EBG00000313339 - n.2249C>T
Drug resistance types
90 Sensitive
87 RR-TB
56 HR-TB
66 MDR-TB
41 Pre-XDR-TB
1 XDR-TB
360 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 5 |
| lineage4.3.2 | 6 |
| lineage4.1.2.1 | 54 |
| lineage4.4.1.1 | 21 |
| lineage4;La1.3 | 1 |
| lineage3.1.1 | 17 |
| lineage4.9 | 80 |
| La1.2 | 4 |
| La1.3 | 5 |
| lineage4.9;La1.3 | 1 |
| lineage2.2.1 | 86 |
| lineage4.4.2 | 4 |
| lineage4.3.3 | 24 |
| lineage4.7;lineage4.3.4.2 | 1 |
| lineage4 | 22 |
| lineage4.7 | 6 |
| lineage4.3.4.2 | 5 |
| lineage1.2.2.2 | 7 |
| lineage4.2.2.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.2.2.2 | 10 |
| lineage4.6 | 2 |
| lineage4.1.1 | 10 |
| lineage4.3 | 2 |
| lineage4.8 | 57 |
| lineage3 | 60 |
| lineage3.1.3 | 4 |
| lineage4.8.2 | 4 |
| lineage4.3.1.1 | 6 |
| lineage2.2 | 7 |
| lineage1.2.2.1 | 4 |
| lineage2.2.1.1 | 10 |
| lineage4.3.2.1 | 6 |
| 16 | |
| lineage2.2.2 | 15 |
| lineage4.1.2 | 9 |
| lineage4.4.1.1.1 | 4 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 8 |
| lineage4.8.1 | 1 |
| lineage1.2.1.2.1 | 5 |
| lineage4.2.1 | 3 |
| lineage1.1.2 | 12 |
| La1.4 | 1 |
| lineage4.2.2 | 1 |
| lineage4.1.1.3 | 13 |
| lineage4.4.1.2 | 3 |
| lineage6 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.1 | 2 |
| lineage3.1.2.1 | 4 |
| lineage1.2.2 | 1 |
| lineage3.1.2 | 4 |
| lineage1.1.3.1 | 5 |
| lineage4.6.5 | 2 |
| lineage4.1 | 3 |
| lineage1.2.1.1 | 2 |
| lineage5 | 2 |
| lineage3.1 | 2 |
| lineage4.6.1.2 | 1 |
| lineage6.2.3 | 1 |
| lineage4.6.2.2 | 4 |
| lineage4.3.4.1 | 9 |
| lineage1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.1.3.1 | 5 |
| lineage4;lineage3 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.4 | 2 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| La3 | 1 |
| lineage6.1.3 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.1.2 | 2 |
| lineage3.1.2.2 | 4 |
| lineage4.3.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.3.4 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 701 |
Geographic prevalence
Country level data for this variant is available for 31 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797060 | Other | La1.8.1 | None | ERR4586795 | Other | La1.8.1 | None | ERR3957925 | Sensitive | lineage4.3.2 | None | ERR4024892 | Sensitive | lineage4.1.2.1 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR4769410 | Other | lineage4;La1.3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4627369 | Other | La1.8.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4772206 | Other | La1.2 | None | ERR4769517 | Other | La1.3 | None | ERR4772201 | Other | La1.3 | None | ERR5864556 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR5865032 | MDR-TB | lineage4.3.3 | None | ERR5865953 | MDR-TB | lineage2.2.1 | None | ERR6197022 | Other | lineage4.9 | None | ERR5866312 | Pre-XDR-TB | lineage2.2.1 | None | ERR5908229 | Sensitive | lineage4.3.3 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197021 | MDR-TB | lineage4.7;lineage4.3.4.2 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6197034 | Other | lineage4.9 | None | ERR6197033 | Other | lineage4.7 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR6720545 | Sensitive | lineage2.2.1 | None | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR6865855 | Sensitive | lineage4.1.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR909753 | Other | lineage5.1.1 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117763 | HR-TB | lineage3 | None | ERR9117781 | Other | lineage3.1.3 | None | ERR9117759 | Other | lineage3 | None | ERR9117771 | Sensitive | lineage4.8.2 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117788 | Other | lineage3 | None | ERR9811805 | MDR-TB | lineage4.8 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9119101 | Sensitive | lineage4.3.3 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013599 | HR-TB | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR10272567 | Sensitive | lineage4.3.3 | None | SRR10272569 | Sensitive | lineage4.4.1.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR10315693 | RR-TB | lineage4.1.2 | None | SRR10315696 | Sensitive | lineage4.3.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048983 | HR-TB | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR11342643 | MDR-TB | lineage4.1.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR11349153 | RR-TB | lineage4.1.1 | None | SRR11349159 | MDR-TB | lineage2.2.2 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR11567803 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR1181161 | Other | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | SRR12006699 | Sensitive | lineage1.2.1.2.1 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | SRR12882160 | MDR-TB | lineage3 | None | SRR13199734 | Other | La1.2 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR13583369 | MDR-TB | lineage4.1.2 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR15399219 | HR-TB | lineage4.3.4.2 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR16278274 | Other | La1.4 | None | SRR16058050 | Sensitive | lineage1.2.1.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002886 | MDR-TB | lineage2.2.1 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002926 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002961 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18002988 | MDR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18715102 | MDR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18213726 | Other | lineage3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR19303792 | Sensitive | lineage4.1.