EBG00000313325 - n.1357C>T
Drug resistance types
140 Sensitive
7 RR-TB
10 HR-TB
28 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.2 | 2 |
| lineage3.1.1 | 4 |
| lineage4.8 | 8 |
| lineage4.9 | 79 |
| lineage3 | 16 |
| lineage4.1.1.3 | 7 |
| lineage2.2.1 | 30 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.3.3 | 3 |
| lineage1.1.2 | 11 |
| lineage2.2.1;lineage4.2.1 | 1 |
| lineage4.2.1 | 4 |
| lineage4.4.1.1 | 5 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.2.1.1 | 2 |
| lineage4.5 | 5 |
| lineage2.2.2 | 6 |
| lineage5.1.1 | 1 |
| lineage4.6.1.1 | 6 |
| lineage1.2.2.2 | 4 |
| lineage4.1.2.1 | 6 |
| lineage3.1 | 1 |
| lineage4.9.1 | 3 |
| lineage4.6.3 | 1 |
| lineage1.2.1.2 | 3 |
| lineage1.1.3.1 | 2 |
| lineage6.1.3 | 1 |
| lineage2.2;lineage3 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.1.2 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3.1;lineage4 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 1 |
| La1.8.1 | 2 |
| lineage4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.9;lineage7 | 2 |
| La1.3 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 253 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR12634543 | Sensitive | lineage4.8 | None | ERR11465830 | Sensitive | lineage4.9 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7443794 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR11465777 | Sensitive | lineage4.1.1.3 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR405191 | Sensitive | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | SRR1174277 | HR-TB | lineage2.2.1 | None | SRR1175107 | Sensitive | lineage2.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | SRR6896576 | Sensitive | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR3283033 | Sensitive | lineage4.9 | None | SRR1172125 | HR-TB | lineage1.1.2 | None | SRR5152926 | MDR-TB | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | SRR7755705 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR7443753 | Sensitive | lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SAMN02599073 | Sensitive | lineage2.2.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | DRR474071 | Sensitive | lineage4.5 | None | SRR12006067 | Sensitive | lineage4.9 | None | SRR1183400 | Sensitive | lineage4.9 | None | SRR1169591 | Sensitive | lineage1.1.2 | None | ERR164004 | Sensitive | lineage4.9 | None | ERR4818272 | Other | lineage4.3.2 | None | SAMN02403473 | Pre-XDR-TB | lineage2.2.2 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | ERR1140774 | Sensitive | lineage5.1.1 | None | SRR1172832 | Sensitive | lineage2.2.1 | None | SAMN02567670 | Sensitive | lineage4.6.1.1 | None | SRR1183023 | Sensitive | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | SRR1175135 | Sensitive | lineage1.2.2.2 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR1140781 | Sensitive | lineage3.1 | None | SAMN02599089 | MDR-TB | lineage3 | None | SRR1173367 | MDR-TB | lineage3 | None | ERR1140783 | Sensitive | lineage2.2.2 | None | ERR126611 | Sensitive | lineage4.9.1 | None | SRR12006091 | Sensitive | lineage4.9 | None | SRR12006077 | Sensitive | lineage4.9 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SAMN02598990 | Sensitive | lineage1.1.2 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | SRR7755733 | MDR-TB | lineage4.3.3 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR1196545 | Sensitive | lineage4.9 | None | ERR405217 | Sensitive | lineage2.2.1 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR29126356 | Sensitive | lineage1.1.3.1 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR1173344 | Sensitive | lineage4.6.1.1 | None | ERR4820484 | Sensitive | lineage4.8 | None | ERR4814623 | Sensitive | lineage4.8 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR405216 | Sensitive | lineage3.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR7443756 | Sensitive | lineage4.9 | None | ERR5865065 | MDR-TB | lineage4.8 | None | SRR1173380 | Pre-XDR-TB | lineage2.2;lineage3 | None | SRR1180294 | Sensitive | lineage1.1.2 | None | SRR1238558 | Other | lineage4.9 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1180479 | Sensitive | lineage1.1.2 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | ERR1140791 | Sensitive | lineage1.2.1.2 | None | SRR1175053 | Other | lineage1.2.1.2.1 | None | SRR1180487 | Sensitive | lineage1.1.2 | None | SAMN02599067 | Sensitive | lineage2.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4820161 | Other | lineage3 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1165236 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR6045642 | Other | lineage3.1.2.2 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR21277490 | Sensitive | lineage4.5 | None | SRR7443776 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173445 | Sensitive | lineage3 | None | SRR12006076 | Sensitive | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR736825 | Sensitive | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR1168955 | Sensitive | lineage4.2;lineage4.9 | None | SRR1173014 | MDR-TB | lineage3 | None | ERR970455 | RR-TB | lineage4.1.2 | None | SRR7443739 | Sensitive | lineage4.9 | None | SRR7069473 | Other | lineage4.1.1.2 | None | ERR473311 | Sensitive | lineage4.9 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | SRR1183210 | Sensitive | lineage4.9 | None | SRR12006068 | Sensitive | lineage4.9 | None | SRR7443762 | Sensitive | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SAMN02599131 | MDR-TB | lineage3 | None | SRR7535074 | Sensitive | lineage3 | None | SRR1172874 | Sensitive | lineage2.2.1 