EBG00000313325 - n.1357C>T


Drug resistance types
115 Sensitive 14 RR-TB 24 HR-TB 38 MDR-TB 23 Pre-XDR-TB 0 XDR-TB 83 Other
lineage Counts
lineage Count
lineage4.7 2
lineage1.1.3.2 1
lineage4.5 6
lineage4.1.2.1 12
lineage4.9;lineage4.3 1
lineage4.4.1 1
lineage4.8 11
lineage1.2.2.2 4
lineage4.9 72
lineage4.2.2.2 2
lineage4 11
8
lineage2.2.1 35
lineage1.1.2 13
lineage2.2.2 3
lineage4.6.1.1 6
lineage1.1.3.1 2
lineage4.6.2.2 1
lineage4.1.1.3 10
lineage4.3.4.1 3
lineage3 26
lineage4.6.3 1
lineage4.3.2 2
lineage1.1.1 1
lineage4.1.1.3.1 1
lineage5.2 1
lineage2.2.1.1 4
lineage4.3.4.2 2
La1.8.1 5
lineage4.4.1.1 6
lineage4.1.1 1
lineage3.1.2.2 1
lineage3.1.1 4
lineage4.1 2
lineage4.2.1.1 2
lineage4.3.4.2.1 2
lineage4.3.3 5
lineage4.1.2 3
lineage4.6.1.2 1
lineage4.4.1.1.1 1
lineage4.2.1;lineage2.2.1 1
lineage4.2.1 3
lineage3.1.3 1
lineage4.9.1 1
lineage4;lineage3.1 1
lineage4.9;La1.8.1 1
La1.3 4
lineage4.4.2 1
lineage5.1.1 1
lineage2.2 2
lineage4.9;lineage4.2.1 1
lineage3.1.2.1 1
lineage3;lineage2.2 2
lineage1.2.1.2.1 1
lineage1.2.1.2 1
spoligotype Counts
spoligotype Count
None 297
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4814597 Other lineage4.7 None
ERR4814573 Other lineage1.1.3.2 None
SRR6824490 RR-TB lineage4.5 cn
SRR6824491 RR-TB lineage4.5 cn
SRR3675245 Other lineage4.1.2.1 None
ERR164004 Sensitive lineage4.9;lineage4.3 None
ERR4815488 HR-TB lineage4.4.1 None
ERR4814623 Other lineage4.8 None
ERR4815517 Other lineage1.2.2.2 None
SRR3675284 HR-TB lineage4.9 None
ERR4815040 Other lineage4.2.2.2 None
ERR4816982 Other lineage4 None
SRR3675456 HR-TB None
SAMN02599073 Sensitive lineage2.2.1 None
ERR4817070 Other lineage1.1.2 None
ERR2027233 RR-TB lineage4.1.2.1 None
SAMN02598990 Sensitive lineage1.1.2 None
SRR3675555 HR-TB None
ERR4816231 Other lineage4 None
SAMN02599067 Sensitive lineage2.2.1 None
SAMN02403473 Pre-XDR-TB lineage2.2.2 None
SAMN02567670 Sensitive lineage4.6.1.1 None
SAMN02599052 Sensitive lineage2.2.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816417 Other lineage4.9 None
ERR4816454 Sensitive lineage1.1.3.1 None
SAMN02567685 Pre-XDR-TB lineage2.2.1 None
ERR4816571 Other lineage1.1.2 None
SRR3743190 Sensitive lineage4.1.2.1 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816833 Other lineage4.1.1.3 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SAMN02599089 MDR-TB lineage3 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4817817 Sensitive lineage3 None
SAMN02599130 MDR-TB lineage3 None
ERR2510736 Other lineage4.1.2.1 None
ERR4818752 Other lineage3 None
ERR2446413 Sensitive lineage4.6.3 None
SAMN02599072 Sensitive lineage2.2.1 None
SAMN02599091 Sensitive lineage1.2.2.2 None
SRR1723829 Sensitive lineage2.2.1 None
ERR4818845 Sensitive lineage4.9 None
ERR2513223 Other lineage4.1.2.1 None
SAMN02599017 Sensitive lineage2.2.1 None
ERR4818272 Other lineage4.3.2 None
ERR245790 Sensitive None
ERR2513273 Other lineage4.1.2.1 None
ERR1035138 MDR-TB None
ERR4817554 Other lineage1.1.1 None
