive | lineage3.1.1 | nl | SRR3675276 | Other | lineage4.1.2.1 | gb | SRR3675496 | Other | lineage4.1.1.3 | gb | SRR3675261 | Other | lineage1.2.1.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675511 | Sensitive | lineage4.6 | None | SRR3675288 | Other | lineage3 | None | SRR3675291 | Sensitive | lineage4.6 | gb | ERR2446580 | Sensitive | lineage3.1.1 | nl | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR4816619 | Sensitive | lineage3 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | SRR5007186 | Other | lineage4.6 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR6046087 | Other | None | ERR4820484 | Other | lineage4.8 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045445 | Other | lineage4.3.1.1 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6046113 | Other | lineage4.1.1.3 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818624 | Sensitive | lineage3 | None | SRR6045743 | Other | lineage3 | None | SRR5818622 | Sensitive | lineage4.2.2.2 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818572 | Sensitive | lineage4.2.2.2 | None | SRR6045749 | Other | lineage4.1.1 | gb | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR5818669 | Sensitive | lineage1.2.2.2 | None | SRR5818667 | Sensitive | lineage4.4.1.1 | dj | SRR6045843 | Other | lineage4.2.2.2 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045876 | Other | lineage3 | gb | SRR6045894 | Other | lineage4.8 | None | SRR6044872 | Sensitive | lineage3.1.2.1 | None | SRR6044904 | Other | lineage3 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044993 | Other | lineage3 | None | SRR6044978 | Sensitive | lineage4.1.1.3.1 | gb | SRR6045024 | Other | lineage4.1.1.2 | None | SRR6046208 | Other | lineage4 | None | SRR6045119 | Other | lineage3 | gb | SRR6046177 | Other | lineage3.1.2 | None | SRR6046020 | Other | lineage3 | None | SRR6045178 | Other | lineage3 | None | SRR6045110 | Other | lineage3 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6045289 | Other | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045376 | HR-TB | lineage4.1.2.1 | gb | SRR6045384 | Other | lineage4.1.2 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046607 | Other | lineage3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046447 | Sensitive | lineage4.8 | gb | SRR6046457 | Other | lineage3 | gb | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046668 | Sensitive | lineage1.1.2 | gb | SRR6046679 | Other | lineage3 | gb | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046729 | Other | None | SRR6046743 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046766 | Other | lineage3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046824 | HR-TB | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6397642 | RR-TB | None | SRR6398019 | Sensitive | lineage4.1.2 | ca | SRR6397770 | Other | lineage4.7 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | SRR6398013 | Other | lineage4.1.2 | ca | SRR6982115 | Sensitive | lineage4 | None | SRR6785211 | HR-TB | lineage2.2.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2 | None |
|---|