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR1167264 | Pre-XDR-TB | lineage2.2.2 | None | ERR323067 | Sensitive | lineage4.3.4.2.1 | None | ERR11465776 | Sensitive | lineage4.1.1.3 | None | SRR1172086 | Sensitive | lineage1.1.2 | None | SRR1183419 | Sensitive | lineage4.9 | None | SRR7535073 | Sensitive | lineage4.6.1.1 | None | SRR7443791 | Sensitive | lineage4.9 | None | SRR1175105 | MDR-TB | lineage3 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013532 | Sensitive | lineage4.3.2;lineage4.9 | None | SRR9971296 | MDR-TB | lineage4.8 | None | SRR1173768 | Sensitive | lineage4.9 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR1173515 | Sensitive | lineage4.9 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR1140785 | Sensitive | lineage1.1.2 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6046152 | Other | lineage4.9 | None | SRR7443752 | Sensitive | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1062869 | Sensitive | lineage4.9.1 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | SRR12006098 | Sensitive | lineage4.9 | None | SRR1173335 | Sensitive | lineage4.9 | None | SAMN02599130 | MDR-TB | lineage3 | None | SRR1173174 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987400 | MDR-TB | lineage2.2.1.1 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | ERR4816417 | Other | lineage4.9 | None | SAMN02599090 | MDR-TB | lineage3 | None | SRR1013530 | Other | lineage4.9.1 | None | SRR7535080 | Sensitive | lineage4.8 | None | SRR6046250 | Other | lineage4.9 | None | SRR6855896 | Other | lineage4.3.4.2.1 | None | ERR970453 | RR-TB | lineage4.1.2 | None | ERR4769516 | Sensitive | lineage4.9 | None | SRR1173377 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173766 | Sensitive | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR1175131 | Sensitive | lineage2.2.1 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1173621 | MDR-TB | lineage3 | None | ERR405222 | Sensitive | lineage3.1;lineage4 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR12006070 | Sensitive | lineage4.9 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | ERR1140771 | Sensitive | lineage2.2.1 | None | SRR1062868 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR1238557 | Other | lineage4.9 | None | SRR7443748 | Sensitive | lineage4.9 | None | SRR1172706 | Sensitive | lineage2.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR12006082 | Sensitive | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR12420628 | MDR-TB | lineage2.2.1 | None | SAMN02599052 | Sensitive | lineage2.2.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR7443727 | Sensitive | lineage4.9 | None | SRR7443740 | Sensitive | lineage4.9 | None | SRR1173704 | Sensitive | lineage4.6.1.1 | None | SRR12006090 | Sensitive | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | SAMN02599071 | Sensitive | lineage3 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR7645853 | MDR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR245790 | Sensitive | lineage4.3.4.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR7443741 | Sensitive | lineage4.9 | None | SRR12006095 | Sensitive | lineage4.9 | None | SRR12006102 | Sensitive | lineage4.9 | None | SRR7443736 | Sensitive | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4816702 | Other | lineage4.6.2.2 | None | ERR1140772 | Sensitive | lineage1.2.1.2 | None | SRR12006097 | Sensitive | lineage4.9 | None | ERR4586795 | Other | La1.8.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR5865230 | MDR-TB | lineage2.2.1 | None | ERR751414 | MDR-TB | lineage4 | None | SRR7443743 | Sensitive | lineage4.9 | None | ERR2124088 | Other | lineage4.4.1.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1173421 | Other | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR7131114 | Other | lineage4.1.2 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR2179662 | Sensitive | lineage4.5 | cn | ERR970458 | RR-TB | lineage4.1.1.3 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4769517 | Other | La1.3 | None | SRR1184308 | Sensitive | lineage4.9 | None | SAMN02599091 | Sensitive | lineage1.2.2.2 | None | SRR5341346 | Sensitive | lineage3 | None | SRR7443737 | Sensitive | lineage4.9 | None | SAMN02599072 | Sensitive | lineage2.2.1 | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR12006056 | Sensitive | lineage4.9 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR1173117 | Sensitive | lineage1.1.2 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR11342635 | MDR-TB | lineage4.8 | None | ERR1023509 | Other | lineage4.9 | None | SAMN02599017 | Sensitive | lineage2.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR1173105 | MDR-TB | lineage3 | None | SRR12006075 | Sensitive | lineage4.9 | None | ERR4178161 | Other | lineage4.4.1.1 | None | SRR5152904 | Other | lineage2.2.1 | None | SRR1172293 | Sensitive | lineage1.1.2 | None | SRR6045162 | Sensitive | lineage4.9 | None | SRR12006088 | Sensitive | lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | SRR7443749 | Sensitive | lineage4.9 | None | SRR6824491 | RR-TB | lineage4.5 | cn | SRR7443723 | Sensitive | lineage4.9 | None | SRR1172798 | Sensitive | lineage2.2.1 | None | ERR4769514 | Other | La1.3 | None | ERR11465579 | Sensitive | lineage4.3.4.1 | None | SRR1723899 | Sensitive | lineage4.5 | cn | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR4815517 | Other | lineage1.2.2.2 | None | SRR10808730 | Other | lineage4.9 | None | SRR1166181 | Sensitive | lineage4.2.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR2747617 | Sensitive | La1.8.1 | None | ERR4811101 | Other | lineage4.4.2 | None |
|---|