SRR5152926 MDR-TB lineage2.2.1 None
ERR2514073 Other lineage4.1.1.3.1 None
SAMN02599071 Sensitive lineage3 None
SRR5152904 Other lineage2.2.1 None
ERR2706950 MDR-TB lineage5.2 cd
ERR4820484 Other lineage4.8 None
SRR6152838 Other lineage2.2.1.1 ca
ERR1023509 Other None
ERR4821054 Other lineage3 None
ERR4820923 Other lineage4.3.4.2 None
ERR4820161 Other lineage3 None
SRR5341346 Sensitive lineage3 None
ERR4821769 Other lineage4.1.2.1 None
ERR4821811 RR-TB lineage4.9 None
ERR2747678 Other La1.8.1 None
ERR4821057 HR-TB lineage4 None
SRR6045450 Other lineage4.9 None
ERR4821119 Other lineage4.4.1.1 None
ERR4821143 RR-TB lineage4.9 None
ERR2747617 Other La1.8.1 None
ERR4821492 HR-TB lineage3 None
ERR4822033 Other lineage3 None
ERR4822043 Other lineage4.1.1 None
ERR2747685 Other La1.8.1 None
SRR6045124 Other lineage4.9 None
ERR4822138 Other lineage4.1.2.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR6045642 Other lineage3.1.2.2 None
SRR6046152 Other lineage4.9 None
SRR6045162 Sensitive lineage4.9 None
SRR6045159 Other lineage3.1.1 None
SRR6046250 Other lineage4.9 None
SRR6046737 Other lineage4.9 None
ERR2179662 Sensitive lineage4.5 cn
ERR4828420 Sensitive lineage2.2.1 None
SRR6896147 Sensitive lineage4.8 None
SRR6367397 Other lineage4.1.2.1 None
SRR6257038 HR-TB lineage4.1 None
ERR4814905 Sensitive lineage4.8 gb
ERR502470 RR-TB lineage4.9 None
SRR6397640 Other lineage4.2.1.1 None
SRR6896576 Other lineage2.2.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
ERR11465777 Sensitive lineage4.1.1.3 None
SRR6855896 Other lineage4.3.4.2.1 None
SRR6982246 Sensitive lineage4 None
SRR6832644 Other lineage4.3.3 None
ERR4831863 HR-TB lineage2.2.1.1 None
DRR474071 Sensitive lineage4.5 None
SRR7131047 MDR-TB lineage4.3.3 None
ERR502942 Sensitive lineage4.9 None
SRR7131114 Other lineage4.1.2 None
SRR9971296 MDR-TB lineage4.8 None
SRR7535053 Sensitive lineage3 None
ERR11465830 Sensitive lineage4.9 None
SRR8217918 HR-TB None
SRR7535074 Sensitive lineage3 None
SRR7535077 MDR-TB lineage4.6.1.2 None
SRR7535079 Sensitive lineage4.6.1.1 None
SRR7535073 Sensitive lineage4.6.1.1 None
SRR7645853 MDR-TB lineage2.2.1 None
SRR7535081 Sensitive lineage4.6.1.1 None
SRR7535080 HR-TB lineage4.8 None
SRR7645856 Sensitive lineage4.4.1.1 None
SRR7535082 Sensitive lineage4 None
SRR8600288 Other La1.8.1 None
SRR9971026 Sensitive lineage4.4.1.1.1 None
ERR323057 Sensitive lineage4.9 None
SRR7646056 Other lineage4.2.1.1 None
SRR7755705 MDR-TB lineage4.2.1;lineage2.2.1 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR7755706 MDR-TB lineage4.2.1 None
SRR7829582 Pre-XDR-TB lineage4.1.2.1 None
ERR323067 Sensitive lineage4.3.4.2.1 None
ERR11465579 Sensitive lineage4.3.4.1 None
ERR023742 Sensitive lineage3.1.3 None
ERR025888 Sensitive lineage4 None
ERR037235 Sensitive lineage4.9 None
ERR3439235 Sensitive lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796632 Other lineage4.3.3 None
ERR4821718 Sensitive lineage4.2.2.2 gb
ERR11465776 Sensitive lineage4.1.1.3 None
