EBG00000313325 - n.738T>A
Drug resistance types
41 Sensitive
3 RR-TB
52 HR-TB
26 MDR-TB
30 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage2.2 | 1 |
| lineage4.9 | 41 |
| lineage2.2.1 | 35 |
| lineage4 | 5 |
| lineage4.1.1.3 | 3 |
| lineage4.3.3 | 3 |
| La1.8.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| La1.3 | 3 |
| lineage3.1.1 | 2 |
| La1.2 | 1 |
| lineage4.4.2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage2.2 | 19 |
| lineage3 | 6 |
| 11 | |
| lineage2.2.1.1 | 2 |
| lineage2.2.2 | 14 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 2 |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1;lineage3.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 3 |
| lineage4.2.1 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 172 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4831633 | RR-TB | lineage4.9;lineage2.2 | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR6832359 | Sensitive | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR4831631 | HR-TB | lineage4.9 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR5162126 | Sensitive | lineage4.9 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3439235 | Sensitive | lineage4.9 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR3797078 | Sensitive | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | ERR4188158 | Other | lineage4.9 | None | ERR4769453 | Other | La1.3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR4769478 | Other | La1.2 | None | ERR4769516 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013599 | HR-TB | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013598 | HR-TB | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013618 | MDR-TB | None | SRR1013617 | MDR-TB | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048982 | HR-TB | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048983 | HR-TB | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1049041 | MDR-TB | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173720 | Other | lineage4.9 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1188087 | Sensitive | lineage4.1.2 | ca | SRR1173833 | Other | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR16156188 | HR-TB | lineage4.9 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR6207283 | Sensitive | lineage4.3.3 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | ERR4814573 | Other | lineage1.1.3.2 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4816571 | Other | lineage1.1.2 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR8380864 | Other | lineage2.2.1.2 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SRR5074710 | Sensitive | lineage4.3.3 | None | ERR4818597 | Sensitive | lineage3 | gb | SAMN02360580 | HR-TB | lineage2.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4820484 | Other | lineage4.8 | None | ERR4820845 | MDR-TB | lineage4.8 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR2747615 | Sensitive | lineage4.9 | None | ERR2747620 | Sensitive | lineage4.9 | None | ERR2747622 | Sensitive | lineage4.9 | None | SRR6045162 | Sensitive | lineage4.9 | None |
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