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19304057 | Sensitive | lineage4.4.1.2 | None | SRR19304094 | Other | lineage6 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR19325518 | MDR-TB | lineage2.2.1 | None | SRR19325559 | Sensitive | lineage4.3.2 | None | SRR22048536 | Other | lineage4.3.3 | None | SRR22048484 | Sensitive | lineage4.8 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR22175232 | MDR-TB | lineage3.1.2.1 | None | ERR4815104 | Other | lineage4.8 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR1723899 | Sensitive | lineage4.5 | cn | SRR5341295 | Sensitive | lineage1.2.2.2 | in | SRR3675475 | Other | lineage4.1.1.3 | None | SRR3675474 | Other | lineage4.1.1 | None | SRR305201 | Sensitive | lineage4.9 | None | ERR4815613 | Other | lineage3 | None | SRR3082067 | Sensitive | lineage4.8 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815278 | Other | lineage4.8 | None | ERR4815257 | HR-TB | lineage4.4.1.1 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | SRR3085326 | Sensitive | lineage4.8 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR4814312 | Other | lineage4 | None | SRR6046064 | Other | lineage3 | gb | SRR6046668 | Sensitive | lineage1.1.2 | gb | ERR2229733 | Other | lineage4.8 | dk | ERR4814362 | Other | lineage4.8 | None | ERR4814610 | Sensitive | lineage3 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814415 | Other | lineage3.1.1 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR6046679 | Sensitive | lineage3 | gb | SRR6045056 | Other | lineage2.2.1 | gb | ERR4814584 | Sensitive | lineage4.4.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814623 | Other | lineage4.8 | None | SRR3675251 | Other | lineage4.3.3 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | ERR4814697 | Sensitive | lineage4.4.1.1 | None | ERR4814714 | Other | lineage3 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4814821 | Other | lineage2.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815534 | Other | lineage4 | None | ERR4815577 | Other | lineage3.1.3 | None | ERR4815849 | Other | lineage3.1.1 | None | ERR4815901 | Other | lineage2.2 | None | ERR2229541 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR4815898 | Other | lineage3 | None | ERR4815919 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4815944 | HR-TB | lineage4.1.2.1 | None | ERR4815956 | Other | lineage1.1.2 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816982 | Other | lineage4 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR4816184 | Other | lineage4.1.2.1 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817055 | Other | lineage4.1.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR3675565 | Other | lineage3 | None | ERR4817060 | RR-TB | None | SRR3675558 | HR-TB | None | ERR4816397 | Other | lineage1.1.2 | None | ERR2229147 | Other | lineage4.8 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR4816608 | Other | lineage2.2.1 | None | ERR4816403 | Other | lineage6.2.3 | None | ERR4816417 | Other | lineage4.9 | None | ERR4817110 | Other | lineage4.1.1.3 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR2229204 | Other | lineage4.8 | None | ERR2229228 | HR-TB | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | ERR4816627 | Other | lineage2.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR2229366 | Other | lineage4.8 | None | ERR4816703 | Sensitive | lineage4.5 | None | ERR4816677 | Other | lineage4.5 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR2229691 | Sensitive | lineage4.8 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4816756 | RR-TB | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR4817497 | Other | lineage1.1.2 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | ERR2229804 | Other | lineage4 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR2228890 | Other | lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4817703 | Other | lineage1.1.1 | None | ERR3275321 | Sensitive | lineage3.1.1 | nl | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817803 | Other | lineage4.2.2.2 | None | ERR2512986 | Other | lineage3 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR718546 | Sensitive | lineage4.5 | th | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4817917 | Other | lineage2.2.1 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR2513401 | HR-TB | lineage3 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818065 | Other | lineage4.1.2.1 | None | ERR4818797 | Other | lineage4.5 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4818810 | Other | lineage2.2.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818831 | Other | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR2513231 | RR-TB | lineage4.3.4.2 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818370 | Other | lineage4.1.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818556 | Other | lineage3 | None | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818440 | Other | lineage6.3.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007178 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4817568 | Other | lineage4.1.2.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819140 | Other | lineage4.1.2.1 | None | ERR4817569 | Other | lineage4.3.4.1 | None | ERR4819203 | RR-TB | lineage1.2.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820266 | RR-TB | lineage3 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR2513924 | RR-TB | lineage4.8 | None | SRR5153833 | Other | lineage2.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820324 | Other | lineage4 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4819503 | Other | lineage3 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR2514261 | Other | lineage3 | None | ERR4819593 | Other | lineage4.5 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4820397 | Other | lineage4.9 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | ERR4819553 | Other | lineage4.1.4 | None | SRR6397443 | Sensitive | lineage3.1.1 | ca | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR2514533 | Other | lineage4.9 | None | ERR4819765 | Other | lineage4.1 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | ERR4820777 | Other | lineage4.1.2.1 | None | ERR4820484 | Other | lineage4.8 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SRR6152838 | Other | lineage2.2.1.1 | ca | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514692 | Other | None | ERR4820492 | Other | lineage2.