ERR3283033 Sensitive lineage4.9 None
ERR4819175 Other lineage4.1.1.3 gb
ERR10796574 Other lineage4.9 None
ERR10796619 Other lineage4.3.3 None
ERR11465490 Sensitive lineage4.1.2.1 None
ERR4821519 Other lineage3 gb
ERR126611 Sensitive lineage4.9.1 None
ERR3283034 Sensitive lineage4.9 None
ERR4821962 Other lineage4.1.1.3 gb
ERR405217 Sensitive lineage2.2.1 None
ERR3439294 Other lineage4.9 None
ERR3468549 Sensitive lineage4.9 None
ERR3468754 Sensitive lineage4.9 None
ERR387051 HR-TB None
ERR405191 Other lineage4.9 None
ERR405216 Sensitive lineage3.1.1 None
ERR405209 Sensitive lineage4 None
ERR4178161 Other lineage4.4.1.1 None
ERR405222 Sensitive lineage4;lineage3.1 None
ERR4188072 Other lineage4.9;La1.8.1 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4188158 Other lineage4.9 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR4586795 Other La1.8.1 None
ERR473311 Sensitive lineage4.9 None
ERR473279 Other lineage4.9 None
ERR4769453 Other La1.3 None
ERR473340 Sensitive lineage1.1.2 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769539 Sensitive lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769514 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769517 Other La1.3 None
ERR5865066 MDR-TB lineage4.8 None
ERR4811101 Other lineage4.4.2 None
ERR5864927 MDR-TB lineage2.2.1 None
ERR5865065 MDR-TB lineage4.8 None
ERR5865230 MDR-TB lineage2.2.1 None
ERR6197036 Other lineage4 None
ERR5979817 Sensitive lineage4.9 None
ERR5987400 MDR-TB lineage2.2.1.1 None
ERR5979787 Other lineage4.9 None
ERR6197025 Other lineage4.7 None
ERR6865446 Other lineage4.4.1.1 None
ERR2124091 Pre-XDR-TB lineage4.3.4.2 None
ERR736825 Sensitive lineage4.9 None
ERR751414 MDR-TB lineage4 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR736850 Sensitive lineage4.9 None
ERR2124090 MDR-TB lineage2.2.1 None
ERR2124088 Other lineage4.4.1.1 None
ERR970453 RR-TB lineage4.1.2 None
ERR909753 Other lineage5.1.1 None
ERR1873557 Pre-XDR-TB lineage2.2.1 None
ERR1873445 MDR-TB lineage2.2.1 None
ERR773804 Sensitive lineage4.9 None
ERR8665619 Pre-XDR-TB lineage2.2.1 None
ERR9117747 HR-TB lineage4.8 None
ERR970455 RR-TB lineage4.1.2 None
SRR1002681 HR-TB lineage4.1 None
ERR970457 RR-TB lineage4.1.1.3 None
ERR972802 RR-TB lineage4.1.1.3 None
ERR970458 RR-TB lineage4.1.1.3 None
ERR972801 RR-TB lineage2.2.1.1 None
SRR1013530 HR-TB lineage4.9 None
SRR1062868 HR-TB lineage4.9 None
SRR10315558 Sensitive lineage2.2.1 None
SRR11342635 MDR-TB lineage4.8 None
SRR1062869 Pre-XDR-TB lineage4.9 None
SRR1166181 MDR-TB lineage4 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1165236 Pre-XDR-TB lineage2.2 None
SRR1169591 Sensitive lineage1.1.2 None
SRR1167264 Pre-XDR-TB lineage2.2 None
SRR1168955 MDR-TB lineage4.9;lineage4.2.1 None
SRR1172282 Other lineage4.9 None
SRR1172086 Sensitive lineage1.1.2 None
SRR1172125 HR-TB lineage1.1.2 None
SRR1172293 Sensitive lineage1.1.2 None
SRR1172751 HR-TB lineage3.1.2.1 None
SRR1172706 Sensitive lineage2.2.1 None
