EBG00000313325 - n.1244A>T
Drug resistance types
19 Sensitive
23 RR-TB
3 HR-TB
11 MDR-TB
10 Pre-XDR-TB
1 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9.1 | 1 |
| lineage4.9 | 25 |
| lineage3 | 6 |
| lineage4.8 | 10 |
| lineage2.2.1 | 10 |
| lineage4.4.2 | 2 |
| La1.3 | 5 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 1 |
| 1 | |
| lineage4.1.1.3 | 4 |
| lineage4.3.4.1 | 3 |
| lineage4.6.2.2 | 1 |
| lineage2.2.2 | 3 |
| lineage2.2;lineage4 | 1 |
| lineage4.2.1 | 3 |
| lineage2.2.1.1 | 3 |
| La2 | 1 |
| La3;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage3.1.1 | 3 |
| lineage1.1.3.1 | 1 |
| La1.8.1 | 3 |
| lineage4.3.3 | 3 |
| lineage4.1.1.2 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 107 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR216928 | Other | lineage4.9.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR1175474 | Other | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR6789628 | Sensitive | lineage4.9 | None | ERR4821550 | Sensitive | lineage2.2.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR4769517 | Other | La1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR4817069 | RR-TB | None | SRR22424765 | HR-TB | lineage4.8 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR11465776 | Sensitive | lineage4.1.1.3 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4769453 | Other | La1.3 | None | ERR4816702 | Other | lineage4.6.2.2 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR4769423 | Other | La1.3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR11465487 | Sensitive | lineage4.1.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR7236330 | Other | La1.8.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR4820484 | Sensitive | lineage4.8 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7069473 | Other | lineage4.1.1.2 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR4816800 | Other | lineage4.8 | gb | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | ERR4769419 | Sensitive | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | SRR7617847 | Other | La1.8.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR3283032 | Other | lineage4.9 | None | ERR11465830 | Sensitive | lineage4.9 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4812763 | Other | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4769495 | Other | La1.3 | None | ERR9787000 | Sensitive | lineage4.1.2.1 | None | SRR7236399 | Other | La1.8.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | ERR11465829 | Sensitive | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR4820586 | Other | lineage3 | gb | SRR6044952 | Other | lineage4.9 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR11465777 | Sensitive | lineage4.1.1.3 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR3077969 | Other | La1.3 | None | ERR2229234 | Sensitive | lineage4.8 | None | ERR4816569 | Sensitive | lineage4.3.3 | gb | ERR4815550 | Other | lineage2.2;lineage4.9 | None |
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