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | ERR2514834 | Other | lineage4.7 | None | ERR2515022 | Sensitive | lineage3 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR4820005 | Sensitive | lineage3 | None | ERR4820829 | Other | lineage4.8 | None | ERR4820073 | Sensitive | lineage4.9 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR4820833 | HR-TB | None | ERR4820026 | Other | lineage3 | None | ERR4820107 | RR-TB | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820193 | Other | lineage3 | None | ERR4820194 | Other | La3 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821054 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR3675291 | Sensitive | lineage4.6 | gb | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6045485 | Other | lineage4.9 | None | SRR6046096 | Other | lineage4.1.2.1 | None | ERR4821861 | Other | lineage4.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR270777 | HR-TB | lineage4.1.2 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821288 | Other | lineage4.7 | None | ERR4821372 | Other | lineage4.1.2.1 | None | ERR4821302 | Sensitive | lineage5.1.4 | None | ERR4821310 | Other | lineage5 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR2446580 | Sensitive | lineage3.1.1 | nl | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821360 | Other | lineage4.1.2.1 | None | ERR4821477 | Other | lineage4.8 | None | ERR4821409 | Other | lineage4.8 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4821551 | Sensitive | lineage4.9 | None | ERR4821564 | Sensitive | lineage4.2.2.2 | None | ERR4822176 | Other | lineage4.1.1.2 | None | SRR6046115 | Sensitive | lineage3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR5818388 | Other | lineage4.9 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045705 | Other | lineage4.9 | None | SRR6045743 | Other | lineage3 | None | SRR6045726 | Other | lineage3 | None | SRR5818624 | Sensitive | lineage3 | None | SRR6045778 | Other | lineage3.1 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR5818685 | Sensitive | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6044774 | Other | lineage3 | None | SRR6044817 | Other | lineage3 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6044904 | Other | lineage3 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6044993 | Other | lineage3 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045110 | Other | lineage3 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046159 | Other | lineage4.8.2 | None | SRR6046173 | Other | lineage3 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6046020 | Other | lineage3 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6046208 | Other | lineage4 | None | SRR6045178 | Other | lineage3 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6045263 | Sensitive | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6046050 | Other | lineage4.3.3 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046291 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR2179662 | Sensitive | lineage4.5 | cn | ERR4829208 | RR-TB | lineage4.8 | None | ERR4829213 | Sensitive | lineage4.3.4.2 | None | ERR4798451 | Sensitive | lineage4.1.2.1 | in | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046433 | Other | lineage3 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046442 | Other | lineage3 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046729 | Other | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046743 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR6046907 | Other | lineage4.9 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR4814905 | Sensitive | lineage4.8 | gb | ERR4816569 | Sensitive | lineage4.3.3 | gb | SRR6397815 | Other | lineage4.4.1.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR502470 | RR-TB | lineage4.9 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | ERR11465777 | Sensitive | lineage4.1.1.3 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR7131004 | Other | lineage4.6.2.2 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR5311092 | Other | La1.8.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131032 | Other | lineage2.2.1 | None | SRR7131019 | Sensitive | lineage4.3.4.2 | None | SRR7131030 | Other | lineage4.1.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7517713 | MDR-TB | lineage3 | None | SRR7131152 | MDR-TB | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR11465830 | Sensitive | lineage4.9 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR9971372 | MDR-TB | lineage4.1.1 | None | SRR7517755 | HR-TB | lineage1.2.1.2.1 | None | SRR7517817 | MDR-TB | lineage2.2.1 | None | SRR9971032 | RR-TB | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | SRR9971068 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971144 | RR-TB | lineage2.2.1 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9971185 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR9971201 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971197 | MDR-TB | lineage4.4.1.1.1 | None | SRR9971200 | MDR-TB | lineage4.3.2 | None | SRR7851312 | Other | La1.2 | None | SRR9971230 | Pre-XDR-TB | lineage4.3.3 | None | DRR184903 | Sensitive | lineage2.2.2 | None | DRR034348 | Other | lineage2.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR019855 | Other | lineage3 | None | ERR11465581 | MDR-TB | lineage4.4.1.1 | None | ERR017781 | Other | lineage3 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796574 | Other | lineage4.9 | None | ERR10796573 | Other | lineage4.8 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796586 | Other | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796611 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796599 | Other | lineage4 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796615 | Other | lineage4 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796624 | Other | lineage4.8 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796622 | Other | lineage4.8 | None | ERR10796630 | HR-TB | None | ERR10796627 | Other | lineage4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796634 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796635 | Other | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR4821718 | Sensitive | lineage4.2.2.2 | gb | ERR11465776 | Sensitive | lineage4.1.1.3 | None | ERR11465829 | Sensitive | lineage4.9 | None | ERR10796640 | Other | lineage4.1.2.1 | None | ERR4821519 | Other | lineage3 | gb | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3283041 | Other | lineage4.9 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3439277 | Sensitive | lineage4.9 | None |
|---|