SRR1172861 MDR-TB lineage3 None
SRR1172798 Sensitive lineage2.2.1 None
SRR1172832 Sensitive lineage2.2.1 None
SRR1173105 MDR-TB lineage3 None
SRR1172874 Sensitive lineage2.2.1 None
SRR1173014 MDR-TB lineage3 None
SRR1173045 Sensitive lineage3 None
SRR1173174 Pre-XDR-TB lineage2.2.2 None
SRR1173139 Sensitive lineage4.9 None
SRR1173117 Sensitive lineage1.1.2 None
SRR1173269 Sensitive lineage4.9 None
SRR1173310 MDR-TB None
SRR1173335 Sensitive lineage4.9 None
SRR1173343 Pre-XDR-TB lineage2.2.1 None
SRR1173344 Sensitive lineage4.6.1.1 None
SRR1173380 Pre-XDR-TB lineage3;lineage2.2 None
SRR1173377 Pre-XDR-TB lineage2.2.2 None
SRR1173367 MDR-TB lineage3 None
SRR1173421 RR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173445 Sensitive lineage3 None
SRR1173508 Sensitive lineage4.9 None
SRR1173686 MDR-TB lineage3 None
SRR1173621 MDR-TB lineage3 None
SRR1173705 Other lineage4.9 None
SRR1173704 Sensitive lineage4.6.1.1 None
SRR1173719 HR-TB lineage3 None
SRR1173768 Sensitive lineage4.9 None
SRR1173727 MDR-TB lineage3 None
SRR1173766 Sensitive lineage4.9 None
SRR1173764 Sensitive lineage4.9 None
SRR1173773 Sensitive lineage2.2.1 None
SRR1173800 Pre-XDR-TB lineage3;lineage2.2 None
SRR1173865 Sensitive lineage4.9 None
SRR1173833 Other lineage4.9 None
SRR1174277 Pre-XDR-TB lineage2.2.1 None
SRR1175053 Other lineage1.2.1.2.1 None
SRR1175107 Sensitive lineage2.2.1 None
SRR1196545 HR-TB lineage4.9 None
SRR1175135 Sensitive lineage1.2.2.2 None
SRR1180294 Sensitive lineage1.1.2 None
SRR1180487 Sensitive lineage1.1.2 None
SRR1175105 MDR-TB lineage3 None
SRR1175131 Sensitive lineage2.2.1 None
SRR1175165 Sensitive lineage2.2.1 None
SRR1180479 Other lineage1.1.2 None
SRR1184308 Sensitive lineage4.9 None
SRR12006082 Sensitive lineage4.9 None
SRR12006076 Sensitive lineage4.9 None
SRR12006075 Sensitive lineage4.9 None
SRR12006067 Sensitive lineage4.9 None
SRR12006077 Sensitive lineage4.9 None
SRR12006056 Sensitive lineage4.9 None
SRR12006068 Sensitive lineage4.9 None
SRR12006088 Sensitive lineage4.9 None
SRR12006070 Sensitive lineage4.9 None
SRR12634543 Sensitive lineage4.8 None
SRR12006097 Sensitive lineage4.9 None
SRR12006102 Sensitive lineage4.9 None
SRR12006090 Sensitive lineage4.9 None
SRR12006091 Sensitive lineage4.9 None
SRR12006095 Sensitive lineage4.9 None
SRR12006098 Sensitive lineage4.9 None
SRR13591376 Sensitive lineage4.3.2 None
SRR13591377 Sensitive lineage4.1.1.3 None
SRR13861421 Other lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR14782555 Pre-XDR-TB lineage2.2.1 None
SRR14334195 Pre-XDR-TB lineage2.2.1 None
SRR19303931 Other lineage2.2.1 None
SRR15315833 Sensitive lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR22424765 MDR-TB lineage4 None
SRR20969475 Other lineage1.2.1.2 None
SRR21277490 Sensitive lineage4.5 None
ERR4815257 HR-TB lineage4.4.1.1 None
SRR22424919 MDR-TB lineage1.1.2 None
SRR1723899 Sensitive lineage4.5 cn
SAMN02599090 MDR-TB lineage3 None
SAMN02599131 MDR-TB lineage3 None